RNA–Protein interactions for RNA: YCR086W

CSM1, Transcript of Nucleolar protein that mediates homolog segregation during meiosis I, yeastyeast

Gene CSM1, Length 573 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM1YCR086W YMR074CQ04773 145 aa11.73□□□□□ -0.53
CSM1YCR086W INP54Q08227 384 aaKnown RBP11.73□□□□□ -0.53
CSM1YCR086W COBP00163 385 aa11.72□□□□□ -0.53
CSM1YCR086W NTH2P35172 780 aa11.72□□□□□ -0.53
CSM1YCR086W MEC3Q02574 474 aa11.72□□□□□ -0.53
CSM1YCR086W RPN11P43588 306 aaKnown RBP11.7□□□□□ -0.54
CSM1YCR086W AOS1Q06624 347 aa11.7□□□□□ -0.54
CSM1YCR086W RPP0P05317 312 aaKnown RBP11.69□□□□□ -0.54
CSM1YCR086W SUI2P20459 304 aaKnown RBP11.69□□□□□ -0.54
CSM1YCR086W TPD3P31383 635 aa11.69□□□□□ -0.54
CSM1YCR086W SAP155P43612 1002 aa11.69□□□□□ -0.54
CSM1YCR086W CTF4Q01454 927 aa11.69□□□□□ -0.54
CSM1YCR086W RTT109Q07794 436 aa11.69□□□□□ -0.54
CSM1YCR086W NUP145P49687 1317 aa11.68□□□□□ -0.54
CSM1YCR086W VPS27P40343 622 aaKnown RBP11.68□□□□□ -0.54
CSM1YCR086W OSM1P21375 501 aaKnown RBP11.67□□□□□ -0.54
CSM1YCR086W YKR075CP36155 307 aa11.66□□□□□ -0.54
CSM1YCR086W YNL050CP53952 270 aa11.66□□□□□ -0.54
CSM1YCR086W ATG13Q06628 738 aa11.66□□□□□ -0.54
CSM1YCR086W HEF3P53978 1044 aaKnown RBP11.65□□□□□ -0.54
CSM1YCR086W CDC45Q08032 650 aa11.65□□□□□ -0.54
CSM1YCR086W RVB2Q12464 471 aaKnown RBP11.65□□□□□ -0.54
CSM1YCR086W LAM6Q08001 693 aa11.63□□□□□ -0.55
CSM1YCR086W RPL17AP05740 184 aaKnown RBP11.62□□□□□ -0.55
CSM1YCR086W YBR287WP38355 427 aa11.62□□□□□ -0.55
CSM1YCR086W NPR2P39923 615 aa11.62□□□□□ -0.55
CSM1YCR086W RRT14P40470 206 aa11.62□□□□□ -0.55
CSM1YCR086W RPL17BP46990 184 aaKnown RBP11.62□□□□□ -0.55
CSM1YCR086W ZDS1P50111 915 aaKnown RBP11.62□□□□□ -0.55
CSM1YCR086W KCC4P25389 1037 aa11.61□□□□□ -0.55
CSM1YCR086W FUN12P39730 1002 aaKnown RBP11.61□□□□□ -0.55
CSM1YCR086W YJL181WP46987 611 aa11.61□□□□□ -0.55
CSM1YCR086W YBP2P53169 641 aa11.6□□□□□ -0.55
CSM1YCR086W ALE1Q08548 619 aa11.6□□□□□ -0.55
CSM1YCR086W PRP40P33203 583 aaKnown RBP11.59□□□□□ -0.55
CSM1YCR086W MAM1P40065 302 aa11.58□□□□□ -0.56
CSM1YCR086W COQ4O13525 335 aa11.57□□□□□ -0.56
CSM1YCR086W UBP1P25037 809 aa11.57□□□□□ -0.56
CSM1YCR086W UGA3P26370 528 aa11.57□□□□□ -0.56
CSM1YCR086W GYP7P48365 746 aa11.57□□□□□ -0.56
CSM1YCR086W TUM1Q08686 304 aaKnown RBP11.57□□□□□ -0.56
CSM1YCR086W BMS1Q08965 1183 aaKnown RBP11.57□□□□□ -0.56
CSM1YCR086W LYS4P49367 693 aaPredicted RBP11.56□□□□□ -0.56
CSM1YCR086W NSE3Q05541 303 aa11.56□□□□□ -0.56
CSM1YCR086W RIM15P43565 1770 aa11.54□□□□□ -0.56
CSM1YCR086W GRX1P25373 110 aaKnown RBP11.53□□□□□ -0.56
CSM1YCR086W SRT1Q03175 343 aa11.52□□□□□ -0.57
CSM1YCR086W RMT2Q03305 412 aa11.52□□□□□ -0.57
CSM1YCR086W RAD4P14736 754 aa11.51□□□□□ -0.57
CSM1YCR086W CDC27P38042 758 aa11.51□□□□□ -0.57
CSM1YCR086W NAB6Q03735 1134 aaKnown RBP RIP-Chip data11.51□□□□□ -0.57not detected
CSM1YCR086W MSB4Q12317 492 aa11.51□□□□□ -0.57
CSM1YCR086W ZDS2P54786 942 aa11.5□□□□□ -0.57
CSM1YCR086W NOP53Q12080 455 aaKnown RBP11.5□□□□□ -0.57
CSM1YCR086W EDE1P34216 1381 aa11.5□□□□□ -0.57
CSM1YCR086W DAL5P15365 543 aa11.49□□□□□ -0.57
CSM1YCR086W YRB30P53107 440 aaPredicted RBP11.49□□□□□ -0.57
CSM1YCR086W GRE2Q12068 342 aaKnown RBP11.49□□□□□ -0.57
CSM1YCR086W CTH1P47976 325 aa11.47□□□□□ -0.57
CSM1YCR086W YOL057WQ08225 711 aa11.47□□□□□ -0.57
CSM1YCR086W LYS2P07702 1392 aa11.46□□□□□ -0.57
CSM1YCR086W YIL092WP40497 633 aa11.46□□□□□ -0.57
CSM1YCR086W BUD27P43573 796 aaKnown RBP RIP-Chip data11.45□□□□□ -0.58not detected
CSM1YCR086W YBL086CP38177 466 aa11.44□□□□□ -0.58
CSM1YCR086W VPS64Q03944 604 aa11.44□□□□□ -0.58
CSM1YCR086W MAK21Q12176 1025 aaKnown RBP11.44□□□□□ -0.58
CSM1YCR086W RAD2P07276 1031 aa11.43□□□□□ -0.58
CSM1YCR086W APL2P36000 726 aaPredicted RBP11.43□□□□□ -0.58
CSM1YCR086W TEA1P47988 759 aa11.43□□□□□ -0.58
CSM1YCR086W YGR122WP53272 402 aa11.43□□□□□ -0.58
CSM1YCR086W SSP2Q08646 371 aa11.42□□□□□ -0.58
CSM1YCR086W YGL082WP53155 381 aa11.41□□□□□ -0.58
CSM1YCR086W PHM7Q12252 991 aa11.41□□□□□ -0.58
CSM1YCR086W NYV1Q12255 253 aa11.41□□□□□ -0.58
CSM1YCR086W SSA2P10592 639 aaKnown RBP11.4□□□□□ -0.58
CSM1YCR086W SER1P33330 395 aaKnown RBP11.4□□□□□ -0.58
CSM1YCR086W ALD2P47771 506 aa11.4□□□□□ -0.58
CSM1YCR086W YDR306CQ06640 478 aa11.4□□□□□ -0.58
CSM1YCR086W BUG1Q12191 341 aa11.4□□□□□ -0.58
CSM1YCR086W DCD1P06773 312 aa11.39□□□□□ -0.59
CSM1YCR086W MRP7P12687 371 aa11.39□□□□□ -0.59
CSM1YCR086W ARG8P18544 423 aa11.39□□□□□ -0.59
CSM1YCR086W YPP1P46951 817 aa11.39□□□□□ -0.59
CSM1YCR086W UBP10P53874 792 aaPredicted RBP11.39□□□□□ -0.59
CSM1YCR086W CSI1Q04368 295 aa11.39□□□□□ -0.59
CSM1YCR086W YPR204WQ08995 1032 aa11.39□□□□□ -0.59
CSM1YCR086W RAD24P32641 659 aa11.38□□□□□ -0.59
CSM1YCR086W BDF1P35817 686 aa11.38□□□□□ -0.59
CSM1YCR086W MDG1P53885 366 aa11.38□□□□□ -0.59
CSM1YCR086W SWI1P09547 1314 aa11.37□□□□□ -0.59
CSM1YCR086W TRP5P00931 707 aaKnown RBP11.37□□□□□ -0.59
CSM1YCR086W SWC3P31376 625 aa11.37□□□□□ -0.59
CSM1YCR086W NUP133P36161 1157 aa11.37□□□□□ -0.59
CSM1YCR086W YFR016CP43597 1233 aaKnown RBP11.37□□□□□ -0.59
CSM1YCR086W DNM1P54861 757 aa11.37□□□□□ -0.59
CSM1YCR086W UGA2P38067 497 aa11.36□□□□□ -0.59
CSM1YCR086W CST6P40535 587 aa11.36□□□□□ -0.59
CSM1YCR086W NOP8Q08287 484 aaPredicted RBP11.36□□□□□ -0.59
CSM1YCR086W CTI6Q08923 506 aa11.36□□□□□ -0.59
CSM1YCR086W GTT3P39996 337 aa11.35□□□□□ -0.59
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms