RNA–Protein interactions for RNA: ENST00000559196.1

SEMA6D-213, Transcript of semaphorin 6D, humanhuman

TSL 2

Gene SEMA6D, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-213ENST00000559196 CFTRP13569 1480 aa10.36□□□□□ -0.75
SEMA6D-213ENST00000559196 BHMG1C9JSJ3 638 aaPredicted RBP10.34□□□□□ -0.75
SEMA6D-213ENST00000559196 UPF1Q92900 1129 aaKnown RBP eCLIP10.34□□□□□ -0.75
SEMA6D-213ENST00000559196 KCNK17Q96T54 332 aa10.33□□□□□ -0.76
SEMA6D-213ENST00000559196 THOC2Q8NI27 1593 aaKnown RBP10.32□□□□□ -0.76
SEMA6D-213ENST00000559196 JPH4Q96JJ6 628 aa10.32□□□□□ -0.76
SEMA6D-213ENST00000559196 PLA2G2EQ9NZK7 142 aa10.32□□□□□ -0.76
SEMA6D-213ENST00000559196 ZNF454Q8N9F8 522 aa10.31□□□□□ -0.76
SEMA6D-213ENST00000559196 ZBED2Q9BTP6 218 aa10.3□□□□□ -0.76
SEMA6D-213ENST00000559196 EVI5O60447 810 aa10.29□□□□□ -0.76
SEMA6D-213ENST00000559196 EMILIN3Q9NT22 766 aa10.29□□□□□ -0.76
SEMA6D-213ENST00000559196 DDX27Q96GQ7 796 aaKnown RBP10.28□□□□□ -0.76
SEMA6D-213ENST00000559196 LARP6Q9BRS8 491 aaKnown RBP10.28□□□□□ -0.76
SEMA6D-213ENST00000559196 ERCC6Q03468 1493 aa10.28□□□□□ -0.76
SEMA6D-213ENST00000559196 FANCD2Q9BXW9 1451 aa10.28□□□□□ -0.76
SEMA6D-213ENST00000559196 CADPS2Q86UW7 1296 aa10.26□□□□□ -0.77
SEMA6D-213ENST00000559196 ADAM33Q9BZ11 813 aa10.26□□□□□ -0.77
SEMA6D-213ENST00000559196 PDS5BQ9NTI5 1447 aa10.25□□□□□ -0.77
SEMA6D-213ENST00000559196 PTPREP23469 700 aa10.25□□□□□ -0.77
SEMA6D-213ENST00000559196 KCTD12Q96CX2 325 aaKnown RBP10.25□□□□□ -0.77
SEMA6D-213ENST00000559196 IFFO2Q5TF58 517 aa10.24□□□□□ -0.77
SEMA6D-213ENST00000559196 ZDHHC16Q969W1 377 aa10.24□□□□□ -0.77
SEMA6D-213ENST00000559196 KCNH8Q96L42 1107 aa10.24□□□□□ -0.77
SEMA6D-213ENST00000559196 CEP164Q9UPV0 1460 aa10.23□□□□□ -0.77
SEMA6D-213ENST00000559196 URB2Q14146 1524 aaKnown RBP10.23□□□□□ -0.77
SEMA6D-213ENST00000559196 CAMK2BQ13554 666 aa10.23□□□□□ -0.77
SEMA6D-213ENST00000559196 PCDHGA10Q9Y5H3 936 aa10.21□□□□□ -0.77
SEMA6D-213ENST00000559196 WDR62O43379 1518 aa10.2□□□□□ -0.78
SEMA6D-213ENST00000559196 THSD4Q6ZMP0 1018 aa10.2□□□□□ -0.78
SEMA6D-213ENST00000559196 MRC2Q9UBG0 1479 aa10.2□□□□□ -0.78
SEMA6D-213ENST00000559196 ABCC8Q09428 1581 aa10.19□□□□□ -0.78
SEMA6D-213ENST00000559196 MAP3K9P80192 1104 aa10.18□□□□□ -0.78
SEMA6D-213ENST00000559196 PPP1R3GB7ZBB8 358 aa10.17□□□□□ -0.78
SEMA6D-213ENST00000559196 CUX1P39880 1505 aa10.17□□□□□ -0.78
SEMA6D-213ENST00000559196 STAC3Q96MF2 364 aa10.16□□□□□ -0.78
SEMA6D-213ENST00000559196 DNMBPQ6XZF7 1577 aa10.16□□□□□ -0.78
SEMA6D-213ENST00000559196 TOPBP1Q92547 1522 aa10.16□□□□□ -0.78
SEMA6D-213ENST00000559196 PHF14O94880 888 aa10.15□□□□□ -0.78
SEMA6D-213ENST00000559196 COL9A1P20849 921 aa10.15□□□□□ -0.78
SEMA6D-213ENST00000559196 SYNJ1O43426 1573 aa10.14□□□□□ -0.79
SEMA6D-213ENST00000559196 BIVM-ERCC5R4GMW8 1640 aa10.14□□□□□ -0.79
SEMA6D-213ENST00000559196 CUX2O14529 1486 aa10.13□□□□□ -0.79
SEMA6D-213ENST00000559196 FBXW7Q969H0 707 aa10.13□□□□□ -0.79
SEMA6D-213ENST00000559196 RABGEF1Q9UJ41 708 aa10.13□□□□□ -0.79
SEMA6D-213ENST00000559196 TYW1BQ6NUM6 668 aa10.12□□□□□ -0.79
SEMA6D-213ENST00000559196 MRPL50Q8N5N7 158 aaKnown RBP10.12□□□□□ -0.79
SEMA6D-213ENST00000559196 ONECUT3O60422 494 aaPredicted RBP10.11□□□□□ -0.79
SEMA6D-213ENST00000559196 PTPN5P54829 565 aa10.11□□□□□ -0.79
SEMA6D-213ENST00000559196 WNT2BQ93097 391 aa10.11□□□□□ -0.79
SEMA6D-213ENST00000559196 WDR97A6NE52 1622 aa10.11□□□□□ -0.79
SEMA6D-213ENST00000559196 TARBP1Q13395 1621 aaKnown RBP10.11□□□□□ -0.79
SEMA6D-213ENST00000559196 RGS20O76081 388 aa10.1□□□□□ -0.79
SEMA6D-213ENST00000559196 NBPF3Q9H094 633 aa10.1□□□□□ -0.79
SEMA6D-213ENST00000559196 TOP2BQ02880 1626 aa10.1□□□□□ -0.79
SEMA6D-213ENST00000559196 PROX2Q3B8N5 592 aa10.09□□□□□ -0.79
SEMA6D-213ENST00000559196 EPAS1Q99814 870 aa10.08□□□□□ -0.8
SEMA6D-213ENST00000559196 POLA1P09884 1462 aaPredicted RBP10.07□□□□□ -0.8
SEMA6D-213ENST00000559196 FGD5Q6ZNL6 1462 aa10.07□□□□□ -0.8
SEMA6D-213ENST00000559196 LAPTM4BQ86VI4 370 aa10.07□□□□□ -0.8
SEMA6D-213ENST00000559196 RAD54L2Q9Y4B4 1467 aa10.06□□□□□ -0.8
SEMA6D-213ENST00000559196 C6orf132Q5T0Z8 1188 aa10.06□□□□□ -0.8
SEMA6D-213ENST00000559196 A0A0G2JS52 829 aa10.05□□□□□ -0.8
SEMA6D-213ENST00000559196 DPYSL4O14531 572 aa10.05□□□□□ -0.8
SEMA6D-213ENST00000559196 BBXQ8WY36 941 aaPredicted RBP10.05□□□□□ -0.8
SEMA6D-213ENST00000559196 WRNQ14191 1432 aaPredicted RBP eCLIP10.05□□□□□ -0.8
SEMA6D-213ENST00000559196 ZNF608Q9ULD9 1512 aaPredicted RBP10.04□□□□□ -0.8
SEMA6D-213ENST00000559196 ITGBL1O95965 494 aaPredicted RBP10.04□□□□□ -0.8
SEMA6D-213ENST00000559196 GOLGA8CPA6NN73 597 aa10.03□□□□□ -0.8
SEMA6D-213ENST00000559196 EIF4G3O43432 1585 aaKnown RBP10.02□□□□□ -0.81
SEMA6D-213ENST00000559196 SOWAHBA6NEL2 793 aa10.02□□□□□ -0.81
SEMA6D-213ENST00000559196 KIAA1468Q9P260 1216 aa10.02□□□□□ -0.81
SEMA6D-213ENST00000559196 PBRM1Q86U86 1689 aa10.02□□□□□ -0.81
SEMA6D-213ENST00000559196 ARIH1Q9Y4X5 557 aaPredicted RBP10.01□□□□□ -0.81
SEMA6D-213ENST00000559196 PDIA6Q15084 440 aa10□□□□□ -0.81
SEMA6D-213ENST00000559196 SOGA1O94964 1423 aa9.99□□□□□ -0.81
SEMA6D-213ENST00000559196 IFT140Q96RY7 1462 aa9.99□□□□□ -0.81
SEMA6D-213ENST00000559196 TRIM6-TRIM34B2RNG4 842 aa9.99□□□□□ -0.81
SEMA6D-213ENST00000559196 ANKK1Q8NFD2 765 aa9.99□□□□□ -0.81
SEMA6D-213ENST00000559196 ZFRQ96KR1 1074 aaKnown RBP9.99□□□□□ -0.81
SEMA6D-213ENST00000559196 ABCA5Q8WWZ7 1642 aa9.98□□□□□ -0.81
SEMA6D-213ENST00000559196 NYAP1Q6ZVC0 841 aa9.97□□□□□ -0.81
SEMA6D-213ENST00000559196 AQRO60306 1485 aaKnown RBP eCLIP9.97□□□□□ -0.81
SEMA6D-213ENST00000559196 CHD1O14646 1710 aa9.96□□□□□ -0.81
SEMA6D-213ENST00000559196 BCAMP50895 628 aa9.96□□□□□ -0.82
SEMA6D-213ENST00000559196 EN1Q05925 392 aaPredicted RBP9.96□□□□□ -0.82
SEMA6D-213ENST00000559196 ABCA10Q8WWZ4 1543 aa9.95□□□□□ -0.82
SEMA6D-213ENST00000559196 TDRD9Q8NDG6 1382 aaKnown RBP9.94□□□□□ -0.82
SEMA6D-213ENST00000559196 SPDYE16A6NNV3 312 aaPredicted RBP9.94□□□□□ -0.82
SEMA6D-213ENST00000559196 FAM98CQ17RN3 349 aaKnown RBP9.94□□□□□ -0.82
SEMA6D-213ENST00000559196 DDX12PQ92771 950 aa9.94□□□□□ -0.82
SEMA6D-213ENST00000559196 PRIM1P49642 420 aaKnown RBP9.93□□□□□ -0.82
SEMA6D-213ENST00000559196 TSKSQ9UJT2 592 aa9.93□□□□□ -0.82
SEMA6D-213ENST00000559196 WBP1LQ9NX94 342 aa9.92□□□□□ -0.82
SEMA6D-213ENST00000559196 SEPT9Q9UHD8 586 aaPredicted RBP9.92□□□□□ -0.82
SEMA6D-213ENST00000559196 RUSC2Q8N2Y8 1516 aa9.92□□□□□ -0.82
SEMA6D-213ENST00000559196 TSR1Q2NL82 804 aaKnown RBP9.91□□□□□ -0.82
SEMA6D-213ENST00000559196 RBM33Q96EV2 1170 aaKnown RBP9.91□□□□□ -0.82
SEMA6D-213ENST00000559196 SPRYD3Q8NCJ5 442 aa9.9□□□□□ -0.82
SEMA6D-213ENST00000559196 FAM198AQ9UFP1 575 aa9.9□□□□□ -0.82
SEMA6D-213ENST00000559196 GAPVD1Q14C86 1478 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms