RNA–Protein interactions for RNA: ENST00000560878.1

SPG21-212, Transcript of SPG21, maspardin, humanhuman

TSL 5

Gene SPG21, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-212ENST00000560878 LHX6Q9UPM6 363 aa8.17□□□□□ -1.1
SPG21-212ENST00000560878 SOGA1O94964 1423 aa8.17□□□□□ -1.1
SPG21-212ENST00000560878 ANO8Q9HCE9 1232 aaPredicted RBP8.15□□□□□ -1.1
SPG21-212ENST00000560878 WRNQ14191 1432 aaPredicted RBP eCLIP8.14□□□□□ -1.11
SPG21-212ENST00000560878 CAMK2BQ13554 666 aa8.14□□□□□ -1.11
SPG21-212ENST00000560878 MMRN1Q13201 1228 aa8.13□□□□□ -1.11
SPG21-212ENST00000560878 POLA1P09884 1462 aaPredicted RBP8.13□□□□□ -1.11
SPG21-212ENST00000560878 FGD5Q6ZNL6 1462 aa8.13□□□□□ -1.11
SPG21-212ENST00000560878 CUX1P39880 1505 aa8.12□□□□□ -1.11
SPG21-212ENST00000560878 RAD54L2Q9Y4B4 1467 aa8.11□□□□□ -1.11
SPG21-212ENST00000560878 TDRD9Q8NDG6 1382 aaKnown RBP8.1□□□□□ -1.11
SPG21-212ENST00000560878 PTGER2P43116 358 aa8.1□□□□□ -1.11
SPG21-212ENST00000560878 POTEEQ6S8J3 1075 aa8.1□□□□□ -1.11
SPG21-212ENST00000560878 AQRO60306 1485 aaKnown RBP eCLIP8.1□□□□□ -1.11
SPG21-212ENST00000560878 ZNF608Q9ULD9 1512 aaPredicted RBP8.09□□□□□ -1.11
SPG21-212ENST00000560878 PAXIP1Q6ZW49 1069 aaPredicted RBP8.09□□□□□ -1.11
SPG21-212ENST00000560878 CHMP7Q8WUX9 453 aaPredicted RBP8.09□□□□□ -1.11
SPG21-212ENST00000560878 EMILIN3Q9NT22 766 aa8.09□□□□□ -1.11
SPG21-212ENST00000560878 ARHGAP33O14559 1287 aa8.08□□□□□ -1.12
SPG21-212ENST00000560878 LSM11P83369 360 aaKnown RBP eCLIP8.08□□□□□ -1.12
SPG21-212ENST00000560878 PPP4R3BQ5MIZ7 849 aa8.08□□□□□ -1.12
SPG21-212ENST00000560878 UPF1Q92900 1129 aaKnown RBP eCLIP8.08□□□□□ -1.12
SPG21-212ENST00000560878 TOP2BQ02880 1626 aa8.07□□□□□ -1.12
SPG21-212ENST00000560878 TARBP1Q13395 1621 aaKnown RBP8.07□□□□□ -1.12
SPG21-212ENST00000560878 EIF4G3O43432 1585 aaKnown RBP8.06□□□□□ -1.12
SPG21-212ENST00000560878 EVI5O60447 810 aa8.06□□□□□ -1.12
SPG21-212ENST00000560878 FOSBP53539 338 aa8.06□□□□□ -1.12
SPG21-212ENST00000560878 ARIH1Q9Y4X5 557 aaPredicted RBP8.06□□□□□ -1.12
SPG21-212ENST00000560878 MAP3K9P80192 1104 aa8.05□□□□□ -1.12
SPG21-212ENST00000560878 JPH4Q96JJ6 628 aa8.05□□□□□ -1.12
SPG21-212ENST00000560878 CFAP44Q96MT7 982 aa8.05□□□□□ -1.12
SPG21-212ENST00000560878 GRIN2BQ13224 1484 aa8.05□□□□□ -1.12
SPG21-212ENST00000560878 GAPVD1Q14C86 1478 aa8.05□□□□□ -1.12
SPG21-212ENST00000560878 SYNJ1O43426 1573 aa8.05□□□□□ -1.12
SPG21-212ENST00000560878 WDR97A6NE52 1622 aa8.04□□□□□ -1.12
SPG21-212ENST00000560878 BIVM-ERCC5R4GMW8 1640 aa8.04□□□□□ -1.12
SPG21-212ENST00000560878 TK2O00142 265 aa8.04□□□□□ -1.12
SPG21-212ENST00000560878 ABCA10Q8WWZ4 1543 aa8.03□□□□□ -1.12
SPG21-212ENST00000560878 BCL2L12Q9HB09 334 aa8.03□□□□□ -1.12
SPG21-212ENST00000560878 SLC4A5Q9BY07 1137 aa8.02□□□□□ -1.13
SPG21-212ENST00000560878 SNAPC4Q5SXM2 1469 aa8.01□□□□□ -1.13
SPG21-212ENST00000560878 ZNF454Q8N9F8 522 aa8.01□□□□□ -1.13
SPG21-212ENST00000560878 MAGI1Q96QZ7 1491 aaPredicted RBP8□□□□□ -1.13
SPG21-212ENST00000560878 ANKRD13DQ6ZTN6 518 aa8□□□□□ -1.13
SPG21-212ENST00000560878 AXIN2Q9Y2T1 843 aa8□□□□□ -1.13
SPG21-212ENST00000560878 KIF27Q86VH2 1401 aa8□□□□□ -1.13
SPG21-212ENST00000560878 PHF14O94880 888 aa7.99□□□□□ -1.13
SPG21-212ENST00000560878 E2F4Q16254 413 aa7.99□□□□□ -1.13
SPG21-212ENST00000560878 ZDHHC16Q969W1 377 aa7.99□□□□□ -1.13
SPG21-212ENST00000560878 MYT1LQ9UL68 1186 aa7.99□□□□□ -1.13
SPG21-212ENST00000560878 HRO43593 1189 aa7.98□□□□□ -1.13
SPG21-212ENST00000560878 ADGRD1Q6QNK2 874 aa7.98□□□□□ -1.13
SPG21-212ENST00000560878 FBXW7Q969H0 707 aa7.98□□□□□ -1.13
SPG21-212ENST00000560878 KCNH8Q96L42 1107 aa7.98□□□□□ -1.13
SPG21-212ENST00000560878 SYNJ2O15056 1496 aa7.98□□□□□ -1.13
SPG21-212ENST00000560878 PBRM1Q86U86 1689 aa7.98□□□□□ -1.13
SPG21-212ENST00000560878 SPDYE16A6NNV3 312 aaPredicted RBP7.97□□□□□ -1.13
SPG21-212ENST00000560878 DPYSL4O14531 572 aa7.97□□□□□ -1.13
SPG21-212ENST00000560878 PDIA6Q15084 440 aa7.97□□□□□ -1.13
SPG21-212ENST00000560878 RNF166Q96A37 237 aaPredicted RBP7.97□□□□□ -1.13
SPG21-212ENST00000560878 PCDHGA10Q9Y5H3 936 aa7.97□□□□□ -1.13
SPG21-212ENST00000560878 ABCA5Q8WWZ7 1642 aa7.96□□□□□ -1.13
SPG21-212ENST00000560878 CHD1O14646 1710 aa7.96□□□□□ -1.14
SPG21-212ENST00000560878 PTPREP23469 700 aa7.96□□□□□ -1.14
SPG21-212ENST00000560878 PSEN2P49810 448 aa7.96□□□□□ -1.14
SPG21-212ENST00000560878 DMRTA1Q5VZB9 504 aa7.96□□□□□ -1.14
SPG21-212ENST00000560878 TYW1BQ6NUM6 668 aa7.96□□□□□ -1.14
SPG21-212ENST00000560878 EPAS1Q99814 870 aa7.96□□□□□ -1.14
SPG21-212ENST00000560878 WDR70Q9NW82 654 aa7.96□□□□□ -1.14
SPG21-212ENST00000560878 FHAD1B1AJZ9 1412 aa7.95□□□□□ -1.14
SPG21-212ENST00000560878 ERICH3Q5RHP9 1530 aa7.95□□□□□ -1.14
SPG21-212ENST00000560878 ADAM33Q9BZ11 813 aa7.95□□□□□ -1.14
SPG21-212ENST00000560878 KCNK17Q96T54 332 aa7.94□□□□□ -1.14
SPG21-212ENST00000560878 TSHZ2Q9NRE2 1034 aa7.93□□□□□ -1.14
SPG21-212ENST00000560878 VPS9D1Q9Y2B5 631 aa7.93□□□□□ -1.14
SPG21-212ENST00000560878 FAM9AQ8IZU1 332 aaPredicted RBP7.92□□□□□ -1.14
SPG21-212ENST00000560878 ZBED2Q9BTP6 218 aa7.92□□□□□ -1.14
SPG21-212ENST00000560878 GRIN2AQ12879 1464 aa7.92□□□□□ -1.14
SPG21-212ENST00000560878 PPP1R3GB7ZBB8 358 aa7.91□□□□□ -1.14
SPG21-212ENST00000560878 BHMG1C9JSJ3 638 aaPredicted RBP7.91□□□□□ -1.14
SPG21-212ENST00000560878 CYB5RLQ6IPT4 315 aa7.91□□□□□ -1.14
SPG21-212ENST00000560878 IGF1RP08069 1367 aa7.91□□□□□ -1.14
SPG21-212ENST00000560878 CARMIL1Q5VZK9 1371 aa7.91□□□□□ -1.14
SPG21-212ENST00000560878 ADAMTS12P58397 1594 aa7.91□□□□□ -1.14
SPG21-212ENST00000560878 ONECUT3O60422 494 aaPredicted RBP7.9□□□□□ -1.14
SPG21-212ENST00000560878 PLCB2Q00722 1185 aa7.9□□□□□ -1.14
SPG21-212ENST00000560878 CUL7Q14999 1698 aa7.89□□□□□ -1.15
SPG21-212ENST00000560878 C6orf132Q5T0Z8 1188 aa7.87□□□□□ -1.15
SPG21-212ENST00000560878 ARHGEF1Q92888 912 aaKnown RBP7.87□□□□□ -1.15
SPG21-212ENST00000560878 ARHGEF11O15085 1522 aa7.87□□□□□ -1.15
SPG21-212ENST00000560878 RIMBP3CA6NJZ7 1639 aa7.86□□□□□ -1.15
SPG21-212ENST00000560878 RIMBP3BA6NNM3 1639 aa7.86□□□□□ -1.15
SPG21-212ENST00000560878 RIMBP3Q9UFD9 1639 aa7.86□□□□□ -1.15
SPG21-212ENST00000560878 TTBK1Q5TCY1 1321 aaPredicted RBP7.86□□□□□ -1.15
SPG21-212ENST00000560878 EEA1Q15075 1411 aa7.86□□□□□ -1.15
SPG21-212ENST00000560878 EN1Q05925 392 aaPredicted RBP7.85□□□□□ -1.15
SPG21-212ENST00000560878 DDX12PQ92771 950 aa7.85□□□□□ -1.15
SPG21-212ENST00000560878 RAPGEF2Q9Y4G8 1499 aa7.85□□□□□ -1.15
SPG21-212ENST00000560878 CLASP1Q7Z460 1538 aa7.84□□□□□ -1.15
SPG21-212ENST00000560878 RUSC2Q8N2Y8 1516 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms