RNA–Protein interactions for RNA: YBL014C

RRN6, Transcript of Component of the core factor (CF) rDNA transcription factor complex, yeast

Gene RRN6, Length 2,685 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRN6	YBL014C	YEF3	P16521	1044 aa	Known RBP	4.66	□□□□□ -1.66
RRN6	YBL014C	UBP14	P38237	781 aa	Known RBP	4.66	□□□□□ -1.66
RRN6	YBL014C	RRP5	Q05022	1729 aa	Known RBP	4.65	□□□□□ -1.66
RRN6	YBL014C	ADE6	P38972	1358 aa	Known RBP	4.65	□□□□□ -1.67
RRN6	YBL014C	TRK1	P12685	1235 aa		4.65	□□□□□ -1.67
RRN6	YBL014C	VMA1	P17255	1071 aa	Known RBP	4.64	□□□□□ -1.67
RRN6	YBL014C	FKS3	Q04952	1785 aa		4.64	□□□□□ -1.67
RRN6	YBL014C	THI12	P42883	340 aa		4.63	□□□□□ -1.67
RRN6	YBL014C	THI5	P43534	340 aa		4.63	□□□□□ -1.67
RRN6	YBL014C	THI11	P47183	340 aa		4.63	□□□□□ -1.67
RRN6	YBL014C	YLR326W	Q06170	240 aa	Known RBP	4.63	□□□□□ -1.67
RRN6	YBL014C	PIB1	Q06651	286 aa		4.63	□□□□□ -1.67
RRN6	YBL014C	THI13	Q07748	340 aa		4.63	□□□□□ -1.67
RRN6	YBL014C	URB1	P34241	1764 aa	Known RBP	4.63	□□□□□ -1.67
RRN6	YBL014C	AUS1	Q08409	1394 aa		4.63	□□□□□ -1.67
RRN6	YBL014C	APC1	P53886	1748 aa		4.63	□□□□□ -1.67
RRN6	YBL014C	LEU2	P04173	364 aa	Predicted RBP	4.63	□□□□□ -1.67
RRN6	YBL014C	MTR4	P47047	1073 aa	Known RBP	4.63	□□□□□ -1.67
RRN6	YBL014C	IOC4	Q04213	475 aa		4.63	□□□□□ -1.67
RRN6	YBL014C	VHR2	P40041	505 aa		4.62	□□□□□ -1.67
RRN6	YBL014C	TAP42	Q04372	366 aa		4.62	□□□□□ -1.67
RRN6	YBL014C	PDI1	P17967	522 aa	Known RBP	4.61	□□□□□ -1.67
RRN6	YBL014C	YAP5	P40574	245 aa		4.61	□□□□□ -1.67
RRN6	YBL014C	KAR2	P16474	682 aa	Known RBP	4.6	□□□□□ -1.67
RRN6	YBL014C	SOL3	P38858	249 aa		4.6	□□□□□ -1.67
RRN6	YBL014C	PRP43	P53131	767 aa	Known RBP	4.6	□□□□□ -1.67
RRN6	YBL014C	HPC2	Q01448	625 aa		4.6	□□□□□ -1.67
RRN6	YBL014C	RPP0	P05317	312 aa	Known RBP	4.6	□□□□□ -1.67
RRN6	YBL014C	RRP46	P53256	223 aa	Predicted RBP	4.6	□□□□□ -1.67
RRN6	YBL014C	HIM1	Q06674	414 aa		4.6	□□□□□ -1.67
RRN6	YBL014C	RPS24A	P0CX31	135 aa	Known RBP	4.59	□□□□□ -1.67
RRN6	YBL014C	RPS24B	P0CX32	135 aa	Known RBP	4.59	□□□□□ -1.67
RRN6	YBL014C	GUT1	P32190	709 aa		4.59	□□□□□ -1.67
RRN6	YBL014C	GRX4	P32642	244 aa		4.59	□□□□□ -1.67
RRN6	YBL014C	CSE4	P36012	229 aa		4.59	□□□□□ -1.67
RRN6	YBL014C	TGL3	P40308	642 aa		4.59	□□□□□ -1.67
RRN6	YBL014C	NOP2	P40991	618 aa	Known RBP	4.59	□□□□□ -1.67
RRN6	YBL014C	RTF1	P53064	558 aa		4.59	□□□□□ -1.67
RRN6	YBL014C	ATF2	P53296	535 aa		4.59	□□□□□ -1.67
RRN6	YBL014C	YGR273C	P53329	174 aa		4.59	□□□□□ -1.67
RRN6	YBL014C	SAM3	Q08986	587 aa		4.59	□□□□□ -1.67
RRN6	YBL014C	TFB3	Q03290	321 aa		4.59	□□□□□ -1.68
RRN6	YBL014C	YDL144C	Q07589	356 aa		4.59	□□□□□ -1.68
RRN6	YBL014C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	RIP-Chip
RRN6	YBL014C	TIF4632	P39936	914 aa	Known RBP	4.58	□□□□□ -1.68
RRN6	YBL014C	VPS27	P40343	622 aa	Known RBP	4.58	□□□□□ -1.68
RRN6	YBL014C	GRE2	Q12068	342 aa	Known RBP	4.58	□□□□□ -1.68
RRN6	YBL014C	CDC45	Q08032	650 aa		4.58	□□□□□ -1.68
RRN6	YBL014C	RPO41	P13433	1351 aa	Known RBP	4.57	□□□□□ -1.68
RRN6	YBL014C	MPP10	P47083	593 aa	Known RBP	4.57	□□□□□ -1.68
RRN6	YBL014C	ATH1	P48016	1211 aa		4.57	□□□□□ -1.68
RRN6	YBL014C	KEX1	P09620	729 aa		4.57	□□□□□ -1.68
RRN6	YBL014C	GAS4	Q08271	471 aa		4.57	□□□□□ -1.68
RRN6	YBL014C	DPS1	P04802	557 aa	Known RBP	4.56	□□□□□ -1.68
RRN6	YBL014C	RTR1	P40084	226 aa	Predicted RBP	4.56	□□□□□ -1.68
RRN6	YBL014C	SUI2	P20459	304 aa	Known RBP	4.56	□□□□□ -1.68
RRN6	YBL014C	PSE1	P32337	1089 aa	Known RBP	4.56	□□□□□ -1.68
RRN6	YBL014C	HGH1	P48362	394 aa	Known RBP	4.56	□□□□□ -1.68
RRN6	YBL014C	PAP2	P53632	584 aa	Known RBP	4.56	□□□□□ -1.68
RRN6	YBL014C	RVB2	Q12464	471 aa	Known RBP	4.56	□□□□□ -1.68
RRN6	YBL014C	MST1	P07236	462 aa		4.55	□□□□□ -1.68
RRN6	YBL014C	PKC1	P24583	1151 aa		4.55	□□□□□ -1.68
RRN6	YBL014C	BUD31	P25337	157 aa	Predicted RBP	4.55	□□□□□ -1.68
RRN6	YBL014C	ORC6	P38826	435 aa		4.55	□□□□□ -1.68
RRN6	YBL014C	YRF1-4	O13559	1382 aa		4.55	□□□□□ -1.68
RRN6	YBL014C	YRF1-3	P0CX14	1859 aa		4.54	□□□□□ -1.68
RRN6	YBL014C	YRF1-7	P0CX15	1859 aa		4.54	□□□□□ -1.68
RRN6	YBL014C	YRF1-6	P53819	1859 aa		4.54	□□□□□ -1.68
RRN6	YBL014C	PRD1	P25375	712 aa		4.54	□□□□□ -1.68
RRN6	YBL014C	THI22	Q06490	572 aa		4.54	□□□□□ -1.68
RRN6	YBL014C	KTR1	P27810	393 aa	Known RBP	4.54	□□□□□ -1.68
RRN6	YBL014C	FUN12	P39730	1002 aa	Known RBP	4.53	□□□□□ -1.68
RRN6	YBL014C	SAP155	P43612	1002 aa		4.53	□□□□□ -1.68
RRN6	YBL014C	PRP5	P21372	849 aa	Predicted RBP	4.53	□□□□□ -1.68
RRN6	YBL014C	RAD54	P32863	898 aa		4.53	□□□□□ -1.68
RRN6	YBL014C	HEF3	P53978	1044 aa	Known RBP	4.53	□□□□□ -1.68
RRN6	YBL014C	GLN1	P32288	370 aa	Known RBP	4.52	□□□□□ -1.69
RRN6	YBL014C	ILV3	P39522	585 aa	Known RBP	4.52	□□□□□ -1.69
RRN6	YBL014C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
RRN6	YBL014C	YRB30	P53107	440 aa	Predicted RBP	4.52	□□□□□ -1.69
RRN6	YBL014C	PRP45	P28004	379 aa	Predicted RBP	4.52	□□□□□ -1.69
RRN6	YBL014C	AKL1	P38080	1108 aa	Known RBP	4.52	□□□□□ -1.69
RRN6	YBL014C	MSB3	P48566	633 aa	Predicted RBP	4.52	□□□□□ -1.69
RRN6	YBL014C	SLM3	Q12093	417 aa		4.52	□□□□□ -1.69
RRN6	YBL014C	GYP5	Q12344	894 aa		4.52	□□□□□ -1.69
RRN6	YBL014C	SIR4	P11978	1358 aa		4.52	□□□□□ -1.69
RRN6	YBL014C	ROM2	P51862	1356 aa	Known RBP	4.52	□□□□□ -1.69
RRN6	YBL014C	TPD3	P31383	635 aa		4.51	□□□□□ -1.69
RRN6	YBL014C	CSN12	P47130	423 aa		4.51	□□□□□ -1.69
RRN6	YBL014C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
RRN6	YBL014C	RTT109	Q07794	436 aa		4.51	□□□□□ -1.69
RRN6	YBL014C	GAP1	P19145	602 aa	Predicted RBP	4.5	□□□□□ -1.69
RRN6	YBL014C	KIC1	P38692	1080 aa		4.5	□□□□□ -1.69
RRN6	YBL014C	SSA2	P10592	639 aa	Known RBP	4.5	□□□□□ -1.69
RRN6	YBL014C	RGR1	P19263	1082 aa		4.5	□□□□□ -1.69
RRN6	YBL014C	BRL1	P38770	471 aa		4.5	□□□□□ -1.69
RRN6	YBL014C	DSD1	P53095	428 aa		4.5	□□□□□ -1.69
RRN6	YBL014C	RIM15	P43565	1770 aa		4.5	□□□□□ -1.69
RRN6	YBL014C	RSF2	P46974	1380 aa		4.49	□□□□□ -1.69
RRN6	YBL014C	YMR074C	Q04773	145 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms