RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W MET5P47169 1442 aa4.79□□□□□ -1.64
NUP60YAR002W ARH1P48360 493 aa4.79□□□□□ -1.64
NUP60YAR002W HAP5Q02516 242 aa4.79□□□□□ -1.64
NUP60YAR002W SRC1Q03707 834 aa4.79□□□□□ -1.64
NUP60YAR002W YRR1Q12172 810 aa4.79□□□□□ -1.64
NUP60YAR002W PDR10P51533 1564 aa4.78□□□□□ -1.64
NUP60YAR002W SSA2P10592 639 aaKnown RBP4.78□□□□□ -1.64
NUP60YAR002W MET10P39692 1035 aa4.78□□□□□ -1.64
NUP60YAR002W CSN12P47130 423 aa4.78□□□□□ -1.64
NUP60YAR002W HPC2Q01448 625 aa4.78□□□□□ -1.64
NUP60YAR002W GDB1Q06625 1536 aa4.78□□□□□ -1.64
NUP60YAR002W YMR196WQ04336 1088 aa4.77□□□□□ -1.65
NUP60YAR002W ARO1P08566 1588 aaKnown RBP4.77□□□□□ -1.65
NUP60YAR002W SRB8P25648 1427 aa4.77□□□□□ -1.65
NUP60YAR002W SPO14P36126 1683 aa4.77□□□□□ -1.65
NUP60YAR002W NIS1P53939 407 aa4.76□□□□□ -1.65
NUP60YAR002W YRF1-1P0CX20 1796 aa4.76□□□□□ -1.65
NUP60YAR002W YRF1-5P0CX21 1796 aa4.76□□□□□ -1.65
NUP60YAR002W YRF1-8P0CX22 1796 aa4.76□□□□□ -1.65
NUP60YAR002W NUP157P40064 1391 aaKnown RBP4.76□□□□□ -1.65
NUP60YAR002W FPK1P53739 893 aa4.75□□□□□ -1.65
NUP60YAR002W SIT4P20604 311 aa4.75□□□□□ -1.65
NUP60YAR002W HST2P53686 357 aa4.75□□□□□ -1.65
NUP60YAR002W GLN1P32288 370 aaKnown RBP4.74□□□□□ -1.65
NUP60YAR002W SPT23P35210 1082 aa4.74□□□□□ -1.65
NUP60YAR002W BRL1P38770 471 aa4.74□□□□□ -1.65
NUP60YAR002W BNI4P53858 892 aa4.74□□□□□ -1.65
NUP60YAR002W NPL4P33755 580 aa4.73□□□□□ -1.65
NUP60YAR002W MMP1Q12372 583 aa4.73□□□□□ -1.65
NUP60YAR002W PDR1P12383 1068 aa4.72□□□□□ -1.65
NUP60YAR002W NUD1P32336 851 aa4.72□□□□□ -1.65
NUP60YAR002W TFB3Q03290 321 aa4.72□□□□□ -1.65
NUP60YAR002W TYW1Q08960 810 aaKnown RBP4.72□□□□□ -1.65
NUP60YAR002W YSP2Q06681 1438 aa4.72□□□□□ -1.65
NUP60YAR002W KTR1P27810 393 aaKnown RBP4.72□□□□□ -1.65
NUP60YAR002W RTF1P53064 558 aa4.72□□□□□ -1.65
NUP60YAR002W YNL115CP53925 644 aa4.71□□□□□ -1.66
NUP60YAR002W IQG1Q12280 1495 aa4.71□□□□□ -1.66
NUP60YAR002W MMS1Q06211 1407 aa4.7□□□□□ -1.66
NUP60YAR002W BUD3P25558 1636 aa4.7□□□□□ -1.66
NUP60YAR002W SCJ1P25303 377 aa4.7□□□□□ -1.66
NUP60YAR002W PTC2P39966 464 aaKnown RBP4.7□□□□□ -1.66
NUP60YAR002W ESS1P22696 170 aa4.69□□□□□ -1.66
NUP60YAR002W BUD21Q08492 214 aaPredicted RBP4.69□□□□□ -1.66
NUP60YAR002W GCN2P15442 1659 aa4.69□□□□□ -1.66
NUP60YAR002W SLY41P22215 453 aa4.68□□□□□ -1.66
NUP60YAR002W PKH3Q03306 898 aaPredicted RBP4.68□□□□□ -1.66
NUP60YAR002W YML082WQ04533 649 aaKnown RBP4.68□□□□□ -1.66
NUP60YAR002W KEX2P13134 814 aa4.68□□□□□ -1.66
NUP60YAR002W RAM1P22007 431 aa4.68□□□□□ -1.66
NUP60YAR002W STR2P47164 639 aa4.68□□□□□ -1.66
NUP60YAR002W ISM1P48526 1002 aa4.68□□□□□ -1.66
NUP60YAR002W LTE1P07866 1435 aa4.68□□□□□ -1.66
NUP60YAR002W GCD11P32481 527 aaKnown RBP4.67□□□□□ -1.66
NUP60YAR002W PKC1P24583 1151 aa4.66□□□□□ -1.66
NUP60YAR002W RAD59Q12223 238 aa4.66□□□□□ -1.66
NUP60YAR002W RLF2Q12495 606 aa4.66□□□□□ -1.66
NUP60YAR002W BNR1P40450 1375 aa4.66□□□□□ -1.66
NUP60YAR002W ARG8P18544 423 aa4.65□□□□□ -1.66
NUP60YAR002W YJU3P28321 313 aa4.65□□□□□ -1.66
NUP60YAR002W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.65□□□□□ -1.66not detected
NUP60YAR002W ERF2Q06551 359 aa4.65□□□□□ -1.66
NUP60YAR002W LAM6Q08001 693 aa4.65□□□□□ -1.66
NUP60YAR002W BUD20Q08004 166 aaPredicted RBP4.65□□□□□ -1.66
NUP60YAR002W CSE4P36012 229 aa4.64□□□□□ -1.67
NUP60YAR002W YBL036CP38197 257 aa4.64□□□□□ -1.67
NUP60YAR002W PUS6P53294 404 aa4.64□□□□□ -1.67
NUP60YAR002W TRM3Q07527 1436 aa4.64□□□□□ -1.67
NUP60YAR002W PRT1P06103 763 aaKnown RBP4.64□□□□□ -1.67
NUP60YAR002W POL5P39985 1022 aaKnown RBP4.64□□□□□ -1.67
NUP60YAR002W YPR015CQ12531 247 aa4.64□□□□□ -1.67
NUP60YAR002W PDR5P33302 1511 aaKnown RBP4.63□□□□□ -1.67
NUP60YAR002W YOR093CQ12275 1648 aa4.63□□□□□ -1.67
NUP60YAR002W RSC30P38781 883 aa4.63□□□□□ -1.67
NUP60YAR002W NOP7P53261 605 aaKnown RBP4.63□□□□□ -1.67
NUP60YAR002W DRS2P39524 1355 aa4.63□□□□□ -1.67
NUP60YAR002W SEC7P11075 2009 aaKnown RBP4.62□□□□□ -1.67
NUP60YAR002W DOP1Q03921 1698 aa4.62□□□□□ -1.67
NUP60YAR002W TY1A-DR4O74302 440 aa4.62□□□□□ -1.67
NUP60YAR002W TY1A-HP0C2I4 478 aaKnown RBP4.62□□□□□ -1.67
NUP60YAR002W TY1A-AP0CX57 440 aa4.62□□□□□ -1.67
NUP60YAR002W TY1A-PR1P0CX58 440 aa4.62□□□□□ -1.67
NUP60YAR002W TY1A-ORP0CX59 440 aa4.62□□□□□ -1.67
NUP60YAR002W TY1A-PR2P0CX60 440 aa4.62□□□□□ -1.67
NUP60YAR002W TY1A-DR5P0CX65 440 aa4.62□□□□□ -1.67
NUP60YAR002W TY1A-ER2P0CX66 440 aa4.62□□□□□ -1.67
NUP60YAR002W TY1A-GR3P0CX67 440 aa4.62□□□□□ -1.67
NUP60YAR002W TY1A-LR1P0CX68 440 aa4.62□□□□□ -1.67
NUP60YAR002W TY1A-MR2P0CX69 440 aa4.62□□□□□ -1.67
NUP60YAR002W TRM1P15565 570 aaKnown RBP4.62□□□□□ -1.67
NUP60YAR002W SEC2P17065 759 aa4.62□□□□□ -1.67
NUP60YAR002W PAT1P25644 796 aaKnown RBP4.62□□□□□ -1.67
NUP60YAR002W TY1A-JR2P47099 440 aa4.62□□□□□ -1.67
NUP60YAR002W TBF1Q02457 562 aa4.62□□□□□ -1.67
NUP60YAR002W TY1A-DR1Q03856 440 aa4.62□□□□□ -1.67
NUP60YAR002W TY1A-ML1Q04706 440 aaKnown RBP4.62□□□□□ -1.67
NUP60YAR002W TY1A-BRQ12217 440 aa4.62□□□□□ -1.67
NUP60YAR002W TY1A-NL2Q12470 440 aa4.62□□□□□ -1.67
NUP60YAR002W TY1A-GR2Q12485 440 aa4.62□□□□□ -1.67
NUP60YAR002W YJL007CP47080 104 aa4.61□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms