RNA–Protein interactions for RNA: ENST00000592657.1

LDLRAD4-216, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-216ENST00000592657 AEBP2Q6ZN18 517 aaPredicted RBP26.47■■□□□ 1.83
LDLRAD4-216ENST00000592657 CHIC1Q5VXU3 224 aa25.02■■□□□ 1.6
LDLRAD4-216ENST00000592657 SENP3Q9H4L4 574 aaPredicted RBP22.75■■□□□ 1.23
LDLRAD4-216ENST00000592657 PHF23Q9BUL5 403 aaPredicted RBP22.43■■□□□ 1.18
LDLRAD4-216ENST00000592657 FOXD1Q16676 465 aa21.16■□□□□ 0.98
LDLRAD4-216ENST00000592657 PLPPR3Q6T4P5 718 aa20■□□□□ 0.79
LDLRAD4-216ENST00000592657 MSH5O43196 834 aa19.96■□□□□ 0.79
LDLRAD4-216ENST00000592657 PIAS4Q8N2W9 510 aaPredicted RBP19.82■□□□□ 0.76
LDLRAD4-216ENST00000592657 POTEDQ86YR6 584 aa19.74■□□□□ 0.75
LDLRAD4-216ENST00000592657 ADRA2BP18089 450 aa19.62■□□□□ 0.73
LDLRAD4-216ENST00000592657 PPP6R1Q9UPN7 881 aa19.62■□□□□ 0.73
LDLRAD4-216ENST00000592657 SCAF1Q9H7N4 1312 aaKnown RBP18.1■□□□□ 0.49
LDLRAD4-216ENST00000592657 MAPK8IP2Q13387 824 aaPredicted RBP18.06■□□□□ 0.48
LDLRAD4-216ENST00000592657 DMRT2Q9Y5R5 561 aa17.95■□□□□ 0.46
LDLRAD4-216ENST00000592657 PPP4R3CPQ6ZMV5 832 aa17.49■□□□□ 0.39
LDLRAD4-216ENST00000592657 DCAF8L1A6NGE4 600 aa17.46■□□□□ 0.39
LDLRAD4-216ENST00000592657 CACNB1Q02641 598 aaPredicted RBP17.33■□□□□ 0.36
LDLRAD4-216ENST00000592657 CNKSR2Q8WXI2 1034 aa17.21■□□□□ 0.35
LDLRAD4-216ENST00000592657 HOXD11P31277 338 aaPredicted RBP17.19■□□□□ 0.34
LDLRAD4-216ENST00000592657 RNF216Q9NWF9 866 aaPredicted RBP17.07■□□□□ 0.32
LDLRAD4-216ENST00000592657 RNF39Q9H2S5 420 aa16.93■□□□□ 0.3
LDLRAD4-216ENST00000592657 NCBP3Q53F19 620 aaKnown RBP16.87■□□□□ 0.29
LDLRAD4-216ENST00000592657 C1QBPQ07021 282 aaKnown RBP16.75■□□□□ 0.27
LDLRAD4-216ENST00000592657 DNAJC5BQ9UF47 199 aa16.62■□□□□ 0.25
LDLRAD4-216ENST00000592657 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.57■□□□□ 0.24
LDLRAD4-216ENST00000592657 NPM3O75607 178 aaKnown RBP16.47■□□□□ 0.23
LDLRAD4-216ENST00000592657 U3KPZ7 1027 aaPredicted RBP16.03■□□□□ 0.16
LDLRAD4-216ENST00000592657 CAPN15O75808 1086 aa16.01■□□□□ 0.15
LDLRAD4-216ENST00000592657 KCNA4P22459 653 aa15.99■□□□□ 0.15
LDLRAD4-216ENST00000592657 SPINK5Q9NQ38 1064 aaPredicted RBP15.89■□□□□ 0.13
LDLRAD4-216ENST00000592657 DSG3P32926 999 aa15.82■□□□□ 0.12
LDLRAD4-216ENST00000592657 APLP2Q06481 763 aa15.77■□□□□ 0.12
LDLRAD4-216ENST00000592657 SLC4A2P04920 1241 aa15.72■□□□□ 0.11
LDLRAD4-216ENST00000592657 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
LDLRAD4-216ENST00000592657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.68■□□□□ 0.1
LDLRAD4-216ENST00000592657 HNRNPUL2Q1KMD3 747 aaKnown RBP15.68■□□□□ 0.1
LDLRAD4-216ENST00000592657 ZNF219Q9P2Y4 722 aaPredicted RBP15.61■□□□□ 0.09
LDLRAD4-216ENST00000592657 ABCB7O75027 752 aa15.56■□□□□ 0.08
LDLRAD4-216ENST00000592657 SAMD1Q6SPF0 538 aaPredicted RBP15.54■□□□□ 0.08
LDLRAD4-216ENST00000592657 POTEHQ6S545 545 aa15.48■□□□□ 0.07
LDLRAD4-216ENST00000592657 MYCNP04198 464 aaPredicted RBP15.29■□□□□ 0.04
LDLRAD4-216ENST00000592657 POLA2Q14181 598 aa15.2■□□□□ 0.02
LDLRAD4-216ENST00000592657 RBM42Q9BTD8 480 aaKnown RBP15.2■□□□□ 0.02
LDLRAD4-216ENST00000592657 SLC4A1APQ9BWU0 796 aaKnown RBP15.14■□□□□ 0.01
LDLRAD4-216ENST00000592657 FOXD4L1Q9NU39 408 aa15.01□□□□□ -0.01
LDLRAD4-216ENST00000592657 NISCHQ9Y2I1 1504 aa14.91□□□□□ -0.02
LDLRAD4-216ENST00000592657 CHRDL2Q6WN34 429 aa14.89□□□□□ -0.03
LDLRAD4-216ENST00000592657 ZBTB12Q9Y330 459 aaPredicted RBP14.89□□□□□ -0.03
LDLRAD4-216ENST00000592657 ATF5Q9Y2D1 282 aaPredicted RBP14.86□□□□□ -0.03
LDLRAD4-216ENST00000592657 AKT1S1Q96B36 256 aa14.77□□□□□ -0.05
LDLRAD4-216ENST00000592657 OSCARQ8IYS5 282 aa14.65□□□□□ -0.06
LDLRAD4-216ENST00000592657 REM2Q8IYK8 340 aaPredicted RBP14.62□□□□□ -0.07
LDLRAD4-216ENST00000592657 ZBTB22O15209 634 aa14.59□□□□□ -0.07
LDLRAD4-216ENST00000592657 ATXN8OSP0DMR3 200 aa14.57□□□□□ -0.08
LDLRAD4-216ENST00000592657 FBLN2P98095 1184 aa14.49□□□□□ -0.09
LDLRAD4-216ENST00000592657 PIP4P2Q8N4L2 257 aa14.46□□□□□ -0.09
LDLRAD4-216ENST00000592657 PITPNM1O00562 1244 aa14.43□□□□□ -0.1
LDLRAD4-216ENST00000592657 SP7Q8TDD2 431 aaPredicted RBP14.42□□□□□ -0.1
LDLRAD4-216ENST00000592657 HAX1O00165 279 aa14.41□□□□□ -0.1
LDLRAD4-216ENST00000592657 SPDYE2BA6NHP3 402 aa14.37□□□□□ -0.11
LDLRAD4-216ENST00000592657 SPDYE6P0CI01 402 aa14.37□□□□□ -0.11
LDLRAD4-216ENST00000592657 SPDYE2Q495Y8 402 aa14.37□□□□□ -0.11
LDLRAD4-216ENST00000592657 FXR2P51116 673 aaKnown RBP eCLIP14.32□□□□□ -0.12
LDLRAD4-216ENST00000592657 CLEC11AQ9Y240 323 aa14.27□□□□□ -0.13
LDLRAD4-216ENST00000592657 ZNF692Q9BU19 519 aaPredicted RBP14.25□□□□□ -0.13
LDLRAD4-216ENST00000592657 SPDYE1Q8NFV5 336 aaPredicted RBP14.21□□□□□ -0.13
LDLRAD4-216ENST00000592657 PRKAR2AP13861 404 aaKnown RBP14.14□□□□□ -0.15
LDLRAD4-216ENST00000592657 MKRN4PQ13434 485 aaPredicted RBP14.14□□□□□ -0.15
LDLRAD4-216ENST00000592657 SSUH2Q9Y2M2 353 aa14.06□□□□□ -0.16
LDLRAD4-216ENST00000592657 EVX2Q03828 476 aa14.02□□□□□ -0.17
LDLRAD4-216ENST00000592657 PRR29P0C7W0 189 aa13.99□□□□□ -0.17
LDLRAD4-216ENST00000592657 PABPN1Q86U42 306 aaKnown RBP eCLIP13.98□□□□□ -0.17
LDLRAD4-216ENST00000592657 CHADLQ6NUI6 762 aa13.92□□□□□ -0.18
LDLRAD4-216ENST00000592657 C19orf67A6NJJ6 358 aa13.87□□□□□ -0.19
LDLRAD4-216ENST00000592657 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
LDLRAD4-216ENST00000592657 GABBR2O75899 941 aa13.77□□□□□ -0.21
LDLRAD4-216ENST00000592657 FARP1Q9Y4F1 1045 aaPredicted RBP13.68□□□□□ -0.22
LDLRAD4-216ENST00000592657 CD44P16070 742 aaKnown RBP13.67□□□□□ -0.22
LDLRAD4-216ENST00000592657 EHMT2Q96KQ7 1210 aa13.67□□□□□ -0.22
LDLRAD4-216ENST00000592657 STAG3Q9UJ98 1225 aa13.62□□□□□ -0.23
LDLRAD4-216ENST00000592657 LHX8Q68G74 356 aa13.57□□□□□ -0.24
LDLRAD4-216ENST00000592657 CLCN6P51797 869 aa13.55□□□□□ -0.24
LDLRAD4-216ENST00000592657 SPDYE4A6NLX3 237 aa13.53□□□□□ -0.24
LDLRAD4-216ENST00000592657 ZRANB1Q9UGI0 708 aa13.49□□□□□ -0.25
LDLRAD4-216ENST00000592657 DCBLD2Q96PD2 775 aa13.48□□□□□ -0.25
LDLRAD4-216ENST00000592657 CREBZFQ9NS37 354 aa13.44□□□□□ -0.26
LDLRAD4-216ENST00000592657 PAK3O75914 559 aaPredicted RBP13.42□□□□□ -0.26
LDLRAD4-216ENST00000592657 POTEIP0CG38 1075 aa13.38□□□□□ -0.27
LDLRAD4-216ENST00000592657 ZNF579Q8NAF0 562 aaKnown RBP13.36□□□□□ -0.27
LDLRAD4-216ENST00000592657 NPM1P06748 294 aaKnown RBP eCLIP13.35□□□□□ -0.27
LDLRAD4-216ENST00000592657 CCDC180Q9P1Z9 1646 aa13.32□□□□□ -0.28
LDLRAD4-216ENST00000592657 GALR2O43603 387 aaPredicted RBP13.24□□□□□ -0.29
LDLRAD4-216ENST00000592657 PHF12Q96QT6 1004 aa13.2□□□□□ -0.3
LDLRAD4-216ENST00000592657 MNX1P50219 401 aaPredicted RBP13.12□□□□□ -0.31
LDLRAD4-216ENST00000592657 PLEKHG5O94827 1062 aa13.11□□□□□ -0.31
LDLRAD4-216ENST00000592657 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
LDLRAD4-216ENST00000592657 MIER1Q8N108 512 aa13.04□□□□□ -0.32
LDLRAD4-216ENST00000592657 MS4A3Q96HJ5 214 aa13□□□□□ -0.33
LDLRAD4-216ENST00000592657 PELP1Q8IZL8 1130 aaKnown RBP12.97□□□□□ -0.33
LDLRAD4-216ENST00000592657 PROM2Q8N271 834 aa12.97□□□□□ -0.33
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