RNA–Protein interactions for RNA: ENST00000559196.1

SEMA6D-213, Transcript of semaphorin 6D, humanhuman

TSL 2

Gene SEMA6D, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-213ENST00000559196 AEBP2Q6ZN18 517 aaPredicted RBP25.26■■□□□ 1.63
SEMA6D-213ENST00000559196 CHIC1Q5VXU3 224 aa23.91■■□□□ 1.42
SEMA6D-213ENST00000559196 SENP3Q9H4L4 574 aaPredicted RBP21.46■■□□□ 1.03
SEMA6D-213ENST00000559196 PHF23Q9BUL5 403 aaPredicted RBP21.19■□□□□ 0.98
SEMA6D-213ENST00000559196 FOXD1Q16676 465 aa20.06■□□□□ 0.8
SEMA6D-213ENST00000559196 PLPPR3Q6T4P5 718 aa19.02■□□□□ 0.64
SEMA6D-213ENST00000559196 PPP6R1Q9UPN7 881 aa18.75■□□□□ 0.59
SEMA6D-213ENST00000559196 MSH5O43196 834 aa18.72■□□□□ 0.59
SEMA6D-213ENST00000559196 ADRA2BP18089 450 aa18.61■□□□□ 0.57
SEMA6D-213ENST00000559196 PIAS4Q8N2W9 510 aaPredicted RBP18.6■□□□□ 0.57
SEMA6D-213ENST00000559196 POTEDQ86YR6 584 aa18.39■□□□□ 0.53
SEMA6D-213ENST00000559196 MAPK8IP2Q13387 824 aaPredicted RBP17.12■□□□□ 0.33
SEMA6D-213ENST00000559196 DMRT2Q9Y5R5 561 aa17.07■□□□□ 0.32
SEMA6D-213ENST00000559196 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.31
SEMA6D-213ENST00000559196 PPP4R3CPQ6ZMV5 832 aa16.67■□□□□ 0.26
SEMA6D-213ENST00000559196 HOXD11P31277 338 aaPredicted RBP16.46■□□□□ 0.23
SEMA6D-213ENST00000559196 CNKSR2Q8WXI2 1034 aa16.38■□□□□ 0.21
SEMA6D-213ENST00000559196 RNF216Q9NWF9 866 aaPredicted RBP16.28■□□□□ 0.2
SEMA6D-213ENST00000559196 DCAF8L1A6NGE4 600 aa16.09■□□□□ 0.17
SEMA6D-213ENST00000559196 RNF39Q9H2S5 420 aa16.05■□□□□ 0.16
SEMA6D-213ENST00000559196 CACNB1Q02641 598 aaPredicted RBP16■□□□□ 0.15
SEMA6D-213ENST00000559196 DNAJC5BQ9UF47 199 aa15.99■□□□□ 0.15
SEMA6D-213ENST00000559196 NCBP3Q53F19 620 aaKnown RBP15.95■□□□□ 0.14
SEMA6D-213ENST00000559196 NPM3O75607 178 aaKnown RBP15.81■□□□□ 0.12
SEMA6D-213ENST00000559196 C1QBPQ07021 282 aaKnown RBP15.77■□□□□ 0.12
SEMA6D-213ENST00000559196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.48■□□□□ 0.07
SEMA6D-213ENST00000559196 KCNA4P22459 653 aa15.44■□□□□ 0.06
SEMA6D-213ENST00000559196 U3KPZ7 1027 aaPredicted RBP15.29■□□□□ 0.04
SEMA6D-213ENST00000559196 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
SEMA6D-213ENST00000559196 SPINK5Q9NQ38 1064 aaPredicted RBP15.04■□□□□ -0
SEMA6D-213ENST00000559196 DSG3P32926 999 aa14.99□□□□□ -0.01
SEMA6D-213ENST00000559196 CAPN15O75808 1086 aa14.9□□□□□ -0.02
SEMA6D-213ENST00000559196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.75□□□□□ -0.05
SEMA6D-213ENST00000559196 HNRNPUL2Q1KMD3 747 aaKnown RBP14.75□□□□□ -0.05
SEMA6D-213ENST00000559196 APLP2Q06481 763 aa14.73□□□□□ -0.05
SEMA6D-213ENST00000559196 ZNF219Q9P2Y4 722 aaPredicted RBP14.7□□□□□ -0.06
SEMA6D-213ENST00000559196 SAMD1Q6SPF0 538 aaPredicted RBP14.68□□□□□ -0.06
SEMA6D-213ENST00000559196 TRHP20396 242 aaPredicted RBP14.64□□□□□ -0.07
SEMA6D-213ENST00000559196 MYCNP04198 464 aaPredicted RBP14.58□□□□□ -0.08
SEMA6D-213ENST00000559196 ABCB7O75027 752 aa14.56□□□□□ -0.08
SEMA6D-213ENST00000559196 SLC4A1APQ9BWU0 796 aaKnown RBP14.5□□□□□ -0.09
SEMA6D-213ENST00000559196 FOXD4L1Q9NU39 408 aa14.4□□□□□ -0.1
SEMA6D-213ENST00000559196 POTEHQ6S545 545 aa14.37□□□□□ -0.11
SEMA6D-213ENST00000559196 POLA2Q14181 598 aa14.32□□□□□ -0.12
SEMA6D-213ENST00000559196 ATF5Q9Y2D1 282 aaPredicted RBP14.31□□□□□ -0.12
SEMA6D-213ENST00000559196 ZBTB22O15209 634 aa14.27□□□□□ -0.13
SEMA6D-213ENST00000559196 RBM42Q9BTD8 480 aaKnown RBP14.21□□□□□ -0.13
SEMA6D-213ENST00000559196 ATXN8OSP0DMR3 200 aa14.05□□□□□ -0.16
SEMA6D-213ENST00000559196 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
SEMA6D-213ENST00000559196 NISCHQ9Y2I1 1504 aa14.01□□□□□ -0.17
SEMA6D-213ENST00000559196 CHRDL2Q6WN34 429 aa13.94□□□□□ -0.18
SEMA6D-213ENST00000559196 AKT1S1Q96B36 256 aa13.94□□□□□ -0.18
SEMA6D-213ENST00000559196 OSCARQ8IYS5 282 aa13.86□□□□□ -0.19
SEMA6D-213ENST00000559196 REM2Q8IYK8 340 aaPredicted RBP13.8□□□□□ -0.2
SEMA6D-213ENST00000559196 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
SEMA6D-213ENST00000559196 SPDYE2BA6NHP3 402 aa13.64□□□□□ -0.23
SEMA6D-213ENST00000559196 PITPNM1O00562 1244 aa13.64□□□□□ -0.23
SEMA6D-213ENST00000559196 SPDYE6P0CI01 402 aa13.64□□□□□ -0.23
SEMA6D-213ENST00000559196 SPDYE2Q495Y8 402 aa13.64□□□□□ -0.23
SEMA6D-213ENST00000559196 PIP4P2Q8N4L2 257 aa13.64□□□□□ -0.23
SEMA6D-213ENST00000559196 FXR2P51116 673 aaKnown RBP eCLIP13.61□□□□□ -0.23
SEMA6D-213ENST00000559196 FBLN2P98095 1184 aa13.6□□□□□ -0.23
SEMA6D-213ENST00000559196 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
SEMA6D-213ENST00000559196 SSUH2Q9Y2M2 353 aa13.52□□□□□ -0.25
SEMA6D-213ENST00000559196 SP7Q8TDD2 431 aaPredicted RBP13.45□□□□□ -0.26
SEMA6D-213ENST00000559196 ZNF692Q9BU19 519 aaPredicted RBP13.38□□□□□ -0.27
SEMA6D-213ENST00000559196 SPDYE1Q8NFV5 336 aaPredicted RBP13.35□□□□□ -0.27
SEMA6D-213ENST00000559196 HAX1O00165 279 aa13.28□□□□□ -0.28
SEMA6D-213ENST00000559196 EVX2Q03828 476 aa13.27□□□□□ -0.29
SEMA6D-213ENST00000559196 PRKAR2AP13861 404 aaKnown RBP13.23□□□□□ -0.29
SEMA6D-213ENST00000559196 CLEC11AQ9Y240 323 aa13.23□□□□□ -0.29
SEMA6D-213ENST00000559196 PABPN1Q86U42 306 aaKnown RBP eCLIP13.2□□□□□ -0.3
SEMA6D-213ENST00000559196 C19orf67A6NJJ6 358 aa13.17□□□□□ -0.3
SEMA6D-213ENST00000559196 EHMT2Q96KQ7 1210 aa13.14□□□□□ -0.31
SEMA6D-213ENST00000559196 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
SEMA6D-213ENST00000559196 CHADLQ6NUI6 762 aa13.06□□□□□ -0.32
SEMA6D-213ENST00000559196 GABBR2O75899 941 aa12.93□□□□□ -0.34
SEMA6D-213ENST00000559196 FARP1Q9Y4F1 1045 aaPredicted RBP12.92□□□□□ -0.34
SEMA6D-213ENST00000559196 SPDYE4A6NLX3 237 aa12.88□□□□□ -0.35
SEMA6D-213ENST00000559196 CREBZFQ9NS37 354 aa12.86□□□□□ -0.35
SEMA6D-213ENST00000559196 STAG3Q9UJ98 1225 aa12.85□□□□□ -0.35
SEMA6D-213ENST00000559196 CD44P16070 742 aaKnown RBP12.8□□□□□ -0.36
SEMA6D-213ENST00000559196 PROM2Q8N271 834 aa12.79□□□□□ -0.36
SEMA6D-213ENST00000559196 CLCN6P51797 869 aa12.75□□□□□ -0.37
SEMA6D-213ENST00000559196 POTEIP0CG38 1075 aa12.73□□□□□ -0.37
SEMA6D-213ENST00000559196 MNX1P50219 401 aaPredicted RBP12.71□□□□□ -0.37
SEMA6D-213ENST00000559196 ZNF579Q8NAF0 562 aaKnown RBP12.7□□□□□ -0.38
SEMA6D-213ENST00000559196 LHX8Q68G74 356 aa12.59□□□□□ -0.39
SEMA6D-213ENST00000559196 ZRANB1Q9UGI0 708 aa12.59□□□□□ -0.39
SEMA6D-213ENST00000559196 GALR2O43603 387 aaPredicted RBP12.5□□□□□ -0.41
SEMA6D-213ENST00000559196 NPM1P06748 294 aaKnown RBP eCLIP12.5□□□□□ -0.41
SEMA6D-213ENST00000559196 CCDC180Q9P1Z9 1646 aa12.45□□□□□ -0.42
SEMA6D-213ENST00000559196 PHF12Q96QT6 1004 aa12.45□□□□□ -0.42
SEMA6D-213ENST00000559196 DCBLD2Q96PD2 775 aa12.44□□□□□ -0.42
SEMA6D-213ENST00000559196 PAK3O75914 559 aaPredicted RBP12.41□□□□□ -0.42
SEMA6D-213ENST00000559196 CCDC61Q9Y6R9 512 aa12.35□□□□□ -0.43
SEMA6D-213ENST00000559196 PELP1Q8IZL8 1130 aaKnown RBP12.32□□□□□ -0.44
SEMA6D-213ENST00000559196 ASTLQ6HA08 431 aaPredicted RBP12.31□□□□□ -0.44
SEMA6D-213ENST00000559196 POTEB2H3BUK9 544 aa12.3□□□□□ -0.44
SEMA6D-213ENST00000559196 MS4A3Q96HJ5 214 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms