RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 ROCK2O75116 1388 aaKnown RBP14.88□□□□□ -0.03
NEIL1-202ENST00000561643 ST20-MTHFSA0A0A6YYL1 179 aa14.86□□□□□ -0.03
NEIL1-202ENST00000561643 RSPH4AQ5TD94 716 aa14.86□□□□□ -0.03
NEIL1-202ENST00000561643 SAMD9LQ8IVG5 1584 aa14.85□□□□□ -0.03
NEIL1-202ENST00000561643 TMC1Q8TDI8 760 aa14.84□□□□□ -0.03
NEIL1-202ENST00000561643 MYT1LQ9UL68 1186 aa14.84□□□□□ -0.03
NEIL1-202ENST00000561643 FAM135AQ9P2D6 1515 aa14.84□□□□□ -0.03
NEIL1-202ENST00000561643 PREX2Q70Z35 1606 aa14.83□□□□□ -0.03
NEIL1-202ENST00000561643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.83□□□□□ -0.041e-6■■■■□ 19.3
NEIL1-202ENST00000561643 NBR1Q14596 966 aa14.83□□□□□ -0.04
NEIL1-202ENST00000561643 CDC42BPBQ9Y5S2 1711 aa14.83□□□□□ -0.04
NEIL1-202ENST00000561643 CCDC144AA2RUR9 1427 aa14.82□□□□□ -0.04
NEIL1-202ENST00000561643 ARHGAP5Q13017 1502 aa14.82□□□□□ -0.04
NEIL1-202ENST00000561643 RGL3Q3MIN7 710 aa14.81□□□□□ -0.04
NEIL1-202ENST00000561643 B4GALNT3Q6L9W6 998 aa14.81□□□□□ -0.04
NEIL1-202ENST00000561643 SYCP2Q9BX26 1530 aa14.81□□□□□ -0.04
NEIL1-202ENST00000561643 SENP3-EIF4A1A0A087X0R7 540 aa14.8□□□□□ -0.04
NEIL1-202ENST00000561643 SMG6Q86US8 1419 aaKnown RBP14.8□□□□□ -0.04
NEIL1-202ENST00000561643 PNISRQ8TF01 805 aaKnown RBP14.79□□□□□ -0.04
NEIL1-202ENST00000561643 NUDCQ9Y266 331 aa14.79□□□□□ -0.04
NEIL1-202ENST00000561643 TTC37Q6PGP7 1564 aa14.78□□□□□ -0.04
NEIL1-202ENST00000561643 PLEKHG5O94827 1062 aa14.77□□□□□ -0.04
NEIL1-202ENST00000561643 UBE2Q2Q8WVN8 375 aa14.77□□□□□ -0.04
NEIL1-202ENST00000561643 CHD1O14646 1710 aa14.77□□□□□ -0.04
NEIL1-202ENST00000561643 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.76□□□□□ -0.05
NEIL1-202ENST00000561643 RALBP1Q15311 655 aa14.76□□□□□ -0.05
NEIL1-202ENST00000561643 PRAG1Q86YV5 1406 aa14.76□□□□□ -0.05
NEIL1-202ENST00000561643 MYBBP1AQ9BQG0 1328 aaKnown RBP14.76□□□□□ -0.05
NEIL1-202ENST00000561643 EIF5BO60841 1220 aaKnown RBP14.75□□□□□ -0.05
NEIL1-202ENST00000561643 NBPF1Q3BBV0 1214 aa14.75□□□□□ -0.05
NEIL1-202ENST00000561643 KTN1Q86UP2 1357 aaKnown RBP14.74□□□□□ -0.05
NEIL1-202ENST00000561643 MAST1Q9Y2H9 1570 aa14.74□□□□□ -0.05
NEIL1-202ENST00000561643 BRD4O60885 1362 aaPredicted RBP14.74□□□□□ -0.05
NEIL1-202ENST00000561643 PLEKHH2Q8IVE3 1493 aa14.74□□□□□ -0.05
NEIL1-202ENST00000561643 PLA2R1Q13018 1463 aa14.73□□□□□ -0.05
NEIL1-202ENST00000561643 ABCC2Q92887 1545 aa14.73□□□□□ -0.05
NEIL1-202ENST00000561643 UNC13BO14795 1591 aa14.73□□□□□ -0.05
NEIL1-202ENST00000561643 OSCARQ8IYS5 282 aa14.72□□□□□ -0.05
NEIL1-202ENST00000561643 IL27Q8NEV9 243 aa14.72□□□□□ -0.05
NEIL1-202ENST00000561643 SHROOM2Q13796 1616 aa14.71□□□□□ -0.05
NEIL1-202ENST00000561643 TRPM1Q7Z4N2 1603 aa14.71□□□□□ -0.05
NEIL1-202ENST00000561643 A2MP01023 1474 aa14.71□□□□□ -0.05
NEIL1-202ENST00000561643 ERCC6L2Q5T890 1561 aa14.71□□□□□ -0.05
NEIL1-202ENST00000561643 MYO5CQ9NQX4 1742 aa14.71□□□□□ -0.06
NEIL1-202ENST00000561643 LRPPRCP42704 1394 aaKnown RBP14.7□□□□□ -0.06
NEIL1-202ENST00000561643 PAK3O75914 559 aaPredicted RBP14.7□□□□□ -0.06
NEIL1-202ENST00000561643 PLXNC1O60486 1568 aa14.7□□□□□ -0.06
NEIL1-202ENST00000561643 NLRP13Q86W25 1043 aa14.69□□□□□ -0.06
NEIL1-202ENST00000561643 DUOX2Q9NRD8 1548 aa14.69□□□□□ -0.06
NEIL1-202ENST00000561643 GPRASP1Q5JY77 1395 aa14.69□□□□□ -0.06
NEIL1-202ENST00000561643 RNF123Q5XPI4 1314 aa14.69□□□□□ -0.06
NEIL1-202ENST00000561643 EFCAB2Q5VUJ9 269 aa14.69□□□□□ -0.06
NEIL1-202ENST00000561643 NOP58Q9Y2X3 529 aaKnown RBP14.69□□□□□ -0.06
NEIL1-202ENST00000561643 E9PCH4 1651 aa14.69□□□□□ -0.06
NEIL1-202ENST00000561643 IQGAP3Q86VI3 1631 aa14.68□□□□□ -0.06
NEIL1-202ENST00000561643 PLCH2O75038 1416 aa14.66□□□□□ -0.06
NEIL1-202ENST00000561643 ERBINQ96RT1 1412 aa14.66□□□□□ -0.06
NEIL1-202ENST00000561643 PARD3Q8TEW0 1356 aa14.66□□□□□ -0.06
NEIL1-202ENST00000561643 DISP3Q9P2K9 1392 aa14.65□□□□□ -0.06
NEIL1-202ENST00000561643 COL17A1Q9UMD9 1497 aaPredicted RBP14.65□□□□□ -0.06
NEIL1-202ENST00000561643 CC2D1BQ5T0F9 858 aaKnown RBP14.65□□□□□ -0.06
NEIL1-202ENST00000561643 TESK2Q96S53 571 aa14.65□□□□□ -0.06
NEIL1-202ENST00000561643 PER1O15534 1290 aaPredicted RBP14.65□□□□□ -0.06
NEIL1-202ENST00000561643 TMF1P82094 1093 aa14.64□□□□□ -0.07
NEIL1-202ENST00000561643 PRDM15P57071 1507 aaPredicted RBP14.64□□□□□ -0.07
NEIL1-202ENST00000561643 EIF2AK4Q9P2K8 1649 aaKnown RBP14.63□□□□□ -0.07
NEIL1-202ENST00000561643 PANK3Q9H999 370 aa14.63□□□□□ -0.07
NEIL1-202ENST00000561643 ATP10AO60312 1499 aa14.63□□□□□ -0.07
NEIL1-202ENST00000561643 MAGI2Q86UL8 1455 aa14.63□□□□□ -0.07
NEIL1-202ENST00000561643 TRAPPC8Q9Y2L5 1435 aa14.62□□□□□ -0.07
NEIL1-202ENST00000561643 CYB5RLQ6IPT4 315 aa14.62□□□□□ -0.07
NEIL1-202ENST00000561643 LAMC1P11047 1609 aa14.62□□□□□ -0.07
NEIL1-202ENST00000561643 SPAG9O60271 1321 aaKnown RBP14.61□□□□□ -0.07
NEIL1-202ENST00000561643 ZCCHC11Q5TAX3 1644 aaKnown RBP14.61□□□□□ -0.07
NEIL1-202ENST00000561643 WASHC2CQ9Y4E1 1318 aa14.61□□□□□ -0.07
NEIL1-202ENST00000561643 ABCC1P33527 1531 aa14.6□□□□□ -0.07
NEIL1-202ENST00000561643 PKNOX2Q96KN3 472 aa14.6□□□□□ -0.07
NEIL1-202ENST00000561643 RTL5Q5HYW3 569 aaPredicted RBP14.6□□□□□ -0.07
NEIL1-202ENST00000561643 AFAP1Q8N556 730 aa14.59□□□□□ -0.07
NEIL1-202ENST00000561643 RRP1P56182 461 aaKnown RBP14.59□□□□□ -0.07
NEIL1-202ENST00000561643 RCAN3Q9UKA8 241 aa14.59□□□□□ -0.07
NEIL1-202ENST00000561643 PDE3BQ13370 1112 aa14.58□□□□□ -0.07
NEIL1-202ENST00000561643 UHRF1BP1LA0JNW5 1464 aa14.58□□□□□ -0.08
NEIL1-202ENST00000561643 CLASP1Q7Z460 1538 aa14.54□□□□□ -0.08
NEIL1-202ENST00000561643 CDCA7LQ96GN5 454 aa14.54□□□□□ -0.08
NEIL1-202ENST00000561643 EXOC6Q8TAG9 804 aa14.54□□□□□ -0.08
NEIL1-202ENST00000561643 RTEL1-TNFRSF6BF6WH68 1400 aa14.54□□□□□ -0.08
NEIL1-202ENST00000561643 KNSTRNQ9Y448 316 aa14.53□□□□□ -0.08
NEIL1-202ENST00000561643 RNF17Q9BXT8 1623 aaKnown RBP14.53□□□□□ -0.08
NEIL1-202ENST00000561643 ZFYVE16Q7Z3T8 1539 aa14.52□□□□□ -0.08
NEIL1-202ENST00000561643 KANK1Q14678 1352 aa14.52□□□□□ -0.09
NEIL1-202ENST00000561643 TRPM2O94759 1503 aa14.51□□□□□ -0.09
NEIL1-202ENST00000561643 CDCA8Q53HL2 280 aa14.51□□□□□ -0.09
NEIL1-202ENST00000561643 MADDQ8WXG6 1647 aa14.51□□□□□ -0.09
NEIL1-202ENST00000561643 BLMP54132 1417 aaPredicted RBP14.51□□□□□ -0.09
NEIL1-202ENST00000561643 SLC24A1O60721 1099 aa14.51□□□□□ -0.09
NEIL1-202ENST00000561643 KIF3BO15066 747 aa14.5□□□□□ -0.09
NEIL1-202ENST00000561643 STAC3Q96MF2 364 aa14.5□□□□□ -0.09
NEIL1-202ENST00000561643 INSRP06213 1382 aa14.5□□□□□ -0.09
NEIL1-202ENST00000561643 ARAP3Q8WWN8 1544 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms