RNA–Protein interactions for RNA: ENST00000592657.1

LDLRAD4-216, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-216ENST00000592657 PDE4AP27815 886 aa10.92□□□□□ -0.66
LDLRAD4-216ENST00000592657 BIVM-ERCC5R4GMW8 1640 aa10.91□□□□□ -0.66
LDLRAD4-216ENST00000592657 PPP1R15BQ5SWA1 713 aa10.9□□□□□ -0.66
LDLRAD4-216ENST00000592657 BCL2L12Q9HB09 334 aa10.9□□□□□ -0.66
LDLRAD4-216ENST00000592657 NESP48681 1621 aa10.89□□□□□ -0.67
LDLRAD4-216ENST00000592657 ABCC8Q09428 1581 aa10.89□□□□□ -0.67
LDLRAD4-216ENST00000592657 MRPL50Q8N5N7 158 aaKnown RBP10.88□□□□□ -0.67
LDLRAD4-216ENST00000592657 SYNJ1O43426 1573 aa10.86□□□□□ -0.67
LDLRAD4-216ENST00000592657 WNT2BQ93097 391 aa10.86□□□□□ -0.67
LDLRAD4-216ENST00000592657 SLC4A5Q9BY07 1137 aa10.86□□□□□ -0.67
LDLRAD4-216ENST00000592657 MAP3K9P80192 1104 aa10.85□□□□□ -0.67
LDLRAD4-216ENST00000592657 CRISPLD2Q9H0B8 497 aa10.85□□□□□ -0.67
LDLRAD4-216ENST00000592657 CADPSQ9ULU8 1353 aa10.85□□□□□ -0.67
LDLRAD4-216ENST00000592657 EVI5O60447 810 aa10.84□□□□□ -0.67
LDLRAD4-216ENST00000592657 FOSBP53539 338 aa10.84□□□□□ -0.67
LDLRAD4-216ENST00000592657 NKX1-1Q15270 411 aaPredicted RBP10.84□□□□□ -0.67
LDLRAD4-216ENST00000592657 THOC2Q8NI27 1593 aaKnown RBP10.84□□□□□ -0.67
LDLRAD4-216ENST00000592657 TOP2BQ02880 1626 aa10.84□□□□□ -0.67
LDLRAD4-216ENST00000592657 ZDHHC16Q969W1 377 aa10.83□□□□□ -0.68
LDLRAD4-216ENST00000592657 LARP6Q9BRS8 491 aaKnown RBP10.83□□□□□ -0.68
LDLRAD4-216ENST00000592657 NBPF3Q9H094 633 aa10.83□□□□□ -0.68
LDLRAD4-216ENST00000592657 THSD4Q6ZMP0 1018 aa10.82□□□□□ -0.68
LDLRAD4-216ENST00000592657 WDR97A6NE52 1622 aa10.81□□□□□ -0.68
LDLRAD4-216ENST00000592657 FANCD2Q9BXW9 1451 aa10.81□□□□□ -0.68
LDLRAD4-216ENST00000592657 BHMG1C9JSJ3 638 aaPredicted RBP10.8□□□□□ -0.68
LDLRAD4-216ENST00000592657 JPH4Q96JJ6 628 aa10.8□□□□□ -0.68
LDLRAD4-216ENST00000592657 ZBED2Q9BTP6 218 aa10.8□□□□□ -0.68
LDLRAD4-216ENST00000592657 DNAJC5Q9H3Z4 198 aa10.8□□□□□ -0.68
LDLRAD4-216ENST00000592657 ANO8Q9HCE9 1232 aaPredicted RBP10.8□□□□□ -0.68
LDLRAD4-216ENST00000592657 DNMBPQ6XZF7 1577 aa10.8□□□□□ -0.68
LDLRAD4-216ENST00000592657 CEP164Q9UPV0 1460 aa10.8□□□□□ -0.68
LDLRAD4-216ENST00000592657 CUX1P39880 1505 aa10.79□□□□□ -0.68
LDLRAD4-216ENST00000592657 DDX27Q96GQ7 796 aaKnown RBP10.79□□□□□ -0.68
LDLRAD4-216ENST00000592657 RGS20O76081 388 aa10.78□□□□□ -0.68
LDLRAD4-216ENST00000592657 ADAM33Q9BZ11 813 aa10.77□□□□□ -0.69
LDLRAD4-216ENST00000592657 NCKAP5LQ9HCH0 1330 aa10.77□□□□□ -0.69
LDLRAD4-216ENST00000592657 IRX2Q9BZI1 471 aaPredicted RBP10.76□□□□□ -0.69
LDLRAD4-216ENST00000592657 WRNQ14191 1432 aaPredicted RBP eCLIP10.75□□□□□ -0.69
LDLRAD4-216ENST00000592657 WDR62O43379 1518 aa10.74□□□□□ -0.69
LDLRAD4-216ENST00000592657 IFFO2Q5TF58 517 aa10.74□□□□□ -0.69
LDLRAD4-216ENST00000592657 PDS5BQ9NTI5 1447 aa10.74□□□□□ -0.69
LDLRAD4-216ENST00000592657 ANKK1Q8NFD2 765 aa10.73□□□□□ -0.69
LDLRAD4-216ENST00000592657 URB2Q14146 1524 aaKnown RBP10.73□□□□□ -0.69
LDLRAD4-216ENST00000592657 TOPBP1Q92547 1522 aa10.72□□□□□ -0.69
LDLRAD4-216ENST00000592657 MRC2Q9UBG0 1479 aa10.71□□□□□ -0.69
LDLRAD4-216ENST00000592657 GTPBP6O43824 516 aaPredicted RBP10.7□□□□□ -0.7
LDLRAD4-216ENST00000592657 RABGEF1Q9UJ41 708 aa10.7□□□□□ -0.7
LDLRAD4-216ENST00000592657 A0A0G2JS52 829 aa10.69□□□□□ -0.7
LDLRAD4-216ENST00000592657 PPP1R3GB7ZBB8 358 aa10.69□□□□□ -0.7
LDLRAD4-216ENST00000592657 FBXW7Q969H0 707 aa10.68□□□□□ -0.7
LDLRAD4-216ENST00000592657 PBRM1Q86U86 1689 aa10.68□□□□□ -0.7
LDLRAD4-216ENST00000592657 TARBP1Q13395 1621 aaKnown RBP10.67□□□□□ -0.7
LDLRAD4-216ENST00000592657 PCDHGA10Q9Y5H3 936 aa10.67□□□□□ -0.7
LDLRAD4-216ENST00000592657 ERCC6Q03468 1493 aa10.67□□□□□ -0.7
LDLRAD4-216ENST00000592657 FGD5Q6ZNL6 1462 aa10.67□□□□□ -0.7
LDLRAD4-216ENST00000592657 PROX2Q3B8N5 592 aa10.66□□□□□ -0.7
LDLRAD4-216ENST00000592657 TYW1BQ6NUM6 668 aa10.66□□□□□ -0.7
LDLRAD4-216ENST00000592657 ABCA5Q8WWZ7 1642 aa10.66□□□□□ -0.7
LDLRAD4-216ENST00000592657 POLA1P09884 1462 aaPredicted RBP10.64□□□□□ -0.71
LDLRAD4-216ENST00000592657 PLCB2Q00722 1185 aa10.64□□□□□ -0.71
LDLRAD4-216ENST00000592657 PHF14O94880 888 aa10.63□□□□□ -0.71
LDLRAD4-216ENST00000592657 MFSD10Q14728 455 aa10.63□□□□□ -0.71
LDLRAD4-216ENST00000592657 LAPTM4BQ86VI4 370 aa10.63□□□□□ -0.71
LDLRAD4-216ENST00000592657 EMILIN3Q9NT22 766 aa10.63□□□□□ -0.71
LDLRAD4-216ENST00000592657 KIAA1468Q9P260 1216 aa10.63□□□□□ -0.71
LDLRAD4-216ENST00000592657 COL9A1P20849 921 aa10.62□□□□□ -0.71
LDLRAD4-216ENST00000592657 BCAMP50895 628 aa10.62□□□□□ -0.71
LDLRAD4-216ENST00000592657 SOWAHBA6NEL2 793 aa10.6□□□□□ -0.71
LDLRAD4-216ENST00000592657 NYAP1Q6ZVC0 841 aa10.6□□□□□ -0.71
LDLRAD4-216ENST00000592657 ZFRQ96KR1 1074 aaKnown RBP10.6□□□□□ -0.71
LDLRAD4-216ENST00000592657 EIF4G3O43432 1585 aaKnown RBP10.6□□□□□ -0.71
LDLRAD4-216ENST00000592657 EPAS1Q99814 870 aa10.59□□□□□ -0.71
LDLRAD4-216ENST00000592657 ABCA10Q8WWZ4 1543 aa10.58□□□□□ -0.72
LDLRAD4-216ENST00000592657 KCNC4Q03721 635 aa10.58□□□□□ -0.72
LDLRAD4-216ENST00000592657 C6orf132Q5T0Z8 1188 aa10.58□□□□□ -0.72
LDLRAD4-216ENST00000592657 CUX2O14529 1486 aa10.57□□□□□ -0.72
LDLRAD4-216ENST00000592657 RBM33Q96EV2 1170 aaKnown RBP10.57□□□□□ -0.72
LDLRAD4-216ENST00000592657 CUL7Q14999 1698 aa10.57□□□□□ -0.72
LDLRAD4-216ENST00000592657 ONECUT3O60422 494 aaPredicted RBP10.56□□□□□ -0.72
LDLRAD4-216ENST00000592657 ITGBL1O95965 494 aaPredicted RBP10.56□□□□□ -0.72
LDLRAD4-216ENST00000592657 WBP1LQ9NX94 342 aa10.56□□□□□ -0.72
LDLRAD4-216ENST00000592657 SEPT9Q9UHD8 586 aaPredicted RBP10.56□□□□□ -0.72
LDLRAD4-216ENST00000592657 KIF21BO75037 1637 aa10.55□□□□□ -0.72
LDLRAD4-216ENST00000592657 Q6ZNB5 142 aa10.55□□□□□ -0.72
LDLRAD4-216ENST00000592657 RAD54L2Q9Y4B4 1467 aa10.54□□□□□ -0.72
LDLRAD4-216ENST00000592657 LRCH3Q96II8 777 aa10.53□□□□□ -0.72
LDLRAD4-216ENST00000592657 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.53□□□□□ -0.72
LDLRAD4-216ENST00000592657 EEA1Q15075 1411 aa10.52□□□□□ -0.73
LDLRAD4-216ENST00000592657 DPYSL4O14531 572 aa10.52□□□□□ -0.73
LDLRAD4-216ENST00000592657 IFT140Q96RY7 1462 aa10.52□□□□□ -0.73
LDLRAD4-216ENST00000592657 CTTNBP2Q8WZ74 1663 aa10.52□□□□□ -0.73
LDLRAD4-216ENST00000592657 RUSC2Q8N2Y8 1516 aa10.52□□□□□ -0.73
LDLRAD4-216ENST00000592657 ADAMTS12P58397 1594 aa10.52□□□□□ -0.73
LDLRAD4-216ENST00000592657 SOGA1O94964 1423 aa10.51□□□□□ -0.73
LDLRAD4-216ENST00000592657 TRIM6-TRIM34B2RNG4 842 aa10.51□□□□□ -0.73
LDLRAD4-216ENST00000592657 FAM98CQ17RN3 349 aaKnown RBP10.51□□□□□ -0.73
LDLRAD4-216ENST00000592657 CADPS2Q86UW7 1296 aa10.51□□□□□ -0.73
LDLRAD4-216ENST00000592657 PACS2Q86VP3 889 aa10.51□□□□□ -0.73
LDLRAD4-216ENST00000592657 DDX12PQ92771 950 aa10.51□□□□□ -0.73
LDLRAD4-216ENST00000592657 TSR3Q9UJK0 312 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms