RNA–Protein interactions for RNA: ENST00000570231.1

THUMPD1-205, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 1,040 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-205ENST00000570231 PRXQ9BXM0 1461 aa11.24□□□□□ -0.61
THUMPD1-205ENST00000570231 RAPGEF2Q9Y4G8 1499 aa11.24□□□□□ -0.61
THUMPD1-205ENST00000570231 PBRM1Q86U86 1689 aa11.24□□□□□ -0.61
THUMPD1-205ENST00000570231 ZNF316A6NFI3 1004 aaPredicted RBP11.23□□□□□ -0.61
THUMPD1-205ENST00000570231 GOLGA3Q08378 1498 aa11.23□□□□□ -0.61
THUMPD1-205ENST00000570231 UBTFP17480 764 aaKnown RBP11.22□□□□□ -0.61
THUMPD1-205ENST00000570231 ADAMTS12P58397 1594 aa11.21□□□□□ -0.61
THUMPD1-205ENST00000570231 FHAD1B1AJZ9 1412 aa11.21□□□□□ -0.61
THUMPD1-205ENST00000570231 KIF21BO75037 1637 aa11.2□□□□□ -0.62
THUMPD1-205ENST00000570231 KHSRPQ92945 711 aaKnown RBP eCLIP11.2□□□□□ -0.62
THUMPD1-205ENST00000570231 PCDHGA4Q9Y5G9 962 aa11.2□□□□□ -0.62
THUMPD1-205ENST00000570231 CUL7Q14999 1698 aa11.2□□□□□ -0.62
THUMPD1-205ENST00000570231 MAGI1Q96QZ7 1491 aaPredicted RBP11.19□□□□□ -0.62
THUMPD1-205ENST00000570231 NUDT7P0C024 238 aa11.19□□□□□ -0.62
THUMPD1-205ENST00000570231 NKX1-1Q15270 411 aaPredicted RBP11.19□□□□□ -0.62
THUMPD1-205ENST00000570231 CHMP7Q8WUX9 453 aaPredicted RBP11.19□□□□□ -0.62
THUMPD1-205ENST00000570231 GPHNQ9NQX3 736 aaPredicted RBP11.19□□□□□ -0.62
THUMPD1-205ENST00000570231 RANGAP1P46060 587 aaPredicted RBP11.18□□□□□ -0.62
THUMPD1-205ENST00000570231 FOXK1P85037 733 aa11.18□□□□□ -0.62
THUMPD1-205ENST00000570231 PLPP6Q8IY26 295 aa11.17□□□□□ -0.62
THUMPD1-205ENST00000570231 SYNJ2O15056 1496 aa11.17□□□□□ -0.62
THUMPD1-205ENST00000570231 TBC1D12O60347 775 aa11.16□□□□□ -0.62
THUMPD1-205ENST00000570231 GRIN2AQ12879 1464 aa11.14□□□□□ -0.63
THUMPD1-205ENST00000570231 PSDA5PKW4 1024 aaPredicted RBP11.14□□□□□ -0.63
THUMPD1-205ENST00000570231 TNIKQ9UKE5 1360 aa11.13□□□□□ -0.63
THUMPD1-205ENST00000570231 PTCD2Q8WV60 388 aaKnown RBP11.12□□□□□ -0.63
THUMPD1-205ENST00000570231 LHX6Q9UPM6 363 aa11.12□□□□□ -0.63
THUMPD1-205ENST00000570231 PBX2P40425 430 aa11.11□□□□□ -0.63
THUMPD1-205ENST00000570231 PTGER2P43116 358 aa11.11□□□□□ -0.63
THUMPD1-205ENST00000570231 DSG2Q14126 1118 aa11.11□□□□□ -0.63
THUMPD1-205ENST00000570231 PDE4AP27815 886 aa11.09□□□□□ -0.63
THUMPD1-205ENST00000570231 CEP162Q5TB80 1403 aa11.09□□□□□ -0.63
THUMPD1-205ENST00000570231 GTPBP6O43824 516 aaPredicted RBP11.08□□□□□ -0.64
THUMPD1-205ENST00000570231 CEP170Q5SW79 1584 aa11.07□□□□□ -0.64
THUMPD1-205ENST00000570231 ANKRD13DQ6ZTN6 518 aa11.07□□□□□ -0.64
THUMPD1-205ENST00000570231 CHD1O14646 1710 aa11.06□□□□□ -0.64
THUMPD1-205ENST00000570231 RNF166Q96A37 237 aaPredicted RBP11.06□□□□□ -0.64
THUMPD1-205ENST00000570231 CRISPLD2Q9H0B8 497 aa11.06□□□□□ -0.64
THUMPD1-205ENST00000570231 MYT1LQ9UL68 1186 aa11.06□□□□□ -0.64
THUMPD1-205ENST00000570231 NUP160Q12769 1436 aa11.06□□□□□ -0.64
THUMPD1-205ENST00000570231 CLIP1P30622 1438 aa11.05□□□□□ -0.64
THUMPD1-205ENST00000570231 LSM11P83369 360 aaKnown RBP eCLIP11.05□□□□□ -0.64
THUMPD1-205ENST00000570231 PPP1R15BQ5SWA1 713 aa11.05□□□□□ -0.64
THUMPD1-205ENST00000570231 KIAA0586Q9BVV6 1533 aa11.04□□□□□ -0.64
THUMPD1-205ENST00000570231 P3H3Q8IVL6 736 aa11.03□□□□□ -0.64
THUMPD1-205ENST00000570231 IQGAP2Q13576 1575 aa11.03□□□□□ -0.64
THUMPD1-205ENST00000570231 PPP4R3BQ5MIZ7 849 aa11.02□□□□□ -0.65
THUMPD1-205ENST00000570231 CTTNBP2Q8WZ74 1663 aa11.01□□□□□ -0.65
THUMPD1-205ENST00000570231 AMER1Q5JTC6 1135 aaPredicted RBP11□□□□□ -0.65
THUMPD1-205ENST00000570231 UPF1Q92900 1129 aaKnown RBP eCLIP11□□□□□ -0.65
THUMPD1-205ENST00000570231 KCNH8Q96L42 1107 aa11□□□□□ -0.65
THUMPD1-205ENST00000570231 TTBK1Q5TCY1 1321 aaPredicted RBP11□□□□□ -0.65
THUMPD1-205ENST00000570231 KDM4FA0A1W2PPD8 638 aa10.99□□□□□ -0.65
THUMPD1-205ENST00000570231 ARHGAP33O14559 1287 aa10.99□□□□□ -0.65
THUMPD1-205ENST00000570231 OXER1Q8TDS5 423 aa10.99□□□□□ -0.65
THUMPD1-205ENST00000570231 DDX27Q96GQ7 796 aaKnown RBP10.99□□□□□ -0.65
THUMPD1-205ENST00000570231 ARHGAP35Q9NRY4 1499 aa10.99□□□□□ -0.65
THUMPD1-205ENST00000570231 JPH4Q96JJ6 628 aa10.98□□□□□ -0.65
THUMPD1-205ENST00000570231 LARP6Q9BRS8 491 aaKnown RBP10.98□□□□□ -0.65
THUMPD1-205ENST00000570231 NCKAP5LQ9HCH0 1330 aa10.98□□□□□ -0.65
THUMPD1-205ENST00000570231 FHOD3Q2V2M9 1422 aa10.98□□□□□ -0.65
THUMPD1-205ENST00000570231 AXIN2Q9Y2T1 843 aa10.97□□□□□ -0.65
THUMPD1-205ENST00000570231 ARAP1Q96P48 1450 aa10.97□□□□□ -0.65
THUMPD1-205ENST00000570231 CLASP1Q7Z460 1538 aa10.97□□□□□ -0.65
THUMPD1-205ENST00000570231 UGGT2Q9NYU1 1516 aa10.96□□□□□ -0.65
THUMPD1-205ENST00000570231 PRG4Q92954 1404 aaPredicted RBP10.95□□□□□ -0.66
THUMPD1-205ENST00000570231 EFCAB5A4FU69 1503 aa10.94□□□□□ -0.66
THUMPD1-205ENST00000570231 BBXQ8WY36 941 aaPredicted RBP10.94□□□□□ -0.66
THUMPD1-205ENST00000570231 DISP1Q96F81 1524 aa10.94□□□□□ -0.66
THUMPD1-205ENST00000570231 POTEEQ6S8J3 1075 aa10.93□□□□□ -0.66
THUMPD1-205ENST00000570231 CARMIL2Q6F5E8 1435 aa10.92□□□□□ -0.66
THUMPD1-205ENST00000570231 KIAA0556O60303 1618 aa10.92□□□□□ -0.66
THUMPD1-205ENST00000570231 SAMD9Q5K651 1589 aa10.92□□□□□ -0.66
THUMPD1-205ENST00000570231 MFSD10Q14728 455 aa10.92□□□□□ -0.66
THUMPD1-205ENST00000570231 ATP1B4Q9UN42 357 aaPredicted RBP10.91□□□□□ -0.66
THUMPD1-205ENST00000570231 ERCC6L2Q5T890 1561 aa10.9□□□□□ -0.66
THUMPD1-205ENST00000570231 TK2O00142 265 aa10.9□□□□□ -0.66
THUMPD1-205ENST00000570231 MAP3K9P80192 1104 aa10.9□□□□□ -0.66
THUMPD1-205ENST00000570231 ADGRD1Q6QNK2 874 aa10.9□□□□□ -0.66
THUMPD1-205ENST00000570231 ZNF454Q8N9F8 522 aa10.9□□□□□ -0.66
THUMPD1-205ENST00000570231 STAC3Q96MF2 364 aa10.9□□□□□ -0.66
THUMPD1-205ENST00000570231 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.9□□□□□ -0.66
THUMPD1-205ENST00000570231 VPS8Q8N3P4 1428 aa10.9□□□□□ -0.66
THUMPD1-205ENST00000570231 SHROOM2Q13796 1616 aa10.89□□□□□ -0.67
THUMPD1-205ENST00000570231 FMN1Q68DA7 1419 aa10.87□□□□□ -0.67
THUMPD1-205ENST00000570231 ARID3CA6NKF2 412 aa10.87□□□□□ -0.67
THUMPD1-205ENST00000570231 EVI5O60447 810 aa10.87□□□□□ -0.67
THUMPD1-205ENST00000570231 PSEN2P49810 448 aa10.87□□□□□ -0.67
THUMPD1-205ENST00000570231 KCNK17Q96T54 332 aa10.86□□□□□ -0.67
THUMPD1-205ENST00000570231 PCF11O94913 1555 aaKnown RBP10.86□□□□□ -0.67
THUMPD1-205ENST00000570231 PTPRGP23470 1445 aa10.85□□□□□ -0.67
THUMPD1-205ENST00000570231 PPARGC1BQ86YN6 1023 aaKnown RBP10.85□□□□□ -0.67
THUMPD1-205ENST00000570231 ANO8Q9HCE9 1232 aaPredicted RBP10.85□□□□□ -0.67
THUMPD1-205ENST00000570231 FOSBP53539 338 aa10.84□□□□□ -0.67
THUMPD1-205ENST00000570231 DMRTA1Q5VZB9 504 aa10.84□□□□□ -0.67
THUMPD1-205ENST00000570231 SPRYD3Q8NCJ5 442 aa10.84□□□□□ -0.67
THUMPD1-205ENST00000570231 PLB1Q6P1J6 1458 aa10.83□□□□□ -0.68
THUMPD1-205ENST00000570231 PTPREP23469 700 aa10.83□□□□□ -0.68
THUMPD1-205ENST00000570231 BCL2L12Q9HB09 334 aa10.83□□□□□ -0.68
THUMPD1-205ENST00000570231 CADPS2Q86UW7 1296 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms