RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C PRP40P33203 583 aaKnown RBP7.59□□□□□ -1.19
MDH3YDL078C GTT3P39996 337 aa7.59□□□□□ -1.19
MDH3YDL078C TAP42Q04372 366 aa7.59□□□□□ -1.19
MDH3YDL078C GRX4P32642 244 aa7.58□□□□□ -1.2
MDH3YDL078C MHP1P43638 1398 aa7.58□□□□□ -1.2
MDH3YDL078C COBP00163 385 aa7.57□□□□□ -1.2
MDH3YDL078C UGA2P38067 497 aa7.57□□□□□ -1.2
MDH3YDL078C YBL086CP38177 466 aa7.57□□□□□ -1.2
MDH3YDL078C NPR2P39923 615 aa7.57□□□□□ -1.2
MDH3YDL078C MEC3Q02574 474 aa7.57□□□□□ -1.2
MDH3YDL078C YLR271WQ06152 274 aa7.57□□□□□ -1.2
MDH3YDL078C ALD2P47771 506 aa7.56□□□□□ -1.2
MDH3YDL078C PDS5Q04264 1277 aa7.56□□□□□ -1.2
MDH3YDL078C SEC3P33332 1336 aaKnown RBP7.55□□□□□ -1.2
MDH3YDL078C YKR075CP36155 307 aa7.55□□□□□ -1.2
MDH3YDL078C RCR1P38212 213 aa7.55□□□□□ -1.2
MDH3YDL078C EPS1P40557 701 aa7.55□□□□□ -1.2
MDH3YDL078C LYS4P49367 693 aaPredicted RBP7.55□□□□□ -1.2
MDH3YDL078C YRF1-4O13559 1382 aa7.55□□□□□ -1.2
MDH3YDL078C SIR4P11978 1358 aa7.55□□□□□ -1.2
MDH3YDL078C SNF2P22082 1703 aa7.55□□□□□ -1.2
MDH3YDL078C BDF1P35817 686 aa7.53□□□□□ -1.2
MDH3YDL078C AUS1Q08409 1394 aa7.53□□□□□ -1.2
MDH3YDL078C HIM1Q06674 414 aa7.52□□□□□ -1.21
MDH3YDL078C SSA2P10592 639 aaKnown RBP7.51□□□□□ -1.21
MDH3YDL078C RSM7P47150 247 aa7.51□□□□□ -1.21
MDH3YDL078C FRK1Q03002 865 aaPredicted RBP7.51□□□□□ -1.21
MDH3YDL078C KAR2P16474 682 aaKnown RBP7.5□□□□□ -1.21
MDH3YDL078C ADE16P54113 591 aaKnown RBP7.5□□□□□ -1.21
MDH3YDL078C ATG13Q06628 738 aa7.5□□□□□ -1.21
MDH3YDL078C CTH1P47976 325 aa7.49□□□□□ -1.21
MDH3YDL078C SPT7P35177 1332 aa7.49□□□□□ -1.21
MDH3YDL078C RPO41P13433 1351 aaKnown RBP7.48□□□□□ -1.21
MDH3YDL078C RIM15P43565 1770 aa7.48□□□□□ -1.21
MDH3YDL078C MSB4Q12317 492 aa7.47□□□□□ -1.21
MDH3YDL078C OSM1P21375 501 aaKnown RBP7.45□□□□□ -1.22
MDH3YDL078C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.45□□□□□ -1.22not detected
MDH3YDL078C DSD1P53095 428 aa7.45□□□□□ -1.22
MDH3YDL078C CTF4Q01454 927 aa7.45□□□□□ -1.22
MDH3YDL078C INP54Q08227 384 aaKnown RBP7.45□□□□□ -1.22
MDH3YDL078C GRX1P25373 110 aaKnown RBP7.44□□□□□ -1.22
MDH3YDL078C HSP104P31539 908 aaKnown RBP7.44□□□□□ -1.22
MDH3YDL078C SIS2P36024 562 aa7.44□□□□□ -1.22
MDH3YDL078C MGA2P40578 1113 aa7.44□□□□□ -1.22
MDH3YDL078C PAP2P53632 584 aaKnown RBP7.44□□□□□ -1.22
MDH3YDL078C ALD3P54114 506 aa7.44□□□□□ -1.22
MDH3YDL078C YOR238WQ08634 303 aa7.43□□□□□ -1.22
MDH3YDL078C BUG1Q12191 341 aa7.43□□□□□ -1.22
MDH3YDL078C MST1P07236 462 aa7.42□□□□□ -1.22
MDH3YDL078C RAD4P14736 754 aa7.42□□□□□ -1.22
MDH3YDL078C YBP2P53169 641 aa7.42□□□□□ -1.22
MDH3YDL078C TRK1P12685 1235 aa7.41□□□□□ -1.22
MDH3YDL078C AKL1P38080 1108 aaKnown RBP7.41□□□□□ -1.22
MDH3YDL078C GRE2Q12068 342 aaKnown RBP7.41□□□□□ -1.22
MDH3YDL078C YBL029C-AQ3E756 94 aa7.41□□□□□ -1.22
MDH3YDL078C UTP22P53254 1237 aaPredicted RBP7.4□□□□□ -1.22
MDH3YDL078C NUP145P49687 1317 aa7.4□□□□□ -1.22
MDH3YDL078C SSA1P10591 642 aaKnown RBP7.39□□□□□ -1.23
MDH3YDL078C NST1P53935 1240 aa7.39□□□□□ -1.23
MDH3YDL078C AOS1Q06624 347 aa7.39□□□□□ -1.23
MDH3YDL078C TOS1P38288 455 aa7.37□□□□□ -1.23
MDH3YDL078C BBC1P47068 1157 aa7.37□□□□□ -1.23
MDH3YDL078C PSD2P53037 1138 aaKnown RBP7.37□□□□□ -1.23
MDH3YDL078C AI2P03876 854 aa7.36□□□□□ -1.23
MDH3YDL078C KCC4P25389 1037 aa7.36□□□□□ -1.23
MDH3YDL078C NTH2P35172 780 aa7.36□□□□□ -1.23
MDH3YDL078C SAP155P43612 1002 aa7.36□□□□□ -1.23
MDH3YDL078C RMT2Q03305 412 aa7.36□□□□□ -1.23
MDH3YDL078C CST9Q06032 482 aa7.36□□□□□ -1.23
MDH3YDL078C TUM1Q08686 304 aaKnown RBP7.36□□□□□ -1.23
MDH3YDL078C HPC2Q01448 625 aa7.35□□□□□ -1.23
MDH3YDL078C NSR1P27476 414 aaKnown RBP RIP-Chip data7.34□□□□□ -1.23not detected
MDH3YDL078C MDG1P53885 366 aa7.34□□□□□ -1.23
MDH3YDL078C IOC4Q04213 475 aa7.34□□□□□ -1.23
MDH3YDL078C RRP46P53256 223 aaPredicted RBP7.33□□□□□ -1.24
MDH3YDL078C UGA3P26370 528 aa7.32□□□□□ -1.24
MDH3YDL078C RRT14P40470 206 aa7.32□□□□□ -1.24
MDH3YDL078C NOP53Q12080 455 aaKnown RBP7.32□□□□□ -1.24
MDH3YDL078C NYV1Q12255 253 aa7.32□□□□□ -1.24
MDH3YDL078C RTR1P40084 226 aaPredicted RBP7.31□□□□□ -1.24
MDH3YDL078C VNX1P42839 908 aa7.31□□□□□ -1.24
MDH3YDL078C EAF6P47128 113 aa7.31□□□□□ -1.24
MDH3YDL078C MSN5P52918 1224 aa7.31□□□□□ -1.24
MDH3YDL078C YNL050CP53952 270 aa7.31□□□□□ -1.24
MDH3YDL078C NSE3Q05541 303 aa7.31□□□□□ -1.24
MDH3YDL078C YAP5P40574 245 aa7.3□□□□□ -1.24
MDH3YDL078C BUD27P43573 796 aaKnown RBP RIP-Chip data7.3□□□□□ -1.24not detected
MDH3YDL078C TEA1P47988 759 aa7.3□□□□□ -1.24
MDH3YDL078C ALE1Q08548 619 aa7.3□□□□□ -1.24
MDH3YDL078C PHM7Q12252 991 aa7.3□□□□□ -1.24
MDH3YDL078C CTT1P06115 562 aa7.29□□□□□ -1.24
MDH3YDL078C PRD1P25375 712 aa7.29□□□□□ -1.24
MDH3YDL078C YFR016CP43597 1233 aaKnown RBP7.29□□□□□ -1.24
MDH3YDL078C RIX7Q07844 837 aaKnown RBP7.29□□□□□ -1.24
MDH3YDL078C SSP2Q08646 371 aa7.29□□□□□ -1.24
MDH3YDL078C SER1P33330 395 aaKnown RBP7.28□□□□□ -1.24
MDH3YDL078C YKL222CP35995 705 aa7.28□□□□□ -1.24
MDH3YDL078C ERT1P38140 529 aa7.27□□□□□ -1.25
MDH3YDL078C MAM1P40065 302 aa7.27□□□□□ -1.25
MDH3YDL078C ZDS1P50111 915 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms