RNA–Protein interactions for RNA: YCL034W

LSB5, Transcript of Protein of unknown function, yeastyeast

Gene LSB5, Length 1,065 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB5YCL034W RCR1P38212 213 aa11.74□□□□□ -0.53
LSB5YCL034W NOP2P40991 618 aaKnown RBP11.74□□□□□ -0.53
LSB5YCL034W CTF4Q01454 927 aa11.74□□□□□ -0.53
LSB5YCL034W DSD1P53095 428 aa11.73□□□□□ -0.53
LSB5YCL034W AKL1P38080 1108 aaKnown RBP11.72□□□□□ -0.53
LSB5YCL034W BUB1P41695 1021 aaKnown RBP RIP-Chip data11.72□□□□□ -0.53not detected
LSB5YCL034W RTR1P40084 226 aaPredicted RBP11.71□□□□□ -0.53
LSB5YCL034W YRF1-4O13559 1382 aa11.7□□□□□ -0.54
LSB5YCL034W DOT5P40553 215 aa11.7□□□□□ -0.54
LSB5YCL034W RRP46P53256 223 aaPredicted RBP11.7□□□□□ -0.54
LSB5YCL034W RPP0P05317 312 aaKnown RBP11.68□□□□□ -0.54
LSB5YCL034W HSP104P31539 908 aaKnown RBP11.68□□□□□ -0.54
LSB5YCL034W RIM15P43565 1770 aa11.68□□□□□ -0.54
LSB5YCL034W FOX2Q02207 900 aaKnown RBP11.67□□□□□ -0.54
LSB5YCL034W LAM6Q08001 693 aa11.67□□□□□ -0.54
LSB5YCL034W MGA2P40578 1113 aa11.66□□□□□ -0.54
LSB5YCL034W AOS1Q06624 347 aa11.66□□□□□ -0.54
LSB5YCL034W UBP1P25037 809 aa11.65□□□□□ -0.54
LSB5YCL034W PRD1P25375 712 aa11.65□□□□□ -0.54
LSB5YCL034W ADE16P54113 591 aaKnown RBP11.65□□□□□ -0.54
LSB5YCL034W PRP40P33203 583 aaKnown RBP11.64□□□□□ -0.55
LSB5YCL034W YJL181WP46987 611 aa11.64□□□□□ -0.55
LSB5YCL034W YDL144CQ07589 356 aa11.64□□□□□ -0.55
LSB5YCL034W INP54Q08227 384 aaKnown RBP11.64□□□□□ -0.55
LSB5YCL034W FRK1Q03002 865 aaPredicted RBP11.63□□□□□ -0.55
LSB5YCL034W ATG13Q06628 738 aa11.63□□□□□ -0.55
LSB5YCL034W COBP00163 385 aa11.62□□□□□ -0.55
LSB5YCL034W NTH2P35172 780 aa11.62□□□□□ -0.55
LSB5YCL034W RPN11P43588 306 aaKnown RBP11.62□□□□□ -0.55
LSB5YCL034W BUD31P25337 157 aaPredicted RBP11.61□□□□□ -0.55
LSB5YCL034W BCH2P36122 765 aa11.61□□□□□ -0.55
LSB5YCL034W VPS27P40343 622 aaKnown RBP11.61□□□□□ -0.55
LSB5YCL034W YNL050CP53952 270 aa11.61□□□□□ -0.55
LSB5YCL034W NUP145P49687 1317 aa11.6□□□□□ -0.55
LSB5YCL034W MPP10P47083 593 aaKnown RBP11.6□□□□□ -0.55
LSB5YCL034W OSM1P21375 501 aaKnown RBP11.59□□□□□ -0.55
LSB5YCL034W YKR075CP36155 307 aa11.59□□□□□ -0.55
LSB5YCL034W AI2P03876 854 aa11.58□□□□□ -0.56
LSB5YCL034W KCC4P25389 1037 aa11.58□□□□□ -0.56
LSB5YCL034W UGA3P26370 528 aa11.58□□□□□ -0.56
LSB5YCL034W CDC45Q08032 650 aa11.58□□□□□ -0.56
LSB5YCL034W MAM1P40065 302 aa11.57□□□□□ -0.56
LSB5YCL034W THI22Q06490 572 aa11.57□□□□□ -0.56
LSB5YCL034W YFR016CP43597 1233 aaKnown RBP11.56□□□□□ -0.56
LSB5YCL034W GRX1P25373 110 aaKnown RBP11.55□□□□□ -0.56
LSB5YCL034W ZDS1P50111 915 aaKnown RBP11.55□□□□□ -0.56
LSB5YCL034W YRB30P53107 440 aaPredicted RBP11.55□□□□□ -0.56
LSB5YCL034W YBP2P53169 641 aa11.55□□□□□ -0.56
LSB5YCL034W NSE3Q05541 303 aa11.55□□□□□ -0.56
LSB5YCL034W CST9Q06032 482 aa11.55□□□□□ -0.56
LSB5YCL034W LYS2P07702 1392 aa11.54□□□□□ -0.56
LSB5YCL034W NSR1P27476 414 aaKnown RBP RIP-Chip data11.53□□□□□ -0.56 RIP-Chip
LSB5YCL034W NPR2P39923 615 aa11.53□□□□□ -0.56
LSB5YCL034W PRS1P32895 427 aaKnown RBP11.52□□□□□ -0.57
LSB5YCL034W SAP155P43612 1002 aa11.52□□□□□ -0.57
LSB5YCL034W TPD3P31383 635 aa11.51□□□□□ -0.57
LSB5YCL034W GTT3P39996 337 aa11.51□□□□□ -0.57
LSB5YCL034W HEF3P53978 1044 aaKnown RBP11.51□□□□□ -0.57
LSB5YCL034W RMT2Q03305 412 aa11.51□□□□□ -0.57
LSB5YCL034W RTT109Q07794 436 aa11.51□□□□□ -0.57
LSB5YCL034W MSB4Q12317 492 aa11.51□□□□□ -0.57
LSB5YCL034W GYP7P48365 746 aa11.5□□□□□ -0.57
LSB5YCL034W SUI2P20459 304 aaKnown RBP11.49□□□□□ -0.57
LSB5YCL034W MDG1P53885 366 aa11.49□□□□□ -0.57
LSB5YCL034W RAD4P14736 754 aa11.47□□□□□ -0.57
LSB5YCL034W ALD2P47771 506 aa11.47□□□□□ -0.57
LSB5YCL034W RRT14P40470 206 aa11.46□□□□□ -0.57
LSB5YCL034W BBC1P47068 1157 aa11.46□□□□□ -0.57
LSB5YCL034W ALE1Q08548 619 aa11.46□□□□□ -0.57
LSB5YCL034W BMS1Q08965 1183 aaKnown RBP11.46□□□□□ -0.57
LSB5YCL034W RVB2Q12464 471 aaKnown RBP11.45□□□□□ -0.58
LSB5YCL034W BDF1P35817 686 aa11.44□□□□□ -0.58
LSB5YCL034W LYS4P49367 693 aaPredicted RBP11.44□□□□□ -0.58
LSB5YCL034W NOP53Q12080 455 aaKnown RBP11.44□□□□□ -0.58
LSB5YCL034W MAK21Q12176 1025 aaKnown RBP11.44□□□□□ -0.58
LSB5YCL034W UGA2P38067 497 aa11.43□□□□□ -0.58
LSB5YCL034W EPS1P40557 701 aa11.43□□□□□ -0.58
LSB5YCL034W SSP2Q08646 371 aa11.43□□□□□ -0.58
LSB5YCL034W GRE2Q12068 342 aaKnown RBP11.43□□□□□ -0.58
LSB5YCL034W UTP10P42945 1769 aaKnown RBP11.43□□□□□ -0.58
LSB5YCL034W COQ4O13525 335 aa11.42□□□□□ -0.58
LSB5YCL034W YBL086CP38177 466 aa11.42□□□□□ -0.58
LSB5YCL034W BUG1Q12191 341 aa11.42□□□□□ -0.58
LSB5YCL034W NAB6Q03735 1134 aaKnown RBP RIP-Chip data11.41□□□□□ -0.58not detected
LSB5YCL034W TUM1Q08686 304 aaKnown RBP11.41□□□□□ -0.58
LSB5YCL034W PHM7Q12252 991 aa11.41□□□□□ -0.58
LSB5YCL034W SRT1Q03175 343 aa11.4□□□□□ -0.58
LSB5YCL034W YOL057WQ08225 711 aa11.4□□□□□ -0.58
LSB5YCL034W SSA2P10592 639 aaKnown RBP11.39□□□□□ -0.59
LSB5YCL034W UTP22P53254 1237 aaPredicted RBP11.39□□□□□ -0.59
LSB5YCL034W YBR287WP38355 427 aa11.38□□□□□ -0.59
LSB5YCL034W CTH1P47976 325 aa11.38□□□□□ -0.59
LSB5YCL034W ALD3P54114 506 aa11.38□□□□□ -0.59
LSB5YCL034W BUD27P43573 796 aaKnown RBP RIP-Chip data11.36□□□□□ -0.59not detected
LSB5YCL034W TEA1P47988 759 aa11.35□□□□□ -0.59
LSB5YCL034W DNM1P54861 757 aa11.35□□□□□ -0.59
LSB5YCL034W RAD2P07276 1031 aa11.34□□□□□ -0.59
LSB5YCL034W SCY1P53009 804 aa11.34□□□□□ -0.59
LSB5YCL034W NYV1Q12255 253 aa11.33□□□□□ -0.6
LSB5YCL034W UBP10P53874 792 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms