RNA–Protein interactions for RNA: ENST00000560878.1

SPG21-212, Transcript of SPG21, maspardin, humanhuman

TSL 5

Gene SPG21, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-212ENST00000560878 AEBP2Q6ZN18 517 aaPredicted RBP18.78■□□□□ 0.6
SPG21-212ENST00000560878 CHIC1Q5VXU3 224 aa18.12■□□□□ 0.49
SPG21-212ENST00000560878 SENP3Q9H4L4 574 aaPredicted RBP16.04■□□□□ 0.16
SPG21-212ENST00000560878 PHF23Q9BUL5 403 aaPredicted RBP15.87■□□□□ 0.13
SPG21-212ENST00000560878 FOXD1Q16676 465 aa14.87□□□□□ -0.03
SPG21-212ENST00000560878 PLPPR3Q6T4P5 718 aa14.58□□□□□ -0.08
SPG21-212ENST00000560878 POTEDQ86YR6 584 aa14.37□□□□□ -0.11
SPG21-212ENST00000560878 PPP6R1Q9UPN7 881 aa14.07□□□□□ -0.16
SPG21-212ENST00000560878 ADRA2BP18089 450 aa14□□□□□ -0.17
SPG21-212ENST00000560878 PIAS4Q8N2W9 510 aaPredicted RBP13.91□□□□□ -0.18
SPG21-212ENST00000560878 MSH5O43196 834 aa13.88□□□□□ -0.19
SPG21-212ENST00000560878 SCAF1Q9H7N4 1312 aaKnown RBP12.9□□□□□ -0.34
SPG21-212ENST00000560878 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
SPG21-212ENST00000560878 MAPK8IP2Q13387 824 aaPredicted RBP12.77□□□□□ -0.37
SPG21-212ENST00000560878 DMRT2Q9Y5R5 561 aa12.76□□□□□ -0.37
SPG21-212ENST00000560878 CNKSR2Q8WXI2 1034 aa12.53□□□□□ -0.4
SPG21-212ENST00000560878 HOXD11P31277 338 aaPredicted RBP12.41□□□□□ -0.42
SPG21-212ENST00000560878 NCBP3Q53F19 620 aaKnown RBP12.39□□□□□ -0.43
SPG21-212ENST00000560878 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
SPG21-212ENST00000560878 NPM3O75607 178 aaKnown RBP12.18□□□□□ -0.46
SPG21-212ENST00000560878 KCNA4P22459 653 aa12.12□□□□□ -0.47
SPG21-212ENST00000560878 DNAJC5BQ9UF47 199 aa12.09□□□□□ -0.47
SPG21-212ENST00000560878 DCAF8L1A6NGE4 600 aa12.04□□□□□ -0.48
SPG21-212ENST00000560878 RNF39Q9H2S5 420 aa11.86□□□□□ -0.51
SPG21-212ENST00000560878 CACNB1Q02641 598 aaPredicted RBP11.73□□□□□ -0.53
SPG21-212ENST00000560878 C1QBPQ07021 282 aaKnown RBP11.73□□□□□ -0.53
SPG21-212ENST00000560878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.71□□□□□ -0.53
SPG21-212ENST00000560878 SLC4A2P04920 1241 aa11.58□□□□□ -0.56
SPG21-212ENST00000560878 U3KPZ7 1027 aaPredicted RBP11.53□□□□□ -0.56
SPG21-212ENST00000560878 SLC4A1APQ9BWU0 796 aaKnown RBP11.49□□□□□ -0.57
SPG21-212ENST00000560878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.35□□□□□ -0.59
SPG21-212ENST00000560878 HNRNPUL2Q1KMD3 747 aaKnown RBP11.35□□□□□ -0.59
SPG21-212ENST00000560878 APLP2Q06481 763 aa11.3□□□□□ -0.6
SPG21-212ENST00000560878 MYCNP04198 464 aaPredicted RBP11.29□□□□□ -0.6
SPG21-212ENST00000560878 FOXD4L1Q9NU39 408 aa11.29□□□□□ -0.6
SPG21-212ENST00000560878 SAMD1Q6SPF0 538 aaPredicted RBP11.28□□□□□ -0.6
SPG21-212ENST00000560878 NISCHQ9Y2I1 1504 aa11.25□□□□□ -0.61
SPG21-212ENST00000560878 SPINK5Q9NQ38 1064 aaPredicted RBP11.24□□□□□ -0.61
SPG21-212ENST00000560878 CAPN15O75808 1086 aa11.19□□□□□ -0.62
SPG21-212ENST00000560878 DSG3P32926 999 aa11.16□□□□□ -0.62
SPG21-212ENST00000560878 ZNF219Q9P2Y4 722 aaPredicted RBP11.16□□□□□ -0.62
SPG21-212ENST00000560878 ZBTB22O15209 634 aa11.15□□□□□ -0.62
SPG21-212ENST00000560878 POTEHQ6S545 545 aa11.07□□□□□ -0.64
SPG21-212ENST00000560878 TRHP20396 242 aaPredicted RBP11.05□□□□□ -0.64
SPG21-212ENST00000560878 ATXN8OSP0DMR3 200 aa11.01□□□□□ -0.65
SPG21-212ENST00000560878 ATF5Q9Y2D1 282 aaPredicted RBP10.93□□□□□ -0.66
SPG21-212ENST00000560878 ABCB7O75027 752 aa10.92□□□□□ -0.66
SPG21-212ENST00000560878 CSRNP3Q8WYN3 585 aa10.88□□□□□ -0.67
SPG21-212ENST00000560878 POLA2Q14181 598 aa10.86□□□□□ -0.67
SPG21-212ENST00000560878 ZBTB12Q9Y330 459 aaPredicted RBP10.76□□□□□ -0.69
SPG21-212ENST00000560878 EHMT2Q96KQ7 1210 aa10.72□□□□□ -0.69
SPG21-212ENST00000560878 RBM42Q9BTD8 480 aaKnown RBP10.67□□□□□ -0.7
SPG21-212ENST00000560878 FBLN2P98095 1184 aa10.54□□□□□ -0.72
SPG21-212ENST00000560878 MKRN4PQ13434 485 aaPredicted RBP10.49□□□□□ -0.73
SPG21-212ENST00000560878 AKT1S1Q96B36 256 aa10.49□□□□□ -0.73
SPG21-212ENST00000560878 OSCARQ8IYS5 282 aa10.48□□□□□ -0.73
SPG21-212ENST00000560878 SPDYE2BA6NHP3 402 aa10.44□□□□□ -0.74
SPG21-212ENST00000560878 SPDYE6P0CI01 402 aa10.44□□□□□ -0.74
SPG21-212ENST00000560878 SPDYE2Q495Y8 402 aa10.44□□□□□ -0.74
SPG21-212ENST00000560878 REM2Q8IYK8 340 aaPredicted RBP10.34□□□□□ -0.75
SPG21-212ENST00000560878 SSUH2Q9Y2M2 353 aa10.33□□□□□ -0.76
SPG21-212ENST00000560878 CHRDL2Q6WN34 429 aa10.29□□□□□ -0.76
SPG21-212ENST00000560878 ZNF692Q9BU19 519 aaPredicted RBP10.27□□□□□ -0.77
SPG21-212ENST00000560878 PITPNM1O00562 1244 aa10.2□□□□□ -0.78
SPG21-212ENST00000560878 SPDYE1Q8NFV5 336 aaPredicted RBP10.17□□□□□ -0.78
SPG21-212ENST00000560878 FXR2P51116 673 aaKnown RBP eCLIP10.14□□□□□ -0.79
SPG21-212ENST00000560878 PABPN1Q86U42 306 aaKnown RBP eCLIP10.12□□□□□ -0.79
SPG21-212ENST00000560878 PIP4P2Q8N4L2 257 aa10.1□□□□□ -0.79
SPG21-212ENST00000560878 SPDYE4A6NLX3 237 aa10.09□□□□□ -0.79
SPG21-212ENST00000560878 CLEC11AQ9Y240 323 aa10.02□□□□□ -0.81
SPG21-212ENST00000560878 PROM2Q8N271 834 aa10.01□□□□□ -0.81
SPG21-212ENST00000560878 STAG3Q9UJ98 1225 aa9.99□□□□□ -0.81
SPG21-212ENST00000560878 CCDC180Q9P1Z9 1646 aa9.98□□□□□ -0.81
SPG21-212ENST00000560878 PRR29P0C7W0 189 aa9.96□□□□□ -0.82
SPG21-212ENST00000560878 PRKAR2AP13861 404 aaKnown RBP9.93□□□□□ -0.82
SPG21-212ENST00000560878 SP7Q8TDD2 431 aaPredicted RBP9.89□□□□□ -0.83
SPG21-212ENST00000560878 ABCC9O60706 1549 aa9.82□□□□□ -0.84
SPG21-212ENST00000560878 CHADLQ6NUI6 762 aa9.81□□□□□ -0.84
SPG21-212ENST00000560878 HAX1O00165 279 aa9.8□□□□□ -0.84
SPG21-212ENST00000560878 CREBZFQ9NS37 354 aa9.8□□□□□ -0.84
SPG21-212ENST00000560878 C19orf67A6NJJ6 358 aa9.79□□□□□ -0.84
SPG21-212ENST00000560878 FKBP8Q14318 412 aa9.78□□□□□ -0.84
SPG21-212ENST00000560878 FARP1Q9Y4F1 1045 aaPredicted RBP9.78□□□□□ -0.84
SPG21-212ENST00000560878 EVX2Q03828 476 aa9.71□□□□□ -0.86
SPG21-212ENST00000560878 MNX1P50219 401 aaPredicted RBP9.7□□□□□ -0.86
SPG21-212ENST00000560878 NPM1P06748 294 aaKnown RBP eCLIP9.64□□□□□ -0.87
SPG21-212ENST00000560878 DCAF8L2P0C7V8 631 aa9.63□□□□□ -0.87
SPG21-212ENST00000560878 CLCN6P51797 869 aa9.63□□□□□ -0.87
SPG21-212ENST00000560878 CD44P16070 742 aaKnown RBP9.62□□□□□ -0.87
SPG21-212ENST00000560878 FBXO3Q9UK99 471 aa9.62□□□□□ -0.87
SPG21-212ENST00000560878 PLEKHG5O94827 1062 aa9.58□□□□□ -0.88
SPG21-212ENST00000560878 MIER1Q8N108 512 aa9.57□□□□□ -0.88
SPG21-212ENST00000560878 ZNF579Q8NAF0 562 aaKnown RBP9.56□□□□□ -0.88
SPG21-212ENST00000560878 PLSCR2Q9NRY7 297 aa9.55□□□□□ -0.88
SPG21-212ENST00000560878 GABBR2O75899 941 aa9.54□□□□□ -0.88
SPG21-212ENST00000560878 ZBTB47Q9UFB7 747 aaPredicted RBP9.53□□□□□ -0.88
SPG21-212ENST00000560878 PAK3O75914 559 aaPredicted RBP9.51□□□□□ -0.89
SPG21-212ENST00000560878 PLCD3Q8N3E9 789 aa9.51□□□□□ -0.89
SPG21-212ENST00000560878 ZRANB1Q9UGI0 708 aa9.51□□□□□ -0.89
SPG21-212ENST00000560878 VASPP50552 380 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms