RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 KDM6BO15054 1643 aa11.64□□□□□ -0.55
SPG11-209ENST00000558253 SHROOM2Q13796 1616 aa11.64□□□□□ -0.55
SPG11-209ENST00000558253 KIAA1107Q9UPP5 1409 aa11.63□□□□□ -0.55
SPG11-209ENST00000558253 PLEKHH2Q8IVE3 1493 aa11.63□□□□□ -0.55
SPG11-209ENST00000558253 ANKRD50Q9ULJ7 1429 aa11.62□□□□□ -0.55
SPG11-209ENST00000558253 L3MBTL2Q969R5 705 aa11.62□□□□□ -0.55
SPG11-209ENST00000558253 C9orf84Q5VXU9 1444 aa11.61□□□□□ -0.55
SPG11-209ENST00000558253 PZPP20742 1482 aa11.61□□□□□ -0.55
SPG11-209ENST00000558253 KDM5DQ9BY66 1539 aa11.6□□□□□ -0.55
SPG11-209ENST00000558253 C19orf67A6NJJ6 358 aa11.6□□□□□ -0.55
SPG11-209ENST00000558253 CREBZFQ9NS37 354 aa11.6□□□□□ -0.55
SPG11-209ENST00000558253 ZNF777Q9ULD5 760 aaPredicted RBP11.6□□□□□ -0.55
SPG11-209ENST00000558253 ARID4BQ4LE39 1312 aaPredicted RBP11.6□□□□□ -0.55
SPG11-209ENST00000558253 UHRF1BP1LA0JNW5 1464 aa11.59□□□□□ -0.55
SPG11-209ENST00000558253 CDC42BPAQ5VT25 1732 aa11.59□□□□□ -0.55
SPG11-209ENST00000558253 TEX14Q8IWB6 1497 aa11.58□□□□□ -0.56
SPG11-209ENST00000558253 HSPA5P11021 654 aaKnown RBP11.58□□□□□ -0.56
SPG11-209ENST00000558253 CCDC141Q6ZP82 1450 aa11.57□□□□□ -0.56
SPG11-209ENST00000558253 MBD5Q9P267 1494 aa11.57□□□□□ -0.56
SPG11-209ENST00000558253 ABCC2Q92887 1545 aa11.57□□□□□ -0.56
SPG11-209ENST00000558253 MAST1Q9Y2H9 1570 aa11.56□□□□□ -0.56
SPG11-209ENST00000558253 ARHGEF12Q9NZN5 1544 aa11.55□□□□□ -0.56
SPG11-209ENST00000558253 KIF15Q9NS87 1388 aa11.55□□□□□ -0.56
SPG11-209ENST00000558253 UHRF1BP1Q6BDS2 1440 aa11.55□□□□□ -0.56
SPG11-209ENST00000558253 PKD2Q13563 968 aa11.55□□□□□ -0.56
SPG11-209ENST00000558253 PREX2Q70Z35 1606 aa11.55□□□□□ -0.56
SPG11-209ENST00000558253 CHD1O14646 1710 aa11.55□□□□□ -0.56
SPG11-209ENST00000558253 NUP155O75694 1391 aa11.54□□□□□ -0.56
SPG11-209ENST00000558253 SPATA31E1Q6ZUB1 1445 aa11.53□□□□□ -0.56
SPG11-209ENST00000558253 WASHC2AQ641Q2 1341 aa11.53□□□□□ -0.56
SPG11-209ENST00000558253 CNTLNQ9NXG0 1405 aa11.52□□□□□ -0.56
SPG11-209ENST00000558253 CCDC7Q96M83 1385 aa11.52□□□□□ -0.57
SPG11-209ENST00000558253 CLASP1Q7Z460 1538 aa11.51□□□□□ -0.57
SPG11-209ENST00000558253 HIRIP3Q9BW71 556 aaPredicted RBP11.51□□□□□ -0.57
SPG11-209ENST00000558253 ARAP3Q8WWN8 1544 aa11.5□□□□□ -0.57
SPG11-209ENST00000558253 VASPP50552 380 aaPredicted RBP11.5□□□□□ -0.57
SPG11-209ENST00000558253 HNRNPMP52272 730 aaKnown RBP eCLIP11.5□□□□□ -0.57
SPG11-209ENST00000558253 NBPF8Q3BBV2 869 aa11.5□□□□□ -0.57
SPG11-209ENST00000558253 EFCAB2Q5VUJ9 269 aa11.5□□□□□ -0.57
SPG11-209ENST00000558253 FARP1Q9Y4F1 1045 aaPredicted RBP11.5□□□□□ -0.57
SPG11-209ENST00000558253 ROCK2O75116 1388 aaKnown RBP11.5□□□□□ -0.57
SPG11-209ENST00000558253 PLCH2O75038 1416 aa11.5□□□□□ -0.57
SPG11-209ENST00000558253 SAMD9LQ8IVG5 1584 aa11.5□□□□□ -0.57
SPG11-209ENST00000558253 MNX1P50219 401 aaPredicted RBP11.49□□□□□ -0.57
SPG11-209ENST00000558253 PLCD3Q8N3E9 789 aa11.49□□□□□ -0.57
SPG11-209ENST00000558253 ARHGAP5Q13017 1502 aa11.49□□□□□ -0.57
SPG11-209ENST00000558253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.49□□□□□ -0.57
SPG11-209ENST00000558253 PLXNC1O60486 1568 aa11.49□□□□□ -0.57
SPG11-209ENST00000558253 PLEKHG5O94827 1062 aa11.48□□□□□ -0.57
SPG11-209ENST00000558253 CDC42BPBQ9Y5S2 1711 aa11.48□□□□□ -0.57
SPG11-209ENST00000558253 RALGAPBQ86X10 1494 aa11.47□□□□□ -0.57
SPG11-209ENST00000558253 ERBINQ96RT1 1412 aa11.47□□□□□ -0.57
SPG11-209ENST00000558253 STAC3Q96MF2 364 aa11.47□□□□□ -0.57
SPG11-209ENST00000558253 DUOX2Q9NRD8 1548 aa11.46□□□□□ -0.57
SPG11-209ENST00000558253 RTEL1-TNFRSF6BF6WH68 1400 aa11.46□□□□□ -0.57
SPG11-209ENST00000558253 GABBR2O75899 941 aa11.46□□□□□ -0.57
SPG11-209ENST00000558253 SUPT16HQ9Y5B9 1047 aaKnown RBP11.46□□□□□ -0.57
SPG11-209ENST00000558253 MYO5CQ9NQX4 1742 aa11.46□□□□□ -0.58
SPG11-209ENST00000558253 ATP10AO60312 1499 aa11.45□□□□□ -0.58
SPG11-209ENST00000558253 NEFLP07196 543 aa11.45□□□□□ -0.58
SPG11-209ENST00000558253 KCNH8Q96L42 1107 aa11.45□□□□□ -0.58
SPG11-209ENST00000558253 UNC13BO14795 1591 aa11.45□□□□□ -0.58
SPG11-209ENST00000558253 FAM135AQ9P2D6 1515 aa11.45□□□□□ -0.58
SPG11-209ENST00000558253 KTN1Q86UP2 1357 aaKnown RBP11.44□□□□□ -0.58
SPG11-209ENST00000558253 POLR1AO95602 1720 aaPredicted RBP11.44□□□□□ -0.58
SPG11-209ENST00000558253 USP47Q96K76 1375 aa11.43□□□□□ -0.58
SPG11-209ENST00000558253 KIF7Q2M1P5 1343 aa11.43□□□□□ -0.58
SPG11-209ENST00000558253 PRKRIP1Q9H875 184 aaPredicted RBP11.43□□□□□ -0.58
SPG11-209ENST00000558253 SYCP2Q9BX26 1530 aa11.43□□□□□ -0.58
SPG11-209ENST00000558253 CCDC144AA2RUR9 1427 aa11.43□□□□□ -0.58
SPG11-209ENST00000558253 TTC37Q6PGP7 1564 aa11.42□□□□□ -0.58
SPG11-209ENST00000558253 ERICH6BQ5W0A0 696 aa11.42□□□□□ -0.58
SPG11-209ENST00000558253 MAGI2Q86UL8 1455 aa11.41□□□□□ -0.58
SPG11-209ENST00000558253 NPM1P06748 294 aaKnown RBP eCLIP11.41□□□□□ -0.58
SPG11-209ENST00000558253 ZBTB47Q9UFB7 747 aaPredicted RBP11.41□□□□□ -0.58
SPG11-209ENST00000558253 ZCCHC11Q5TAX3 1644 aaKnown RBP11.41□□□□□ -0.58
SPG11-209ENST00000558253 IQGAP3Q86VI3 1631 aa11.4□□□□□ -0.58
SPG11-209ENST00000558253 CD44P16070 742 aaKnown RBP11.4□□□□□ -0.58
SPG11-209ENST00000558253 WDR7Q9Y4E6 1490 aa11.39□□□□□ -0.59
SPG11-209ENST00000558253 C11orf95C9JLR9 678 aaPredicted RBP11.39□□□□□ -0.59
SPG11-209ENST00000558253 CARD11Q9BXL7 1154 aa11.39□□□□□ -0.59
SPG11-209ENST00000558253 ABCC1P33527 1531 aa11.39□□□□□ -0.59
SPG11-209ENST00000558253 KDM5CP41229 1560 aa11.38□□□□□ -0.59
SPG11-209ENST00000558253 ERCC6L2Q5T890 1561 aa11.38□□□□□ -0.59
SPG11-209ENST00000558253 DCAF11Q8TEB1 546 aa11.37□□□□□ -0.59
SPG11-209ENST00000558253 GPRASP1Q5JY77 1395 aa11.37□□□□□ -0.59
SPG11-209ENST00000558253 SPAG9O60271 1321 aaKnown RBP11.36□□□□□ -0.59
SPG11-209ENST00000558253 WASHC2CQ9Y4E1 1318 aa11.36□□□□□ -0.59
SPG11-209ENST00000558253 LAMC1P11047 1609 aa11.36□□□□□ -0.59
SPG11-209ENST00000558253 SLC24A1O60721 1099 aa11.36□□□□□ -0.59
SPG11-209ENST00000558253 IFNLR1Q8IU57 520 aaPredicted RBP11.36□□□□□ -0.59
SPG11-209ENST00000558253 PRAG1Q86YV5 1406 aa11.35□□□□□ -0.59
SPG11-209ENST00000558253 EIF2AK4Q9P2K8 1649 aaKnown RBP11.35□□□□□ -0.59
SPG11-209ENST00000558253 HNRNPUQ00839 825 aaKnown RBP eCLIP11.35□□□□□ -0.59
SPG11-209ENST00000558253 MRS2Q9HD23 443 aa11.35□□□□□ -0.59
SPG11-209ENST00000558253 KANK1Q14678 1352 aa11.34□□□□□ -0.59
SPG11-209ENST00000558253 RALBP1Q15311 655 aa11.34□□□□□ -0.59
SPG11-209ENST00000558253 ZBED9Q6R2W3 1325 aa11.34□□□□□ -0.59
SPG11-209ENST00000558253 PLA2R1Q13018 1463 aa11.33□□□□□ -0.6
SPG11-209ENST00000558253 DHX29Q7Z478 1369 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms