RNA–Protein interactions for RNA: ENST00000563512.1

NSMCE1-205, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 4

Gene NSMCE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-205ENST00000563512 SUPT5HO00267 1087 aaKnown RBP14.21□□□□□ -0.13
NSMCE1-205ENST00000563512 VSIG10Q8N0Z9 540 aa14.21□□□□□ -0.13
NSMCE1-205ENST00000563512 PSDA5PKW4 1024 aaPredicted RBP14.2□□□□□ -0.14
NSMCE1-205ENST00000563512 TOPBP1Q92547 1522 aa14.19□□□□□ -0.14
NSMCE1-205ENST00000563512 KDM4FA0A1W2PPD8 638 aa14.18□□□□□ -0.14
NSMCE1-205ENST00000563512 P3H3Q8IVL6 736 aa14.18□□□□□ -0.14
NSMCE1-205ENST00000563512 CDAN1Q8IWY9 1227 aa14.16□□□□□ -0.14
NSMCE1-205ENST00000563512 PCDH10Q9P2E7 1040 aa14.15□□□□□ -0.14
NSMCE1-205ENST00000563512 ANO8Q9HCE9 1232 aaPredicted RBP14.14□□□□□ -0.15
NSMCE1-205ENST00000563512 KDM2AQ9Y2K7 1162 aa14.14□□□□□ -0.15
NSMCE1-205ENST00000563512 WDR97A6NE52 1622 aa14.13□□□□□ -0.15
NSMCE1-205ENST00000563512 POTEB3A0JP26 581 aa14.13□□□□□ -0.15
NSMCE1-205ENST00000563512 SPDYE16A6NNV3 312 aaPredicted RBP14.13□□□□□ -0.15
NSMCE1-205ENST00000563512 PPP4R3BQ5MIZ7 849 aa14.13□□□□□ -0.15
NSMCE1-205ENST00000563512 POTEBQ6S5H4 581 aa14.13□□□□□ -0.15
NSMCE1-205ENST00000563512 KCNV2Q8TDN2 545 aa14.13□□□□□ -0.15
NSMCE1-205ENST00000563512 BIVM-ERCC5R4GMW8 1640 aa14.12□□□□□ -0.15
NSMCE1-205ENST00000563512 ARHGEF1Q92888 912 aaKnown RBP14.12□□□□□ -0.15
NSMCE1-205ENST00000563512 ARIH1Q9Y4X5 557 aaPredicted RBP14.12□□□□□ -0.15
NSMCE1-205ENST00000563512 TARBP1Q13395 1621 aaKnown RBP14.12□□□□□ -0.15
NSMCE1-205ENST00000563512 ZNF687Q8N1G0 1237 aa14.11□□□□□ -0.15
NSMCE1-205ENST00000563512 ZNF454Q8N9F8 522 aa14.11□□□□□ -0.15
NSMCE1-205ENST00000563512 IFT140Q96RY7 1462 aa14.1□□□□□ -0.15
NSMCE1-205ENST00000563512 PDIA6Q15084 440 aa14.09□□□□□ -0.15
NSMCE1-205ENST00000563512 CUX1P39880 1505 aa14.08□□□□□ -0.16
NSMCE1-205ENST00000563512 EIF4G3O43432 1585 aaKnown RBP14.08□□□□□ -0.16
NSMCE1-205ENST00000563512 JPH4Q96JJ6 628 aa14.07□□□□□ -0.16
NSMCE1-205ENST00000563512 TOP2BQ02880 1626 aa14.06□□□□□ -0.16
NSMCE1-205ENST00000563512 POLA1P09884 1462 aaPredicted RBP14.06□□□□□ -0.16
NSMCE1-205ENST00000563512 FOSBP53539 338 aa14.05□□□□□ -0.16
NSMCE1-205ENST00000563512 DDX12PQ92771 950 aa14.03□□□□□ -0.16
NSMCE1-205ENST00000563512 KCNH8Q96L42 1107 aa14.03□□□□□ -0.16
NSMCE1-205ENST00000563512 PBRM1Q86U86 1689 aa14.01□□□□□ -0.17
NSMCE1-205ENST00000563512 FGD5Q6ZNL6 1462 aa14.01□□□□□ -0.17
NSMCE1-205ENST00000563512 PHF14O94880 888 aa14.01□□□□□ -0.17
NSMCE1-205ENST00000563512 PBX2P40425 430 aa14.01□□□□□ -0.17
NSMCE1-205ENST00000563512 ZDHHC16Q969W1 377 aa14.01□□□□□ -0.17
NSMCE1-205ENST00000563512 PTGER2P43116 358 aa14□□□□□ -0.17
NSMCE1-205ENST00000563512 SYNJ1O43426 1573 aa14□□□□□ -0.17
NSMCE1-205ENST00000563512 TYW1BQ6NUM6 668 aa13.99□□□□□ -0.17
NSMCE1-205ENST00000563512 FBXW7Q969H0 707 aa13.99□□□□□ -0.17
NSMCE1-205ENST00000563512 EPAS1Q99814 870 aa13.99□□□□□ -0.17
NSMCE1-205ENST00000563512 PCDHGA10Q9Y5H3 936 aa13.99□□□□□ -0.17
NSMCE1-205ENST00000563512 GRXCR2A6NFK2 248 aa13.98□□□□□ -0.17
NSMCE1-205ENST00000563512 ARHGAP33O14559 1287 aa13.97□□□□□ -0.17
NSMCE1-205ENST00000563512 CHD1O14646 1710 aa13.97□□□□□ -0.17
NSMCE1-205ENST00000563512 NBR1Q14596 966 aa13.96□□□□□ -0.17
NSMCE1-205ENST00000563512 AXIN2Q9Y2T1 843 aa13.96□□□□□ -0.17
NSMCE1-205ENST00000563512 ABCA5Q8WWZ7 1642 aa13.96□□□□□ -0.17
NSMCE1-205ENST00000563512 WRNQ14191 1432 aaPredicted RBP eCLIP13.96□□□□□ -0.18
NSMCE1-205ENST00000563512 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
NSMCE1-205ENST00000563512 KCNK17Q96T54 332 aa13.95□□□□□ -0.18
NSMCE1-205ENST00000563512 BCL2L12Q9HB09 334 aa13.95□□□□□ -0.18
NSMCE1-205ENST00000563512 PTPREP23469 700 aa13.94□□□□□ -0.18
NSMCE1-205ENST00000563512 KRTAP3-3Q9BYR6 98 aa13.94□□□□□ -0.18
NSMCE1-205ENST00000563512 KRTAP3-2Q9BYR7 98 aa13.94□□□□□ -0.18
NSMCE1-205ENST00000563512 ADAM33Q9BZ11 813 aa13.93□□□□□ -0.18
NSMCE1-205ENST00000563512 ABCA10Q8WWZ4 1543 aa13.92□□□□□ -0.18
NSMCE1-205ENST00000563512 SLC24A1O60721 1099 aa13.92□□□□□ -0.18
NSMCE1-205ENST00000563512 ANKRD13DQ6ZTN6 518 aa13.92□□□□□ -0.18
NSMCE1-205ENST00000563512 RBM33Q96EV2 1170 aaKnown RBP13.92□□□□□ -0.18
NSMCE1-205ENST00000563512 SOGA1O94964 1423 aa13.91□□□□□ -0.18
NSMCE1-205ENST00000563512 PSEN2P49810 448 aa13.9□□□□□ -0.18
NSMCE1-205ENST00000563512 LSM11P83369 360 aaKnown RBP eCLIP13.9□□□□□ -0.18
NSMCE1-205ENST00000563512 POTEEQ6S8J3 1075 aa13.9□□□□□ -0.18
NSMCE1-205ENST00000563512 RAD54L2Q9Y4B4 1467 aa13.9□□□□□ -0.18
NSMCE1-205ENST00000563512 MAP3K7O43318 606 aa13.88□□□□□ -0.19
NSMCE1-205ENST00000563512 SEMA3EO15041 775 aa13.87□□□□□ -0.19
NSMCE1-205ENST00000563512 EN1Q05925 392 aaPredicted RBP13.86□□□□□ -0.19
NSMCE1-205ENST00000563512 MAGI1Q96QZ7 1491 aaPredicted RBP13.86□□□□□ -0.19
NSMCE1-205ENST00000563512 MLLT3P42568 568 aaPredicted RBP13.85□□□□□ -0.19
NSMCE1-205ENST00000563512 C6orf132Q5T0Z8 1188 aa13.84□□□□□ -0.19
NSMCE1-205ENST00000563512 DMRTA1Q5VZB9 504 aa13.84□□□□□ -0.19
NSMCE1-205ENST00000563512 AQRO60306 1485 aaKnown RBP eCLIP13.84□□□□□ -0.19
NSMCE1-205ENST00000563512 GRIN2BQ13224 1484 aa13.83□□□□□ -0.2
NSMCE1-205ENST00000563512 SMYD5Q6GMV2 418 aa13.83□□□□□ -0.2
NSMCE1-205ENST00000563512 GAPVD1Q14C86 1478 aa13.82□□□□□ -0.2
NSMCE1-205ENST00000563512 OSBPP22059 807 aa13.82□□□□□ -0.2
NSMCE1-205ENST00000563512 PPP1R3GB7ZBB8 358 aa13.81□□□□□ -0.2
NSMCE1-205ENST00000563512 ERICH3Q5RHP9 1530 aa13.8□□□□□ -0.2
NSMCE1-205ENST00000563512 ADAMTS12P58397 1594 aa13.8□□□□□ -0.2
NSMCE1-205ENST00000563512 SNAPC4Q5SXM2 1469 aa13.8□□□□□ -0.2
NSMCE1-205ENST00000563512 TK2O00142 265 aa13.79□□□□□ -0.2
NSMCE1-205ENST00000563512 ADGRD1Q6QNK2 874 aa13.79□□□□□ -0.2
NSMCE1-205ENST00000563512 TSR1Q2NL82 804 aaKnown RBP13.78□□□□□ -0.2
NSMCE1-205ENST00000563512 STAC3Q96MF2 364 aa13.78□□□□□ -0.2
NSMCE1-205ENST00000563512 TDRD9Q8NDG6 1382 aaKnown RBP13.78□□□□□ -0.2
NSMCE1-205ENST00000563512 CUL7Q14999 1698 aa13.78□□□□□ -0.2
NSMCE1-205ENST00000563512 TESPA1A2RU30 521 aaPredicted RBP13.77□□□□□ -0.21
NSMCE1-205ENST00000563512 TULP1O00294 542 aaPredicted RBP13.77□□□□□ -0.21
NSMCE1-205ENST00000563512 SPNS2Q8IVW8 549 aa13.77□□□□□ -0.21
NSMCE1-205ENST00000563512 SYNJ2O15056 1496 aa13.76□□□□□ -0.21
NSMCE1-205ENST00000563512 COL9A1P20849 921 aa13.76□□□□□ -0.21
NSMCE1-205ENST00000563512 PRIM1P49642 420 aaKnown RBP13.75□□□□□ -0.21
NSMCE1-205ENST00000563512 ZBED2Q9BTP6 218 aa13.74□□□□□ -0.21
NSMCE1-205ENST00000563512 SLC4A5Q9BY07 1137 aa13.74□□□□□ -0.21
NSMCE1-205ENST00000563512 VPS9D1Q9Y2B5 631 aa13.74□□□□□ -0.21
NSMCE1-205ENST00000563512 CERKQ8TCT0 537 aa13.73□□□□□ -0.21
NSMCE1-205ENST00000563512 CLASP1Q7Z460 1538 aa13.71□□□□□ -0.21
NSMCE1-205ENST00000563512 NUTM2FA1L443 756 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms