RNA–Protein interactions for RNA: ENST00000558548.5

MRPS11-205, Transcript of mitochondrial ribosomal protein S11, humanhuman

TSL 3

Gene MRPS11, Length 745 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-205ENST00000558548 ARHGAP35Q9NRY4 1499 aa13.71□□□□□ -0.21
MRPS11-205ENST00000558548 FHAD1B1AJZ9 1412 aa13.71□□□□□ -0.22
MRPS11-205ENST00000558548 CTTNBP2Q8WZ74 1663 aa13.69□□□□□ -0.22
MRPS11-205ENST00000558548 TARBP1Q13395 1621 aaKnown RBP13.68□□□□□ -0.22
MRPS11-205ENST00000558548 KDM4FA0A1W2PPD8 638 aa13.66□□□□□ -0.22
MRPS11-205ENST00000558548 CLASP1Q7Z460 1538 aa13.64□□□□□ -0.23
MRPS11-205ENST00000558548 RRBP1Q9P2E9 1410 aaKnown RBP13.64□□□□□ -0.23
MRPS11-205ENST00000558548 C2orf72A6NCS6 295 aa13.63□□□□□ -0.23
MRPS11-205ENST00000558548 TMC2Q8TDI7 906 aa13.63□□□□□ -0.23
MRPS11-205ENST00000558548 CLSPNQ9HAW4 1339 aa13.63□□□□□ -0.23
MRPS11-205ENST00000558548 CFAP43Q8NDM7 1665 aa13.63□□□□□ -0.23
MRPS11-205ENST00000558548 GAPVD1Q14C86 1478 aa13.61□□□□□ -0.23
MRPS11-205ENST00000558548 RAD54L2Q9Y4B4 1467 aa13.61□□□□□ -0.23
MRPS11-205ENST00000558548 FYCO1Q9BQS8 1478 aa13.61□□□□□ -0.23
MRPS11-205ENST00000558548 TDRD9Q8NDG6 1382 aaKnown RBP13.6□□□□□ -0.23
MRPS11-205ENST00000558548 SNPHO15079 494 aa13.6□□□□□ -0.23
MRPS11-205ENST00000558548 TIAM1Q13009 1591 aa13.6□□□□□ -0.23
MRPS11-205ENST00000558548 SAMD9Q5K651 1589 aa13.6□□□□□ -0.23
MRPS11-205ENST00000558548 KIF3CO14782 793 aa13.59□□□□□ -0.23
MRPS11-205ENST00000558548 CHMP7Q8WUX9 453 aaPredicted RBP13.59□□□□□ -0.23
MRPS11-205ENST00000558548 FMN1Q68DA7 1419 aa13.57□□□□□ -0.24
MRPS11-205ENST00000558548 SNAPC4Q5SXM2 1469 aa13.57□□□□□ -0.24
MRPS11-205ENST00000558548 CADPS2Q86UW7 1296 aa13.57□□□□□ -0.24
MRPS11-205ENST00000558548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.57□□□□□ -0.24
MRPS11-205ENST00000558548 MARVELD3Q96A59 401 aa13.56□□□□□ -0.24
MRPS11-205ENST00000558548 CASKIN1Q8WXD9 1431 aa13.56□□□□□ -0.24
MRPS11-205ENST00000558548 GPHNQ9NQX3 736 aaPredicted RBP13.55□□□□□ -0.24
MRPS11-205ENST00000558548 PBRM1Q86U86 1689 aa13.55□□□□□ -0.24
MRPS11-205ENST00000558548 PDE4AP27815 886 aa13.53□□□□□ -0.24
MRPS11-205ENST00000558548 CRISPLD2Q9H0B8 497 aa13.53□□□□□ -0.24
MRPS11-205ENST00000558548 NCKAP5LQ9HCH0 1330 aa13.53□□□□□ -0.24
MRPS11-205ENST00000558548 PLCB2Q00722 1185 aa13.52□□□□□ -0.25
MRPS11-205ENST00000558548 ADAMTS12P58397 1594 aa13.52□□□□□ -0.25
MRPS11-205ENST00000558548 ERCC6L2Q5T890 1561 aa13.51□□□□□ -0.25
MRPS11-205ENST00000558548 LRRC9Q6ZRR7 1453 aa13.51□□□□□ -0.25
MRPS11-205ENST00000558548 GRIN2BQ13224 1484 aa13.5□□□□□ -0.25
MRPS11-205ENST00000558548 HOXB3P14651 431 aaPredicted RBP13.5□□□□□ -0.25
MRPS11-205ENST00000558548 DSG2Q14126 1118 aa13.5□□□□□ -0.25
MRPS11-205ENST00000558548 LARP6Q9BRS8 491 aaKnown RBP13.5□□□□□ -0.25
MRPS11-205ENST00000558548 FOXK1P85037 733 aa13.49□□□□□ -0.25
MRPS11-205ENST00000558548 DOK7Q18PE1 504 aa13.49□□□□□ -0.25
MRPS11-205ENST00000558548 PCF11O94913 1555 aaKnown RBP13.49□□□□□ -0.25
MRPS11-205ENST00000558548 KIF13AQ9H1H9 1805 aa13.48□□□□□ -0.25
MRPS11-205ENST00000558548 PLPP6Q8IY26 295 aa13.48□□□□□ -0.25
MRPS11-205ENST00000558548 TSHZ2Q9NRE2 1034 aa13.48□□□□□ -0.25
MRPS11-205ENST00000558548 MAGI1Q96QZ7 1491 aaPredicted RBP13.47□□□□□ -0.25
MRPS11-205ENST00000558548 CCNB3Q8WWL7 1395 aa13.46□□□□□ -0.25
MRPS11-205ENST00000558548 ZNF710Q8N1W2 664 aa13.46□□□□□ -0.25
MRPS11-205ENST00000558548 CCER1Q8TC90 406 aaPredicted RBP13.46□□□□□ -0.25
MRPS11-205ENST00000558548 UGGT2Q9NYU1 1516 aa13.45□□□□□ -0.26
MRPS11-205ENST00000558548 SYNJ2O15056 1496 aa13.44□□□□□ -0.26
MRPS11-205ENST00000558548 CCDC18Q5T9S5 1454 aa13.44□□□□□ -0.26
MRPS11-205ENST00000558548 IQGAP2Q13576 1575 aa13.44□□□□□ -0.26
MRPS11-205ENST00000558548 PPP1R15BQ5SWA1 713 aa13.43□□□□□ -0.26
MRPS11-205ENST00000558548 DDX27Q96GQ7 796 aaKnown RBP13.43□□□□□ -0.26
MRPS11-205ENST00000558548 RIMBP2O15034 1052 aa13.42□□□□□ -0.26
MRPS11-205ENST00000558548 EMP3P54852 163 aa13.42□□□□□ -0.26
MRPS11-205ENST00000558548 FAM69CQ0P6D2 419 aa13.42□□□□□ -0.26
MRPS11-205ENST00000558548 PPARGC1BQ86YN6 1023 aaKnown RBP13.4□□□□□ -0.26
MRPS11-205ENST00000558548 EHBP1L1Q8N3D4 1523 aa13.39□□□□□ -0.27
MRPS11-205ENST00000558548 MFSD10Q14728 455 aa13.39□□□□□ -0.27
MRPS11-205ENST00000558548 HECW1Q76N89 1606 aa13.39□□□□□ -0.27
MRPS11-205ENST00000558548 SPNS2Q8IVW8 549 aa13.38□□□□□ -0.27
MRPS11-205ENST00000558548 KIAA0586Q9BVV6 1533 aa13.38□□□□□ -0.27
MRPS11-205ENST00000558548 ACIN1Q9UKV3 1341 aaKnown RBP13.38□□□□□ -0.27
MRPS11-205ENST00000558548 HAP1P54257 671 aaPredicted RBP13.37□□□□□ -0.27
MRPS11-205ENST00000558548 MMRN1Q13201 1228 aa13.36□□□□□ -0.27
MRPS11-205ENST00000558548 KANK4Q5T7N3 995 aaPredicted RBP13.36□□□□□ -0.27
MRPS11-205ENST00000558548 FAM205CA6NFA0 338 aa13.35□□□□□ -0.27
MRPS11-205ENST00000558548 SLC34A2O95436 690 aa13.35□□□□□ -0.27
MRPS11-205ENST00000558548 ARSIQ5FYB1 569 aa13.35□□□□□ -0.27
MRPS11-205ENST00000558548 HS3ST6Q96QI5 342 aa13.35□□□□□ -0.27
MRPS11-205ENST00000558548 ZSWIM6Q9HCJ5 1215 aa13.35□□□□□ -0.27
MRPS11-205ENST00000558548 FHOD3Q2V2M9 1422 aa13.35□□□□□ -0.27
MRPS11-205ENST00000558548 HECW2Q9P2P5 1572 aa13.35□□□□□ -0.27
MRPS11-205ENST00000558548 SUPT6HQ7KZ85 1726 aaKnown RBP13.34□□□□□ -0.27
MRPS11-205ENST00000558548 POTEB3A0JP26 581 aa13.34□□□□□ -0.27
MRPS11-205ENST00000558548 HOXB1P14653 301 aaPredicted RBP13.34□□□□□ -0.27
MRPS11-205ENST00000558548 GPR153Q6NV75 609 aa13.34□□□□□ -0.27
MRPS11-205ENST00000558548 POTEBQ6S5H4 581 aa13.34□□□□□ -0.27
MRPS11-205ENST00000558548 FBXO41Q8TF61 875 aa13.34□□□□□ -0.27
MRPS11-205ENST00000558548 WDR70Q9NW82 654 aa13.34□□□□□ -0.27
MRPS11-205ENST00000558548 KDM6BO15054 1643 aa13.33□□□□□ -0.28
MRPS11-205ENST00000558548 GRIN2AQ12879 1464 aa13.32□□□□□ -0.28
MRPS11-205ENST00000558548 UPF1Q92900 1129 aaKnown RBP eCLIP13.32□□□□□ -0.28
MRPS11-205ENST00000558548 KHSRPQ92945 711 aaKnown RBP eCLIP13.32□□□□□ -0.28
MRPS11-205ENST00000558548 PCDHGA4Q9Y5G9 962 aa13.32□□□□□ -0.28
MRPS11-205ENST00000558548 CEP170Q5SW79 1584 aa13.32□□□□□ -0.28
MRPS11-205ENST00000558548 AKNAQ7Z591 1439 aa13.3□□□□□ -0.28
MRPS11-205ENST00000558548 ABCC10Q5T3U5 1492 aa13.3□□□□□ -0.28
MRPS11-205ENST00000558548 PTCD2Q8WV60 388 aaKnown RBP13.3□□□□□ -0.28
MRPS11-205ENST00000558548 DHX57Q6P158 1386 aaKnown RBP13.3□□□□□ -0.28
MRPS11-205ENST00000558548 ADGRL1O94910 1474 aa13.29□□□□□ -0.28
MRPS11-205ENST00000558548 LRRIQ1Q96JM4 1722 aa13.29□□□□□ -0.28
MRPS11-205ENST00000558548 KIAA0556O60303 1618 aa13.28□□□□□ -0.28
MRPS11-205ENST00000558548 PHLDB1Q86UU1 1377 aa13.28□□□□□ -0.28
MRPS11-205ENST00000558548 NUP160Q12769 1436 aa13.28□□□□□ -0.28
MRPS11-205ENST00000558548 FGD6Q6ZV73 1430 aa13.28□□□□□ -0.28
MRPS11-205ENST00000558548 TBC1D12O60347 775 aa13.27□□□□□ -0.29
MRPS11-205ENST00000558548 KRTAP3-3Q9BYR6 98 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms