RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeastyeast

Gene PSF1, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSF1YDR013W TSC11P40061 1430 aa4.46□□□□□ -1.7
PSF1YDR013W SSM4P40318 1319 aa4.46□□□□□ -1.7
PSF1YDR013W OPT2Q06593 877 aa4.45□□□□□ -1.7
PSF1YDR013W BUD21Q08492 214 aaPredicted RBP4.45□□□□□ -1.7
PSF1YDR013W RGR1P19263 1082 aa4.44□□□□□ -1.7
PSF1YDR013W HPF1Q05164 967 aa4.44□□□□□ -1.7
PSF1YDR013W CDC25P04821 1589 aa4.44□□□□□ -1.7
PSF1YDR013W NOP2P40991 618 aaKnown RBP4.43□□□□□ -1.7
PSF1YDR013W MSB3P48566 633 aaPredicted RBP4.43□□□□□ -1.7
PSF1YDR013W AGE1Q04412 482 aa4.43□□□□□ -1.7
PSF1YDR013W YIR007WP40566 764 aa4.42□□□□□ -1.7
PSF1YDR013W REF2P42073 533 aaPredicted RBP4.42□□□□□ -1.7
PSF1YDR013W TY2B-LR1P0C2J3 1770 aa4.42□□□□□ -1.7
PSF1YDR013W TY2B-FP0CX63 1770 aa4.42□□□□□ -1.7
PSF1YDR013W TY2B-GR2P0CX64 1770 aa4.42□□□□□ -1.7
PSF1YDR013W TY2B-CP25384 1770 aa4.42□□□□□ -1.7
PSF1YDR013W TY2B-DR2Q03494 1770 aa4.42□□□□□ -1.7
PSF1YDR013W TY1B-DR1Q03855 1755 aa4.42□□□□□ -1.7
PSF1YDR013W TY2B-DR3Q07791 1770 aaKnown RBP4.42□□□□□ -1.7
PSF1YDR013W TY2B-OR1Q12113 1770 aa4.42□□□□□ -1.7
PSF1YDR013W TY2B-DR1Q12472 1770 aa4.42□□□□□ -1.7
PSF1YDR013W TY2B-OR2Q12501 1770 aa4.42□□□□□ -1.7
PSF1YDR013W ESC1Q03661 1658 aaKnown RBP4.41□□□□□ -1.7
PSF1YDR013W LEU3P08638 886 aa4.41□□□□□ -1.7
PSF1YDR013W TUB4P53378 473 aa4.41□□□□□ -1.7
PSF1YDR013W GEA2P39993 1459 aaKnown RBP4.41□□□□□ -1.7
PSF1YDR013W SEC3P33332 1336 aaKnown RBP4.41□□□□□ -1.7
PSF1YDR013W CAT8P39113 1433 aa4.4□□□□□ -1.7
PSF1YDR013W SCT1P32784 759 aa4.4□□□□□ -1.71
PSF1YDR013W ENP1P38333 483 aaKnown RBP4.4□□□□□ -1.71
PSF1YDR013W MET10P39692 1035 aa4.4□□□□□ -1.71
PSF1YDR013W ORC1P54784 914 aaPredicted RBP4.4□□□□□ -1.71
PSF1YDR013W TY1B-DR3Q99231 1755 aa4.4□□□□□ -1.71
PSF1YDR013W VPS15P22219 1454 aa4.39□□□□□ -1.71
PSF1YDR013W PTK2P47116 818 aaKnown RBP4.39□□□□□ -1.71
PSF1YDR013W TY2B-BQ12491 1770 aa4.39□□□□□ -1.71
PSF1YDR013W ULS1Q08562 1619 aa4.39□□□□□ -1.71
PSF1YDR013W SRB8P25648 1427 aa4.38□□□□□ -1.71
PSF1YDR013W LSB3P43603 459 aaKnown RBP4.38□□□□□ -1.71
PSF1YDR013W YLR346CQ06139 101 aa4.38□□□□□ -1.71
PSF1YDR013W UGA3P26370 528 aa4.37□□□□□ -1.71
PSF1YDR013W NUP159P40477 1460 aa4.37□□□□□ -1.71
PSF1YDR013W GLY1P37303 387 aaKnown RBP4.36□□□□□ -1.71
PSF1YDR013W ICP55P40051 511 aa4.36□□□□□ -1.71
PSF1YDR013W NUP157P40064 1391 aaKnown RBP4.36□□□□□ -1.71
PSF1YDR013W DNF1P32660 1571 aa4.36□□□□□ -1.71
PSF1YDR013W NTE1Q04958 1679 aa4.35□□□□□ -1.71
PSF1YDR013W COX6P00427 148 aa4.35□□□□□ -1.71
PSF1YDR013W SRF1Q12516 437 aa4.35□□□□□ -1.71
PSF1YDR013W SCW11P53189 542 aa4.34□□□□□ -1.71
PSF1YDR013W PUS1Q12211 544 aaKnown RBP4.34□□□□□ -1.71
PSF1YDR013W TY1A-BLQ12266 440 aa4.34□□□□□ -1.71
PSF1YDR013W SPT7P35177 1332 aa4.34□□□□□ -1.71
PSF1YDR013W SNT2P53127 1403 aa4.34□□□□□ -1.71
PSF1YDR013W TY1B-HO13535 1793 aa4.34□□□□□ -1.71
PSF1YDR013W TY1B-DR5P0C2I2 1755 aa4.34□□□□□ -1.71
PSF1YDR013W TY1B-DR6P0C2I3 1755 aa4.34□□□□□ -1.71
PSF1YDR013W TY1B-LR2P0C2I5 1755 aa4.34□□□□□ -1.71
PSF1YDR013W TY1B-LR3P0C2I6 1755 aaKnown RBP4.34□□□□□ -1.71
PSF1YDR013W TY1B-PR1P0C2I9 1755 aaKnown RBP4.34□□□□□ -1.71
PSF1YDR013W TY1B-PR2P0C2J0 1756 aa4.34□□□□□ -1.71
PSF1YDR013W TY1B-PR3P0C2J1 1755 aaKnown RBP4.34□□□□□ -1.71
PSF1YDR013W TY1B-JR1P47098 1755 aa4.34□□□□□ -1.71
PSF1YDR013W TY1B-ML2Q03434 1755 aaKnown RBP4.34□□□□□ -1.71
PSF1YDR013W TY1B-ER1Q03612 1755 aa4.34□□□□□ -1.71
PSF1YDR013W TY1B-ML1Q04711 1755 aaKnown RBP4.34□□□□□ -1.71
PSF1YDR013W TY1B-GR2Q12269 1755 aa4.34□□□□□ -1.71
PSF1YDR013W TY1B-OLQ12273 1755 aa4.34□□□□□ -1.71
PSF1YDR013W TY1B-PLQ12414 1755 aaKnown RBP4.34□□□□□ -1.71
PSF1YDR013W NUP170P38181 1502 aa4.33□□□□□ -1.72
PSF1YDR013W MMS1Q06211 1407 aa4.33□□□□□ -1.72
PSF1YDR013W SYH1Q02875 849 aaKnown RBP4.33□□□□□ -1.72
PSF1YDR013W TY1B-BRQ12193 1756 aa4.32□□□□□ -1.72
PSF1YDR013W TY1B-GR3Q12316 1755 aa4.32□□□□□ -1.72
PSF1YDR013W TY1B-ORQ92393 1755 aa4.32□□□□□ -1.72
PSF1YDR013W NUP85P46673 744 aa4.32□□□□□ -1.72
PSF1YDR013W NRD1P53617 575 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
PSF1YDR013W TYW1Q08960 810 aaKnown RBP4.32□□□□□ -1.72
PSF1YDR013W MIP1P15801 1254 aa4.31□□□□□ -1.72
PSF1YDR013W NAP1P25293 417 aaKnown RBP4.31□□□□□ -1.72
PSF1YDR013W YPR204WQ08995 1032 aa4.31□□□□□ -1.72
PSF1YDR013W RPO21P04050 1733 aaKnown RBP4.31□□□□□ -1.72
PSF1YDR013W TY3B-GQ99315 1547 aa4.31□□□□□ -1.72
PSF1YDR013W BNR1P40450 1375 aa4.3□□□□□ -1.72
PSF1YDR013W YBT1P32386 1661 aa4.3□□□□□ -1.72
PSF1YDR013W TPD3P31383 635 aa4.3□□□□□ -1.72
PSF1YDR013W TAF5P38129 798 aa4.3□□□□□ -1.72
PSF1YDR013W HXT10P43581 546 aa4.3□□□□□ -1.72
PSF1YDR013W KXD1P53158 218 aa4.3□□□□□ -1.72
PSF1YDR013W YPR148CQ06523 435 aa4.3□□□□□ -1.72
PSF1YDR013W MAK21Q12176 1025 aaKnown RBP4.3□□□□□ -1.72
PSF1YDR013W ARO1P08566 1588 aaKnown RBP4.3□□□□□ -1.72
PSF1YDR013W MDJ1P35191 511 aa4.29□□□□□ -1.72
PSF1YDR013W GDB1Q06625 1536 aa4.29□□□□□ -1.72
PSF1YDR013W RPA190P10964 1664 aaKnown RBP4.29□□□□□ -1.72
PSF1YDR013W MHP1P43638 1398 aa4.28□□□□□ -1.72
PSF1YDR013W PDR10P51533 1564 aa4.28□□□□□ -1.72
PSF1YDR013W IRC20Q06554 1556 aa4.28□□□□□ -1.72
PSF1YDR013W TY1B-JR2P47100 1755 aaKnown RBP4.28□□□□□ -1.72
PSF1YDR013W TY1B-ER2Q03619 1755 aa4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms