RNA–Protein interactions for RNA: ENST00000581790.5

NF1-221, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 1,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-221ENST00000581790 ABCC8Q09428 1581 aa10.6□□□□□ -0.71
NF1-221ENST00000581790 FOSBP53539 338 aa10.58□□□□□ -0.72
NF1-221ENST00000581790 PKD2Q13563 968 aa10.56□□□□□ -0.72
NF1-221ENST00000581790 NBPF3Q9H094 633 aa10.56□□□□□ -0.72
NF1-221ENST00000581790 CC2D2AQ9P2K1 1620 aa10.55□□□□□ -0.72
NF1-221ENST00000581790 Q6ZNB5 142 aa10.55□□□□□ -0.72
NF1-221ENST00000581790 ITGBL1O95965 494 aaPredicted RBP10.54□□□□□ -0.72
NF1-221ENST00000581790 JPH4Q96JJ6 628 aa10.53□□□□□ -0.72
NF1-221ENST00000581790 ADAM33Q9BZ11 813 aa10.5□□□□□ -0.73
NF1-221ENST00000581790 WRNQ14191 1432 aaPredicted RBP eCLIP10.49□□□□□ -0.73
NF1-221ENST00000581790 LOC105371045A0A1W2PR82 267 aa10.48□□□□□ -0.73
NF1-221ENST00000581790 PPP1R15BQ5SWA1 713 aa10.48□□□□□ -0.73
NF1-221ENST00000581790 ZDHHC16Q969W1 377 aa10.48□□□□□ -0.73
NF1-221ENST00000581790 CRISPLD2Q9H0B8 497 aa10.48□□□□□ -0.73
NF1-221ENST00000581790 SYNJ1O43426 1573 aa10.48□□□□□ -0.73
NF1-221ENST00000581790 BIVM-ERCC5R4GMW8 1640 aa10.47□□□□□ -0.73
NF1-221ENST00000581790 ANKK1Q8NFD2 765 aa10.47□□□□□ -0.73
NF1-221ENST00000581790 ANO8Q9HCE9 1232 aaPredicted RBP10.47□□□□□ -0.73
NF1-221ENST00000581790 HS6ST3Q8IZP7 471 aa10.46□□□□□ -0.73
NF1-221ENST00000581790 FAM9AQ8IZU1 332 aaPredicted RBP10.46□□□□□ -0.73
NF1-221ENST00000581790 EEA1Q15075 1411 aa10.45□□□□□ -0.74
NF1-221ENST00000581790 TOP2BQ02880 1626 aa10.44□□□□□ -0.74
NF1-221ENST00000581790 EVI5O60447 810 aa10.44□□□□□ -0.74
NF1-221ENST00000581790 BCAMP50895 628 aa10.44□□□□□ -0.74
NF1-221ENST00000581790 PPP1R3GB7ZBB8 358 aa10.43□□□□□ -0.74
NF1-221ENST00000581790 RABGEF1Q9UJ41 708 aa10.43□□□□□ -0.74
NF1-221ENST00000581790 CFTRP13569 1480 aa10.42□□□□□ -0.74
NF1-221ENST00000581790 PROX2Q3B8N5 592 aa10.41□□□□□ -0.74
NF1-221ENST00000581790 LCE2BO14633 110 aa10.4□□□□□ -0.74
NF1-221ENST00000581790 NYAP1Q6ZVC0 841 aa10.4□□□□□ -0.74
NF1-221ENST00000581790 SOWAHBA6NEL2 793 aa10.39□□□□□ -0.75
NF1-221ENST00000581790 LAPTM4AQ15012 233 aa10.38□□□□□ -0.75
NF1-221ENST00000581790 NCKAP5LQ9HCH0 1330 aa10.37□□□□□ -0.75
NF1-221ENST00000581790 COL9A1P20849 921 aa10.37□□□□□ -0.75
NF1-221ENST00000581790 KCNC4Q03721 635 aa10.37□□□□□ -0.75
NF1-221ENST00000581790 LAPTM4BQ86VI4 370 aa10.37□□□□□ -0.75
NF1-221ENST00000581790 SOGA1O94964 1423 aa10.36□□□□□ -0.75
NF1-221ENST00000581790 WBP1LQ9NX94 342 aa10.35□□□□□ -0.75
NF1-221ENST00000581790 KIF21BO75037 1637 aa10.35□□□□□ -0.75
NF1-221ENST00000581790 ZFRQ96KR1 1074 aaKnown RBP10.34□□□□□ -0.75
NF1-221ENST00000581790 PCDHGA10Q9Y5H3 936 aa10.34□□□□□ -0.75
NF1-221ENST00000581790 CADPSQ9ULU8 1353 aa10.34□□□□□ -0.75
NF1-221ENST00000581790 NKX1-1Q15270 411 aaPredicted RBP10.33□□□□□ -0.76
NF1-221ENST00000581790 CUX1P39880 1505 aa10.33□□□□□ -0.76
NF1-221ENST00000581790 LAMC3Q9Y6N6 1575 aa10.32□□□□□ -0.76
NF1-221ENST00000581790 RUSC2Q8N2Y8 1516 aa10.32□□□□□ -0.76
NF1-221ENST00000581790 PDE4AP27815 886 aa10.31□□□□□ -0.76
NF1-221ENST00000581790 TRAF7Q6Q0C0 670 aa10.31□□□□□ -0.76
NF1-221ENST00000581790 GOLGA3Q08378 1498 aa10.3□□□□□ -0.76
NF1-221ENST00000581790 GFRA3O60609 400 aa10.3□□□□□ -0.76
NF1-221ENST00000581790 MAP3K9P80192 1104 aa10.3□□□□□ -0.76
NF1-221ENST00000581790 RYDENQ9NUL5 291 aaKnown RBP10.3□□□□□ -0.76
NF1-221ENST00000581790 KIAA1468Q9P260 1216 aa10.3□□□□□ -0.76
NF1-221ENST00000581790 CHGAP10645 457 aaKnown RBP10.29□□□□□ -0.76
NF1-221ENST00000581790 FBXW7Q969H0 707 aa10.29□□□□□ -0.76
NF1-221ENST00000581790 DNAJC5Q9H3Z4 198 aa10.29□□□□□ -0.76
NF1-221ENST00000581790 CEP164Q9UPV0 1460 aa10.29□□□□□ -0.76
NF1-221ENST00000581790 TYW1BQ6NUM6 668 aa10.28□□□□□ -0.76
NF1-221ENST00000581790 SEPT9Q9UHD8 586 aaPredicted RBP10.28□□□□□ -0.76
NF1-221ENST00000581790 DDX27Q96GQ7 796 aaKnown RBP10.27□□□□□ -0.77
NF1-221ENST00000581790 TNIKQ9UKE5 1360 aa10.26□□□□□ -0.77
NF1-221ENST00000581790 FANCD2Q9BXW9 1451 aa10.25□□□□□ -0.77
NF1-221ENST00000581790 ONECUT3O60422 494 aaPredicted RBP10.25□□□□□ -0.77
NF1-221ENST00000581790 PHF14O94880 888 aa10.25□□□□□ -0.77
NF1-221ENST00000581790 EMILIN3Q9NT22 766 aa10.25□□□□□ -0.77
NF1-221ENST00000581790 TSR3Q9UJK0 312 aaKnown RBP10.25□□□□□ -0.77
NF1-221ENST00000581790 HPS5Q9UPZ3 1129 aa10.25□□□□□ -0.77
NF1-221ENST00000581790 DNMBPQ6XZF7 1577 aa10.25□□□□□ -0.77
NF1-221ENST00000581790 LARP6Q9BRS8 491 aaKnown RBP10.24□□□□□ -0.77
NF1-221ENST00000581790 KIF21AQ7Z4S6 1674 aa10.24□□□□□ -0.77
NF1-221ENST00000581790 ERICH3Q5RHP9 1530 aa10.23□□□□□ -0.77
NF1-221ENST00000581790 NRG2O14511 850 aaPredicted RBP10.23□□□□□ -0.77
NF1-221ENST00000581790 MFSD10Q14728 455 aa10.23□□□□□ -0.77
NF1-221ENST00000581790 FAM98CQ17RN3 349 aaKnown RBP10.23□□□□□ -0.77
NF1-221ENST00000581790 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.23□□□□□ -0.77
NF1-221ENST00000581790 LRCH3Q96II8 777 aa10.22□□□□□ -0.77
NF1-221ENST00000581790 CEP162Q5TB80 1403 aa10.22□□□□□ -0.77
NF1-221ENST00000581790 KIF27Q86VH2 1401 aa10.22□□□□□ -0.77
NF1-221ENST00000581790 TRIM6-TRIM34B2RNG4 842 aa10.21□□□□□ -0.77
NF1-221ENST00000581790 UBTFP17480 764 aaKnown RBP10.21□□□□□ -0.77
NF1-221ENST00000581790 NESP48681 1621 aa10.21□□□□□ -0.78
NF1-221ENST00000581790 FGD5Q6ZNL6 1462 aa10.2□□□□□ -0.78
NF1-221ENST00000581790 PRKD2Q9BZL6 878 aa10.2□□□□□ -0.78
NF1-221ENST00000581790 PCGF6Q9BYE7 350 aa10.19□□□□□ -0.78
NF1-221ENST00000581790 TRIM26Q12899 539 aaPredicted RBP10.18□□□□□ -0.78
NF1-221ENST00000581790 C6orf132Q5T0Z8 1188 aa10.18□□□□□ -0.78
NF1-221ENST00000581790 WDR97A6NE52 1622 aa10.18□□□□□ -0.78
NF1-221ENST00000581790 PDS5BQ9NTI5 1447 aa10.17□□□□□ -0.78
NF1-221ENST00000581790 TOPBP1Q92547 1522 aa10.17□□□□□ -0.78
NF1-221ENST00000581790 RAPGEF2Q9Y4G8 1499 aa10.17□□□□□ -0.78
NF1-221ENST00000581790 PRXQ9BXM0 1461 aa10.16□□□□□ -0.78
NF1-221ENST00000581790 TJAP1Q5JTD0 557 aa10.15□□□□□ -0.78
NF1-221ENST00000581790 EPAS1Q99814 870 aa10.15□□□□□ -0.78
NF1-221ENST00000581790 CUX2O14529 1486 aa10.15□□□□□ -0.78
NF1-221ENST00000581790 CUL7Q14999 1698 aa10.13□□□□□ -0.79
NF1-221ENST00000581790 ZNF787Q6DD87 383 aa10.13□□□□□ -0.79
NF1-221ENST00000581790 V9GY48 417 aaPredicted RBP10.13□□□□□ -0.79
NF1-221ENST00000581790 ABCA10Q8WWZ4 1543 aa10.12□□□□□ -0.79
NF1-221ENST00000581790 POLA1P09884 1462 aaPredicted RBP10.11□□□□□ -0.79
NF1-221ENST00000581790 CLIP1P30622 1438 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms