RNA–Protein interactions for RNA: ENST00000558548.5

MRPS11-205, Transcript of mitochondrial ribosomal protein S11, humanhuman

TSL 3

Gene MRPS11, Length 745 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-205ENST00000558548 AEBP2Q6ZN18 517 aaPredicted RBP29.91■■■□□ 2.38
MRPS11-205ENST00000558548 CHIC1Q5VXU3 224 aa28.7■■■□□ 2.18
MRPS11-205ENST00000558548 SENP3Q9H4L4 574 aaPredicted RBP25.49■■□□□ 1.67
MRPS11-205ENST00000558548 PHF23Q9BUL5 403 aaPredicted RBP25.24■■□□□ 1.63
MRPS11-205ENST00000558548 FOXD1Q16676 465 aa23.81■■□□□ 1.4
MRPS11-205ENST00000558548 PLPPR3Q6T4P5 718 aa23.24■■□□□ 1.31
MRPS11-205ENST00000558548 PPP6R1Q9UPN7 881 aa22.35■■□□□ 1.17
MRPS11-205ENST00000558548 ADRA2BP18089 450 aa22.33■■□□□ 1.17
MRPS11-205ENST00000558548 MSH5O43196 834 aa22.3■■□□□ 1.16
MRPS11-205ENST00000558548 PIAS4Q8N2W9 510 aaPredicted RBP22.23■■□□□ 1.15
MRPS11-205ENST00000558548 POTEDQ86YR6 584 aa22.04■■□□□ 1.12
MRPS11-205ENST00000558548 PPP4R3CPQ6ZMV5 832 aa20.48■□□□□ 0.87
MRPS11-205ENST00000558548 SCAF1Q9H7N4 1312 aaKnown RBP20.4■□□□□ 0.86
MRPS11-205ENST00000558548 MAPK8IP2Q13387 824 aaPredicted RBP20.34■□□□□ 0.85
MRPS11-205ENST00000558548 DMRT2Q9Y5R5 561 aa20.2■□□□□ 0.82
MRPS11-205ENST00000558548 CNKSR2Q8WXI2 1034 aa19.92■□□□□ 0.78
MRPS11-205ENST00000558548 NCBP3Q53F19 620 aaKnown RBP19.88■□□□□ 0.77
MRPS11-205ENST00000558548 KCNA4P22459 653 aa19.83■□□□□ 0.77
MRPS11-205ENST00000558548 NISCHQ9Y2I1 1504 aa19.66■□□□□ 0.74
MRPS11-205ENST00000558548 NPM3O75607 178 aaKnown RBP19.59■□□□□ 0.73
MRPS11-205ENST00000558548 RNF216Q9NWF9 866 aaPredicted RBP19.55■□□□□ 0.72
MRPS11-205ENST00000558548 HOXD11P31277 338 aaPredicted RBP19.51■□□□□ 0.71
MRPS11-205ENST00000558548 DCAF8L1A6NGE4 600 aa19.44■□□□□ 0.7
MRPS11-205ENST00000558548 CACNB1Q02641 598 aaPredicted RBP19.25■□□□□ 0.67
MRPS11-205ENST00000558548 RNF39Q9H2S5 420 aa19.03■□□□□ 0.64
MRPS11-205ENST00000558548 DNAJC5BQ9UF47 199 aa18.94■□□□□ 0.62
MRPS11-205ENST00000558548 SLC4A1APQ9BWU0 796 aaKnown RBP18.85■□□□□ 0.61
MRPS11-205ENST00000558548 C1QBPQ07021 282 aaKnown RBP18.72■□□□□ 0.59
MRPS11-205ENST00000558548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.66■□□□□ 0.58
MRPS11-205ENST00000558548 SLC4A2P04920 1241 aa18.54■□□□□ 0.56
MRPS11-205ENST00000558548 U3KPZ7 1027 aaPredicted RBP18.3■□□□□ 0.52
MRPS11-205ENST00000558548 FOXD4L1Q9NU39 408 aa18.27■□□□□ 0.52
MRPS11-205ENST00000558548 ZBTB22O15209 634 aa18.23■□□□□ 0.51
MRPS11-205ENST00000558548 EHMT2Q96KQ7 1210 aa18.16■□□□□ 0.5
MRPS11-205ENST00000558548 MYCNP04198 464 aaPredicted RBP18.09■□□□□ 0.49
MRPS11-205ENST00000558548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18■□□□□ 0.47
MRPS11-205ENST00000558548 HNRNPUL2Q1KMD3 747 aaKnown RBP18■□□□□ 0.47
MRPS11-205ENST00000558548 CSRNP3Q8WYN3 585 aa18■□□□□ 0.47
MRPS11-205ENST00000558548 SAMD1Q6SPF0 538 aaPredicted RBP17.93■□□□□ 0.46
MRPS11-205ENST00000558548 SPINK5Q9NQ38 1064 aaPredicted RBP17.91■□□□□ 0.46
MRPS11-205ENST00000558548 CAPN15O75808 1086 aa17.88■□□□□ 0.45
MRPS11-205ENST00000558548 APLP2Q06481 763 aa17.84■□□□□ 0.45
MRPS11-205ENST00000558548 DSG3P32926 999 aa17.79■□□□□ 0.44
MRPS11-205ENST00000558548 TRHP20396 242 aaPredicted RBP17.71■□□□□ 0.43
MRPS11-205ENST00000558548 ATF5Q9Y2D1 282 aaPredicted RBP17.66■□□□□ 0.42
MRPS11-205ENST00000558548 ZNF219Q9P2Y4 722 aaPredicted RBP17.63■□□□□ 0.41
MRPS11-205ENST00000558548 ATXN8OSP0DMR3 200 aa17.61■□□□□ 0.41
MRPS11-205ENST00000558548 ABCB7O75027 752 aa17.48■□□□□ 0.39
MRPS11-205ENST00000558548 ABCC9O60706 1549 aa17.47■□□□□ 0.39
MRPS11-205ENST00000558548 POLA2Q14181 598 aa17.37■□□□□ 0.37
MRPS11-205ENST00000558548 POTEHQ6S545 545 aa17.24■□□□□ 0.35
MRPS11-205ENST00000558548 CCDC180Q9P1Z9 1646 aa17.18■□□□□ 0.34
MRPS11-205ENST00000558548 ZBTB12Q9Y330 459 aaPredicted RBP17■□□□□ 0.31
MRPS11-205ENST00000558548 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
MRPS11-205ENST00000558548 FBLN2P98095 1184 aa16.91■□□□□ 0.3
MRPS11-205ENST00000558548 MKRN4PQ13434 485 aaPredicted RBP16.86■□□□□ 0.29
MRPS11-205ENST00000558548 OSCARQ8IYS5 282 aa16.77■□□□□ 0.28
MRPS11-205ENST00000558548 CHRDL2Q6WN34 429 aa16.65■□□□□ 0.26
MRPS11-205ENST00000558548 ZCCHC6Q5VYS8 1495 aaKnown RBP16.63■□□□□ 0.25
MRPS11-205ENST00000558548 SPDYE2BA6NHP3 402 aa16.55■□□□□ 0.24
MRPS11-205ENST00000558548 SPDYE6P0CI01 402 aa16.55■□□□□ 0.24
MRPS11-205ENST00000558548 SPDYE2Q495Y8 402 aa16.55■□□□□ 0.24
MRPS11-205ENST00000558548 AKT1S1Q96B36 256 aa16.53■□□□□ 0.24
MRPS11-205ENST00000558548 DCAF1Q9Y4B6 1507 aa16.52■□□□□ 0.24
MRPS11-205ENST00000558548 ZNF692Q9BU19 519 aaPredicted RBP16.51■□□□□ 0.23
MRPS11-205ENST00000558548 SPDYE4A6NLX3 237 aa16.42■□□□□ 0.22
MRPS11-205ENST00000558548 REM2Q8IYK8 340 aaPredicted RBP16.4■□□□□ 0.22
MRPS11-205ENST00000558548 SSUH2Q9Y2M2 353 aa16.39■□□□□ 0.21
MRPS11-205ENST00000558548 FKBP8Q14318 412 aa16.3■□□□□ 0.2
MRPS11-205ENST00000558548 PABPN1Q86U42 306 aaKnown RBP eCLIP16.28■□□□□ 0.2
MRPS11-205ENST00000558548 MYO15BQ96JP2 1530 aa16.27■□□□□ 0.2
MRPS11-205ENST00000558548 PITPNM1O00562 1244 aa16.24■□□□□ 0.19
MRPS11-205ENST00000558548 PIP4P2Q8N4L2 257 aa16.24■□□□□ 0.19
MRPS11-205ENST00000558548 DNAJC5Q9H3Z4 198 aa16.19■□□□□ 0.18
MRPS11-205ENST00000558548 SPDYE1Q8NFV5 336 aaPredicted RBP16.11■□□□□ 0.17
MRPS11-205ENST00000558548 CLEC11AQ9Y240 323 aa16.11■□□□□ 0.17
MRPS11-205ENST00000558548 RB1CC1Q8TDY2 1594 aa16.11■□□□□ 0.17
MRPS11-205ENST00000558548 FXR2P51116 673 aaKnown RBP eCLIP16.1■□□□□ 0.17
MRPS11-205ENST00000558548 SP7Q8TDD2 431 aaPredicted RBP16.1■□□□□ 0.17
MRPS11-205ENST00000558548 PROM2Q8N271 834 aa16.06■□□□□ 0.16
MRPS11-205ENST00000558548 HAX1O00165 279 aa15.99■□□□□ 0.15
MRPS11-205ENST00000558548 STAG3Q9UJ98 1225 aa15.95■□□□□ 0.14
MRPS11-205ENST00000558548 PRR29P0C7W0 189 aa15.92■□□□□ 0.14
MRPS11-205ENST00000558548 NACADO15069 1562 aa15.88■□□□□ 0.13
MRPS11-205ENST00000558548 DCAF8L2P0C7V8 631 aa15.85■□□□□ 0.13
MRPS11-205ENST00000558548 PRKAR2AP13861 404 aaKnown RBP15.83■□□□□ 0.12
MRPS11-205ENST00000558548 EVX2Q03828 476 aa15.8■□□□□ 0.12
MRPS11-205ENST00000558548 UNC13AQ9UPW8 1703 aa15.8■□□□□ 0.12
MRPS11-205ENST00000558548 BICRAQ9NZM4 1560 aa15.76■□□□□ 0.11
MRPS11-205ENST00000558548 CECR2Q9BXF3 1484 aa15.74■□□□□ 0.11
MRPS11-205ENST00000558548 SHROOM4Q9ULL8 1493 aa15.74■□□□□ 0.11
MRPS11-205ENST00000558548 CHADLQ6NUI6 762 aa15.73■□□□□ 0.11
MRPS11-205ENST00000558548 FBXO3Q9UK99 471 aa15.73■□□□□ 0.11
MRPS11-205ENST00000558548 CC2D2AQ9P2K1 1620 aa15.65■□□□□ 0.1
MRPS11-205ENST00000558548 CREBZFQ9NS37 354 aa15.65■□□□□ 0.1
MRPS11-205ENST00000558548 MIER1Q8N108 512 aa15.63■□□□□ 0.09
MRPS11-205ENST00000558548 C19orf67A6NJJ6 358 aa15.59■□□□□ 0.09
MRPS11-205ENST00000558548 PLCD3Q8N3E9 789 aa15.57■□□□□ 0.08
MRPS11-205ENST00000558548 PLEKHG5O94827 1062 aa15.53■□□□□ 0.08
MRPS11-205ENST00000558548 FARP1Q9Y4F1 1045 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms