RNA–Protein interactions for RNA: ENST00000570231.1

THUMPD1-205, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 1,040 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-205ENST00000570231 AEBP2Q6ZN18 517 aaPredicted RBP25.52■■□□□ 1.68
THUMPD1-205ENST00000570231 CHIC1Q5VXU3 224 aa24.5■■□□□ 1.51
THUMPD1-205ENST00000570231 SENP3Q9H4L4 574 aaPredicted RBP21.92■■□□□ 1.1
THUMPD1-205ENST00000570231 PHF23Q9BUL5 403 aaPredicted RBP21.59■■□□□ 1.05
THUMPD1-205ENST00000570231 FOXD1Q16676 465 aa20.29■□□□□ 0.84
THUMPD1-205ENST00000570231 PLPPR3Q6T4P5 718 aa19.72■□□□□ 0.75
THUMPD1-205ENST00000570231 PIAS4Q8N2W9 510 aaPredicted RBP19.08■□□□□ 0.64
THUMPD1-205ENST00000570231 MSH5O43196 834 aa19.07■□□□□ 0.64
THUMPD1-205ENST00000570231 PPP6R1Q9UPN7 881 aa19.04■□□□□ 0.64
THUMPD1-205ENST00000570231 ADRA2BP18089 450 aa19.03■□□□□ 0.64
THUMPD1-205ENST00000570231 POTEDQ86YR6 584 aa18.22■□□□□ 0.51
THUMPD1-205ENST00000570231 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
THUMPD1-205ENST00000570231 MAPK8IP2Q13387 824 aaPredicted RBP17.41■□□□□ 0.38
THUMPD1-205ENST00000570231 DMRT2Q9Y5R5 561 aa17.35■□□□□ 0.37
THUMPD1-205ENST00000570231 PPP4R3CPQ6ZMV5 832 aa17.26■□□□□ 0.35
THUMPD1-205ENST00000570231 CNKSR2Q8WXI2 1034 aa16.94■□□□□ 0.3
THUMPD1-205ENST00000570231 HOXD11P31277 338 aaPredicted RBP16.77■□□□□ 0.28
THUMPD1-205ENST00000570231 NCBP3Q53F19 620 aaKnown RBP16.76■□□□□ 0.27
THUMPD1-205ENST00000570231 RNF216Q9NWF9 866 aaPredicted RBP16.73■□□□□ 0.27
THUMPD1-205ENST00000570231 DCAF8L1A6NGE4 600 aa16.71■□□□□ 0.27
THUMPD1-205ENST00000570231 NPM3O75607 178 aaKnown RBP16.37■□□□□ 0.21
THUMPD1-205ENST00000570231 CACNB1Q02641 598 aaPredicted RBP16.25■□□□□ 0.19
THUMPD1-205ENST00000570231 DNAJC5BQ9UF47 199 aa16.23■□□□□ 0.19
THUMPD1-205ENST00000570231 RNF39Q9H2S5 420 aa16.19■□□□□ 0.18
THUMPD1-205ENST00000570231 KCNA4P22459 653 aa16.17■□□□□ 0.18
THUMPD1-205ENST00000570231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.06■□□□□ 0.16
THUMPD1-205ENST00000570231 C1QBPQ07021 282 aaKnown RBP16.04■□□□□ 0.16
THUMPD1-205ENST00000570231 NISCHQ9Y2I1 1504 aa16.04■□□□□ 0.16
THUMPD1-205ENST00000570231 U3KPZ7 1027 aaPredicted RBP15.64■□□□□ 0.09
THUMPD1-205ENST00000570231 SLC4A2P04920 1241 aa15.54■□□□□ 0.08
THUMPD1-205ENST00000570231 APLP2Q06481 763 aa15.45■□□□□ 0.06
THUMPD1-205ENST00000570231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.43■□□□□ 0.06
THUMPD1-205ENST00000570231 HNRNPUL2Q1KMD3 747 aaKnown RBP15.43■□□□□ 0.06
THUMPD1-205ENST00000570231 CAPN15O75808 1086 aa15.42■□□□□ 0.06
THUMPD1-205ENST00000570231 SLC4A1APQ9BWU0 796 aaKnown RBP15.39■□□□□ 0.05
THUMPD1-205ENST00000570231 SPINK5Q9NQ38 1064 aaPredicted RBP15.34■□□□□ 0.05
THUMPD1-205ENST00000570231 SAMD1Q6SPF0 538 aaPredicted RBP15.31■□□□□ 0.04
THUMPD1-205ENST00000570231 ZNF219Q9P2Y4 722 aaPredicted RBP15.23■□□□□ 0.03
THUMPD1-205ENST00000570231 MYCNP04198 464 aaPredicted RBP15.22■□□□□ 0.03
THUMPD1-205ENST00000570231 DSG3P32926 999 aa15.22■□□□□ 0.03
THUMPD1-205ENST00000570231 TRHP20396 242 aaPredicted RBP15.19■□□□□ 0.02
THUMPD1-205ENST00000570231 FOXD4L1Q9NU39 408 aa15.13■□□□□ 0.01
THUMPD1-205ENST00000570231 ABCB7O75027 752 aa15.01□□□□□ -0.01
THUMPD1-205ENST00000570231 POLA2Q14181 598 aa14.8□□□□□ -0.04
THUMPD1-205ENST00000570231 ZBTB22O15209 634 aa14.79□□□□□ -0.04
THUMPD1-205ENST00000570231 ATF5Q9Y2D1 282 aaPredicted RBP14.7□□□□□ -0.06
THUMPD1-205ENST00000570231 ATXN8OSP0DMR3 200 aa14.68□□□□□ -0.06
THUMPD1-205ENST00000570231 RBM42Q9BTD8 480 aaKnown RBP14.66□□□□□ -0.06
THUMPD1-205ENST00000570231 ZBTB12Q9Y330 459 aaPredicted RBP14.63□□□□□ -0.07
THUMPD1-205ENST00000570231 POTEHQ6S545 545 aa14.35□□□□□ -0.11
THUMPD1-205ENST00000570231 FBLN2P98095 1184 aa14.33□□□□□ -0.12
THUMPD1-205ENST00000570231 CSRNP3Q8WYN3 585 aa14.32□□□□□ -0.12
THUMPD1-205ENST00000570231 OSCARQ8IYS5 282 aa14.3□□□□□ -0.12
THUMPD1-205ENST00000570231 AKT1S1Q96B36 256 aa14.3□□□□□ -0.12
THUMPD1-205ENST00000570231 EHMT2Q96KQ7 1210 aa14.28□□□□□ -0.12
THUMPD1-205ENST00000570231 CHRDL2Q6WN34 429 aa14.17□□□□□ -0.14
THUMPD1-205ENST00000570231 SPDYE2BA6NHP3 402 aa14.14□□□□□ -0.15
THUMPD1-205ENST00000570231 SPDYE6P0CI01 402 aa14.14□□□□□ -0.15
THUMPD1-205ENST00000570231 SPDYE2Q495Y8 402 aa14.14□□□□□ -0.15
THUMPD1-205ENST00000570231 REM2Q8IYK8 340 aaPredicted RBP14.1□□□□□ -0.15
THUMPD1-205ENST00000570231 MKRN4PQ13434 485 aaPredicted RBP14.05□□□□□ -0.16
THUMPD1-205ENST00000570231 CCDC180Q9P1Z9 1646 aa14.04□□□□□ -0.16
THUMPD1-205ENST00000570231 ZNF692Q9BU19 519 aaPredicted RBP13.98□□□□□ -0.17
THUMPD1-205ENST00000570231 PITPNM1O00562 1244 aa13.94□□□□□ -0.18
THUMPD1-205ENST00000570231 SSUH2Q9Y2M2 353 aa13.89□□□□□ -0.19
THUMPD1-205ENST00000570231 SPDYE1Q8NFV5 336 aaPredicted RBP13.87□□□□□ -0.19
THUMPD1-205ENST00000570231 PIP4P2Q8N4L2 257 aa13.84□□□□□ -0.19
THUMPD1-205ENST00000570231 CLEC11AQ9Y240 323 aa13.81□□□□□ -0.2
THUMPD1-205ENST00000570231 FXR2P51116 673 aaKnown RBP eCLIP13.8□□□□□ -0.2
THUMPD1-205ENST00000570231 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
THUMPD1-205ENST00000570231 PRR29P0C7W0 189 aa13.63□□□□□ -0.23
THUMPD1-205ENST00000570231 PRKAR2AP13861 404 aaKnown RBP13.62□□□□□ -0.23
THUMPD1-205ENST00000570231 HAX1O00165 279 aa13.61□□□□□ -0.23
THUMPD1-205ENST00000570231 ABCC9O60706 1549 aa13.6□□□□□ -0.23
THUMPD1-205ENST00000570231 SPDYE4A6NLX3 237 aa13.58□□□□□ -0.24
THUMPD1-205ENST00000570231 SP7Q8TDD2 431 aaPredicted RBP13.54□□□□□ -0.24
THUMPD1-205ENST00000570231 STAG3Q9UJ98 1225 aa13.52□□□□□ -0.25
THUMPD1-205ENST00000570231 CHADLQ6NUI6 762 aa13.45□□□□□ -0.26
THUMPD1-205ENST00000570231 ZCCHC6Q5VYS8 1495 aaKnown RBP13.43□□□□□ -0.26
THUMPD1-205ENST00000570231 DCAF8L2P0C7V8 631 aa13.43□□□□□ -0.26
THUMPD1-205ENST00000570231 C19orf67A6NJJ6 358 aa13.34□□□□□ -0.27
THUMPD1-205ENST00000570231 FARP1Q9Y4F1 1045 aaPredicted RBP13.31□□□□□ -0.28
THUMPD1-205ENST00000570231 EVX2Q03828 476 aa13.29□□□□□ -0.28
THUMPD1-205ENST00000570231 CREBZFQ9NS37 354 aa13.23□□□□□ -0.29
THUMPD1-205ENST00000570231 CD44P16070 742 aaKnown RBP13.21□□□□□ -0.29
THUMPD1-205ENST00000570231 DCAF1Q9Y4B6 1507 aa13.21□□□□□ -0.29
THUMPD1-205ENST00000570231 PROM2Q8N271 834 aa13.2□□□□□ -0.3
THUMPD1-205ENST00000570231 NACADO15069 1562 aa13.15□□□□□ -0.3
THUMPD1-205ENST00000570231 NPM1P06748 294 aaKnown RBP eCLIP13.14□□□□□ -0.31
THUMPD1-205ENST00000570231 MYO15BQ96JP2 1530 aa13.13□□□□□ -0.31
THUMPD1-205ENST00000570231 RB1CC1Q8TDY2 1594 aa13.11□□□□□ -0.31
THUMPD1-205ENST00000570231 GABBR2O75899 941 aa13.11□□□□□ -0.31
THUMPD1-205ENST00000570231 CLCN6P51797 869 aa13.11□□□□□ -0.31
THUMPD1-205ENST00000570231 PAK3O75914 559 aaPredicted RBP13.09□□□□□ -0.31
THUMPD1-205ENST00000570231 PLEKHG5O94827 1062 aa13.08□□□□□ -0.32
THUMPD1-205ENST00000570231 FKBP8Q14318 412 aa13.06□□□□□ -0.32
THUMPD1-205ENST00000570231 ZRANB1Q9UGI0 708 aa13.06□□□□□ -0.32
THUMPD1-205ENST00000570231 SHROOM4Q9ULL8 1493 aa13.05□□□□□ -0.32
THUMPD1-205ENST00000570231 ZNF579Q8NAF0 562 aaKnown RBP13□□□□□ -0.33
THUMPD1-205ENST00000570231 SCRIBQ14160 1630 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms