RNA–Protein interactions for RNA: ENST00000559077.1

RNF111-204, Transcript of ring finger protein 111, humanhuman

TSL 5

Gene RNF111, Length 472 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-204ENST00000559077 SLC4A5Q9BY07 1137 aa14.44□□□□□ -0.1
RNF111-204ENST00000559077 A0A0G2JS52 829 aa14.43□□□□□ -0.1
RNF111-204ENST00000559077 NBPF3Q9H094 633 aa14.43□□□□□ -0.1
RNF111-204ENST00000559077 FOSBP53539 338 aa14.42□□□□□ -0.1
RNF111-204ENST00000559077 ZBED2Q9BTP6 218 aa14.41□□□□□ -0.1
RNF111-204ENST00000559077 IFFO2Q5TF58 517 aa14.4□□□□□ -0.1
RNF111-204ENST00000559077 CCDC88BA6NC98 1476 aa14.39□□□□□ -0.11
RNF111-204ENST00000559077 BHMG1C9JSJ3 638 aaPredicted RBP14.39□□□□□ -0.11
RNF111-204ENST00000559077 ZDHHC16Q969W1 377 aa14.37□□□□□ -0.11
RNF111-204ENST00000559077 JPH4Q96JJ6 628 aa14.36□□□□□ -0.11
RNF111-204ENST00000559077 RYDENQ9NUL5 291 aaKnown RBP14.36□□□□□ -0.11
RNF111-204ENST00000559077 EVI5O60447 810 aa14.35□□□□□ -0.11
RNF111-204ENST00000559077 ADAM33Q9BZ11 813 aa14.35□□□□□ -0.11
RNF111-204ENST00000559077 CRISPLD2Q9H0B8 497 aa14.35□□□□□ -0.11
RNF111-204ENST00000559077 GTPBP6O43824 516 aaPredicted RBP14.32□□□□□ -0.12
RNF111-204ENST00000559077 PDE4AP27815 886 aa14.32□□□□□ -0.12
RNF111-204ENST00000559077 ANKK1Q8NFD2 765 aa14.32□□□□□ -0.12
RNF111-204ENST00000559077 MAP3K9P80192 1104 aa14.3□□□□□ -0.12
RNF111-204ENST00000559077 CFTRP13569 1480 aa14.27□□□□□ -0.12
RNF111-204ENST00000559077 LAMC3Q9Y6N6 1575 aa14.26□□□□□ -0.13
RNF111-204ENST00000559077 CADPSQ9ULU8 1353 aa14.26□□□□□ -0.13
RNF111-204ENST00000559077 Q6ZNB5 142 aa14.26□□□□□ -0.13
RNF111-204ENST00000559077 ANO8Q9HCE9 1232 aaPredicted RBP14.26□□□□□ -0.13
RNF111-204ENST00000559077 LARP6Q9BRS8 491 aaKnown RBP14.25□□□□□ -0.13
RNF111-204ENST00000559077 NCKAP5LQ9HCH0 1330 aa14.24□□□□□ -0.13
RNF111-204ENST00000559077 BCAMP50895 628 aa14.24□□□□□ -0.13
RNF111-204ENST00000559077 PROX2Q3B8N5 592 aa14.24□□□□□ -0.13
RNF111-204ENST00000559077 PPP1R3GB7ZBB8 358 aa14.23□□□□□ -0.13
RNF111-204ENST00000559077 RTN4Q9NQC3 1192 aaKnown RBP14.23□□□□□ -0.13
RNF111-204ENST00000559077 DDX27Q96GQ7 796 aaKnown RBP14.22□□□□□ -0.13
RNF111-204ENST00000559077 RABGEF1Q9UJ41 708 aa14.22□□□□□ -0.13
RNF111-204ENST00000559077 PRDM2Q13029 1718 aa14.21□□□□□ -0.13
RNF111-204ENST00000559077 AMER1Q5JTC6 1135 aaPredicted RBP14.17□□□□□ -0.14
RNF111-204ENST00000559077 PDS5BQ9NTI5 1447 aa14.16□□□□□ -0.14
RNF111-204ENST00000559077 ITGBL1O95965 494 aaPredicted RBP14.16□□□□□ -0.14
RNF111-204ENST00000559077 COL9A1P20849 921 aa14.16□□□□□ -0.14
RNF111-204ENST00000559077 PCDHGA10Q9Y5H3 936 aa14.15□□□□□ -0.14
RNF111-204ENST00000559077 SOWAHBA6NEL2 793 aa14.13□□□□□ -0.15
RNF111-204ENST00000559077 KCNC4Q03721 635 aa14.13□□□□□ -0.15
RNF111-204ENST00000559077 KIAA1468Q9P260 1216 aa14.13□□□□□ -0.15
RNF111-204ENST00000559077 TYW1BQ6NUM6 668 aa14.12□□□□□ -0.15
RNF111-204ENST00000559077 ZFRQ96KR1 1074 aaKnown RBP14.12□□□□□ -0.15
RNF111-204ENST00000559077 LAPTM4BQ86VI4 370 aa14.11□□□□□ -0.15
RNF111-204ENST00000559077 FBXW7Q969H0 707 aa14.11□□□□□ -0.15
RNF111-204ENST00000559077 WBP1LQ9NX94 342 aa14.11□□□□□ -0.15
RNF111-204ENST00000559077 SEPT9Q9UHD8 586 aaPredicted RBP14.11□□□□□ -0.15
RNF111-204ENST00000559077 CADPS2Q86UW7 1296 aa14.1□□□□□ -0.15
RNF111-204ENST00000559077 NYAP1Q6ZVC0 841 aa14.09□□□□□ -0.15
RNF111-204ENST00000559077 EMILIN3Q9NT22 766 aa14.09□□□□□ -0.15
RNF111-204ENST00000559077 FANCD2Q9BXW9 1451 aa14.07□□□□□ -0.16
RNF111-204ENST00000559077 PHF14O94880 888 aa14.06□□□□□ -0.16
RNF111-204ENST00000559077 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
RNF111-204ENST00000559077 ABCC8Q09428 1581 aa14.05□□□□□ -0.16
RNF111-204ENST00000559077 BBXQ8WY36 941 aaPredicted RBP14.05□□□□□ -0.16
RNF111-204ENST00000559077 NESP48681 1621 aa14.04□□□□□ -0.16
RNF111-204ENST00000559077 HPS5Q9UPZ3 1129 aa14.03□□□□□ -0.16
RNF111-204ENST00000559077 MFSD10Q14728 455 aa14.02□□□□□ -0.17
RNF111-204ENST00000559077 RBM33Q96EV2 1170 aaKnown RBP14.02□□□□□ -0.17
RNF111-204ENST00000559077 LRCH3Q96II8 777 aa14.02□□□□□ -0.17
RNF111-204ENST00000559077 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.02□□□□□ -0.17
RNF111-204ENST00000559077 WRNQ14191 1432 aaPredicted RBP eCLIP14.01□□□□□ -0.17
RNF111-204ENST00000559077 C6orf132Q5T0Z8 1188 aa14□□□□□ -0.17
RNF111-204ENST00000559077 TSR3Q9UJK0 312 aaKnown RBP13.99□□□□□ -0.17
RNF111-204ENST00000559077 FAM98CQ17RN3 349 aaKnown RBP13.98□□□□□ -0.17
RNF111-204ENST00000559077 ERCC6Q03468 1493 aa13.98□□□□□ -0.17
RNF111-204ENST00000559077 LAPTM4AQ15012 233 aa13.97□□□□□ -0.17
RNF111-204ENST00000559077 EPAS1Q99814 870 aa13.97□□□□□ -0.17
RNF111-204ENST00000559077 TRIM6-TRIM34B2RNG4 842 aa13.96□□□□□ -0.17
RNF111-204ENST00000559077 GFRA3O60609 400 aa13.96□□□□□ -0.17
RNF111-204ENST00000559077 TOP2BQ02880 1626 aa13.95□□□□□ -0.18
RNF111-204ENST00000559077 ONECUT3O60422 494 aaPredicted RBP13.95□□□□□ -0.18
RNF111-204ENST00000559077 DNMBPQ6XZF7 1577 aa13.95□□□□□ -0.18
RNF111-204ENST00000559077 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
RNF111-204ENST00000559077 MRC2Q9UBG0 1479 aa13.94□□□□□ -0.18
RNF111-204ENST00000559077 BIVM-ERCC5R4GMW8 1640 aa13.94□□□□□ -0.18
RNF111-204ENST00000559077 DPYSL4O14531 572 aa13.91□□□□□ -0.18
RNF111-204ENST00000559077 TRAF7Q6Q0C0 670 aa13.91□□□□□ -0.18
RNF111-204ENST00000559077 DDX12PQ92771 950 aa13.91□□□□□ -0.18
RNF111-204ENST00000559077 PPP4CP60510 307 aa13.9□□□□□ -0.18
RNF111-204ENST00000559077 CUX1P39880 1505 aa13.9□□□□□ -0.19
RNF111-204ENST00000559077 WDR62O43379 1518 aa13.89□□□□□ -0.19
RNF111-204ENST00000559077 TOPBP1Q92547 1522 aa13.89□□□□□ -0.19
RNF111-204ENST00000559077 SYNJ1O43426 1573 aa13.88□□□□□ -0.19
RNF111-204ENST00000559077 PACS2Q86VP3 889 aa13.88□□□□□ -0.19
RNF111-204ENST00000559077 SPRYD3Q8NCJ5 442 aa13.87□□□□□ -0.19
RNF111-204ENST00000559077 URB2Q14146 1524 aaKnown RBP13.86□□□□□ -0.19
RNF111-204ENST00000559077 PRKD2Q9BZL6 878 aa13.86□□□□□ -0.19
RNF111-204ENST00000559077 MAP3K7O43318 606 aa13.85□□□□□ -0.19
RNF111-204ENST00000559077 THOC2Q8NI27 1593 aaKnown RBP13.84□□□□□ -0.19
RNF111-204ENST00000559077 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.84□□□□□ -0.19
RNF111-204ENST00000559077 NBR1Q14596 966 aa13.83□□□□□ -0.2
RNF111-204ENST00000559077 EEA1Q15075 1411 aa13.82□□□□□ -0.2
RNF111-204ENST00000559077 PAXIP1Q6ZW49 1069 aaPredicted RBP13.82□□□□□ -0.2
RNF111-204ENST00000559077 FGD5Q6ZNL6 1462 aa13.8□□□□□ -0.2
RNF111-204ENST00000559077 RNF40O75150 1001 aa13.8□□□□□ -0.2
RNF111-204ENST00000559077 CAMK2BQ13554 666 aa13.8□□□□□ -0.2
RNF111-204ENST00000559077 CFAP44Q96MT7 982 aa13.8□□□□□ -0.2
RNF111-204ENST00000559077 WDR97A6NE52 1622 aa13.79□□□□□ -0.2
RNF111-204ENST00000559077 SMAPO00193 183 aa13.79□□□□□ -0.2
RNF111-204ENST00000559077 TSR1Q2NL82 804 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms