RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W PAT1P25644 796 aaKnown RBP7.89□□□□□ -1.15
CKS1YBR135W TGL4P36165 910 aa7.89□□□□□ -1.15
CKS1YBR135W KXD1P53158 218 aa7.89□□□□□ -1.15
CKS1YBR135W SRC1Q03707 834 aa7.89□□□□□ -1.15
CKS1YBR135W YML020WQ03722 664 aa7.89□□□□□ -1.15
CKS1YBR135W YPR084WQ06821 456 aa7.89□□□□□ -1.15
CKS1YBR135W ISF1P32488 338 aa7.88□□□□□ -1.15
CKS1YBR135W EMP47P43555 445 aa7.88□□□□□ -1.15
CKS1YBR135W YML083CQ04526 418 aa7.88□□□□□ -1.15
CKS1YBR135W FRA1Q07825 749 aa7.88□□□□□ -1.15
CKS1YBR135W GUT2P32191 649 aa7.87□□□□□ -1.15
CKS1YBR135W SLX8P40072 274 aa7.87□□□□□ -1.15
CKS1YBR135W MRX12P47084 519 aa7.87□□□□□ -1.15
CKS1YBR135W RPL34AP87262 121 aaPredicted RBP7.87□□□□□ -1.15
CKS1YBR135W NOP8Q08287 484 aaPredicted RBP7.87□□□□□ -1.15
CKS1YBR135W TPD3P31383 635 aa7.86□□□□□ -1.15
CKS1YBR135W HXT10P43581 546 aa7.86□□□□□ -1.15
CKS1YBR135W SPT16P32558 1035 aaKnown RBP7.85□□□□□ -1.15
CKS1YBR135W STE20Q03497 939 aaKnown RBP7.85□□□□□ -1.15
CKS1YBR135W RRD1P40454 393 aaKnown RBP7.84□□□□□ -1.15
CKS1YBR135W MOD5P07884 428 aa7.83□□□□□ -1.16
CKS1YBR135W APL6P46682 809 aa7.83□□□□□ -1.16
CKS1YBR135W SAS4Q04003 481 aa7.83□□□□□ -1.16
CKS1YBR135W VAC17P25591 423 aa7.82□□□□□ -1.16
CKS1YBR135W RGA1P39083 1007 aa7.82□□□□□ -1.16
CKS1YBR135W ATG3P40344 310 aa7.82□□□□□ -1.16
CKS1YBR135W ENV9Q08651 330 aa7.82□□□□□ -1.16
CKS1YBR135W CDC3P32457 520 aaKnown RBP7.81□□□□□ -1.16
CKS1YBR135W KTR7P40504 517 aa7.81□□□□□ -1.16
CKS1YBR135W UTP13Q05946 817 aaKnown RBP7.8□□□□□ -1.16
CKS1YBR135W GYP1Q08484 637 aa7.8□□□□□ -1.16
CKS1YBR135W GAL2P13181 574 aa7.79□□□□□ -1.16
CKS1YBR135W ECM23Q02710 187 aa7.79□□□□□ -1.16
CKS1YBR135W SOH1P38633 127 aa7.77□□□□□ -1.17
CKS1YBR135W PHO87P25360 923 aa7.74□□□□□ -1.17
CKS1YBR135W UBX7P38349 436 aa7.74□□□□□ -1.17
CKS1YBR135W MRF1P30775 413 aaPredicted RBP7.73□□□□□ -1.17
CKS1YBR135W SSF1P38789 453 aaPredicted RBP7.73□□□□□ -1.17
CKS1YBR135W SDH2P21801 266 aa7.72□□□□□ -1.17
CKS1YBR135W IXR1P33417 597 aa7.72□□□□□ -1.17
CKS1YBR135W HAP4P14064 554 aa7.71□□□□□ -1.18
CKS1YBR135W YEL077CQ3E7X8 1277 aa7.71□□□□□ -1.18
CKS1YBR135W HAL5P38970 855 aaKnown RBP7.7□□□□□ -1.18
CKS1YBR135W ACS2P52910 683 aaKnown RBP7.7□□□□□ -1.18
CKS1YBR135W ITT1Q04638 464 aa7.7□□□□□ -1.18
CKS1YBR135W ISR1Q06098 443 aaKnown RBP7.69□□□□□ -1.18
CKS1YBR135W HAT1Q12341 374 aa7.69□□□□□ -1.18
CKS1YBR135W TSC13Q99190 310 aa7.69□□□□□ -1.18
CKS1YBR135W BDP1P46678 594 aa7.68□□□□□ -1.18
CKS1YBR135W ROM1P53046 1155 aa7.68□□□□□ -1.18
CKS1YBR135W GAS4Q08271 471 aa7.68□□□□□ -1.18
CKS1YBR135W KIP2P28743 706 aa7.67□□□□□ -1.18
CKS1YBR135W SLD2P34252 453 aa7.67□□□□□ -1.18
CKS1YBR135W CWC15Q03772 175 aaKnown RBP7.67□□□□□ -1.18
CKS1YBR135W PUF6Q04373 656 aaKnown RBP7.67□□□□□ -1.18
CKS1YBR135W ATG20Q07528 640 aa7.67□□□□□ -1.18
CKS1YBR135W RAS1P01119 309 aa7.66□□□□□ -1.18
CKS1YBR135W EMW1P42842 904 aaKnown RBP7.66□□□□□ -1.18
CKS1YBR135W PUS5Q06244 254 aa7.66□□□□□ -1.18
CKS1YBR135W TPS3P38426 1054 aaKnown RBP7.65□□□□□ -1.18
CKS1YBR135W CST6P40535 587 aa7.65□□□□□ -1.18
CKS1YBR135W YFL034WP43564 1073 aa7.65□□□□□ -1.18
CKS1YBR135W SYH1Q02875 849 aaKnown RBP7.65□□□□□ -1.18
CKS1YBR135W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.65□□□□□ -1.18not detected
CKS1YBR135W MIP1P15801 1254 aa7.64□□□□□ -1.19
CKS1YBR135W PDI1P17967 522 aaKnown RBP7.64□□□□□ -1.19
CKS1YBR135W AIM9P40053 627 aaKnown RBP7.63□□□□□ -1.19
CKS1YBR135W SEN54Q02825 467 aaPredicted RBP7.63□□□□□ -1.19
CKS1YBR135W HDA3Q06623 655 aa7.63□□□□□ -1.19
CKS1YBR135W APP1P53933 587 aa7.62□□□□□ -1.19
CKS1YBR135W FRK1Q03002 865 aaPredicted RBP7.62□□□□□ -1.19
CKS1YBR135W YBL113CQ7M4S9 792 aa7.61□□□□□ -1.19
CKS1YBR135W SPT2P06843 333 aaPredicted RBP7.6□□□□□ -1.19
CKS1YBR135W VAN1P23642 535 aa7.6□□□□□ -1.19
CKS1YBR135W SRS2P12954 1174 aa7.59□□□□□ -1.19
CKS1YBR135W UBP1P25037 809 aa7.59□□□□□ -1.19
CKS1YBR135W FBP26P32604 452 aa7.59□□□□□ -1.19
CKS1YBR135W MRT4P33201 236 aaKnown RBP7.59□□□□□ -1.19
CKS1YBR135W ISU1Q03020 165 aa7.59□□□□□ -1.19
CKS1YBR135W KAR5Q04746 504 aa7.59□□□□□ -1.19
CKS1YBR135W PNP1Q05788 311 aa7.59□□□□□ -1.19
CKS1YBR135W MKS1P34072 584 aa7.58□□□□□ -1.2
CKS1YBR135W NTH2P35172 780 aa7.58□□□□□ -1.2
CKS1YBR135W ERP5P38819 212 aa7.58□□□□□ -1.2
CKS1YBR135W PUN1Q06991 263 aa7.58□□□□□ -1.2
CKS1YBR135W TRS33Q99394 268 aa7.58□□□□□ -1.2
CKS1YBR135W UTR2P32623 467 aa7.57□□□□□ -1.2
CKS1YBR135W STM1P39015 273 aaKnown RBP7.57□□□□□ -1.2
CKS1YBR135W RPS6AP0CX37 236 aaKnown RBP7.56□□□□□ -1.2
CKS1YBR135W RPS6BP0CX38 236 aaPredicted RBP7.56□□□□□ -1.2
CKS1YBR135W TRL1P09880 827 aaKnown RBP7.55□□□□□ -1.2
CKS1YBR135W BOL3P39724 118 aa7.55□□□□□ -1.2
CKS1YBR135W CYT1P07143 309 aa7.54□□□□□ -1.2
CKS1YBR135W SWI5P08153 709 aa7.54□□□□□ -1.2
CKS1YBR135W SUV3P32580 737 aa7.54□□□□□ -1.2
CKS1YBR135W YBL086CP38177 466 aa7.54□□□□□ -1.2
CKS1YBR135W ALD4P46367 519 aaKnown RBP7.54□□□□□ -1.2
CKS1YBR135W ATG1P53104 897 aa7.54□□□□□ -1.2
CKS1YBR135W HED1Q03937 162 aa7.54□□□□□ -1.2
CKS1YBR135W TRK1P12685 1235 aa7.53□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms