RNA–Protein interactions for RNA: ENST00000555425.5

SEC23A-210, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 5

Gene SEC23A, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-210ENST00000555425 LAMC3Q9Y6N6 1575 aa8.84□□□□□ -0.99
SEC23A-210ENST00000555425 LCE2BO14633 110 aa8.83□□□□□ -1
SEC23A-210ENST00000555425 FOSBP53539 338 aa8.83□□□□□ -1
SEC23A-210ENST00000555425 KCNC4Q03721 635 aa8.83□□□□□ -1
SEC23A-210ENST00000555425 TOP2AP11388 1531 aaKnown RBP8.83□□□□□ -1
SEC23A-210ENST00000555425 GFRA3O60609 400 aa8.82□□□□□ -1
SEC23A-210ENST00000555425 OXER1Q8TDS5 423 aa8.82□□□□□ -1
SEC23A-210ENST00000555425 UPF1Q92900 1129 aaKnown RBP eCLIP8.79□□□□□ -1
SEC23A-210ENST00000555425 PRDM2Q13029 1718 aa8.79□□□□□ -1
SEC23A-210ENST00000555425 JPH4Q96JJ6 628 aa8.78□□□□□ -1
SEC23A-210ENST00000555425 RABGEF1Q9UJ41 708 aa8.78□□□□□ -1
SEC23A-210ENST00000555425 ZDHHC16Q969W1 377 aa8.77□□□□□ -1.01
SEC23A-210ENST00000555425 SOWAHBA6NEL2 793 aa8.76□□□□□ -1.01
SEC23A-210ENST00000555425 NRG2O14511 850 aaPredicted RBP8.76□□□□□ -1.01
SEC23A-210ENST00000555425 BCAMP50895 628 aa8.76□□□□□ -1.01
SEC23A-210ENST00000555425 LAPTM4BQ86VI4 370 aa8.75□□□□□ -1.01
SEC23A-210ENST00000555425 PPP1R3GB7ZBB8 358 aa8.74□□□□□ -1.01
SEC23A-210ENST00000555425 ADAM33Q9BZ11 813 aa8.74□□□□□ -1.01
SEC23A-210ENST00000555425 ECM2O94769 699 aaPredicted RBP8.73□□□□□ -1.01
SEC23A-210ENST00000555425 ZNF787Q6DD87 383 aa8.73□□□□□ -1.01
SEC23A-210ENST00000555425 CADPSQ9ULU8 1353 aa8.72□□□□□ -1.01
SEC23A-210ENST00000555425 PDS5BQ9NTI5 1447 aa8.71□□□□□ -1.01
SEC23A-210ENST00000555425 ANO8Q9HCE9 1232 aaPredicted RBP8.71□□□□□ -1.02
SEC23A-210ENST00000555425 KIF21AQ7Z4S6 1674 aa8.71□□□□□ -1.02
SEC23A-210ENST00000555425 CFTRP13569 1480 aa8.7□□□□□ -1.02
SEC23A-210ENST00000555425 ERCC6Q03468 1493 aa8.7□□□□□ -1.02
SEC23A-210ENST00000555425 PKD2Q13563 968 aa8.7□□□□□ -1.02
SEC23A-210ENST00000555425 WBP1LQ9NX94 342 aa8.7□□□□□ -1.02
SEC23A-210ENST00000555425 CUX2O14529 1486 aa8.7□□□□□ -1.02
SEC23A-210ENST00000555425 NESP48681 1621 aa8.69□□□□□ -1.02
SEC23A-210ENST00000555425 ZFRQ96KR1 1074 aaKnown RBP8.69□□□□□ -1.02
SEC23A-210ENST00000555425 PROX2Q3B8N5 592 aa8.68□□□□□ -1.02
SEC23A-210ENST00000555425 THOC2Q8NI27 1593 aaKnown RBP8.68□□□□□ -1.02
SEC23A-210ENST00000555425 EVI5O60447 810 aa8.67□□□□□ -1.02
SEC23A-210ENST00000555425 ZNF775Q96BV0 537 aaPredicted RBP8.67□□□□□ -1.02
SEC23A-210ENST00000555425 CCDC88BA6NC98 1476 aa8.66□□□□□ -1.02
SEC23A-210ENST00000555425 PPP1R15BQ5SWA1 713 aa8.66□□□□□ -1.02
SEC23A-210ENST00000555425 PRKD2Q9BZL6 878 aa8.66□□□□□ -1.02
SEC23A-210ENST00000555425 TSR3Q9UJK0 312 aaKnown RBP8.64□□□□□ -1.03
SEC23A-210ENST00000555425 V9GY48 417 aaPredicted RBP8.64□□□□□ -1.03
SEC23A-210ENST00000555425 RGL2O15211 777 aa8.63□□□□□ -1.03
SEC23A-210ENST00000555425 WDR62O43379 1518 aa8.63□□□□□ -1.03
SEC23A-210ENST00000555425 CEP164Q9UPV0 1460 aa8.63□□□□□ -1.03
SEC23A-210ENST00000555425 ONECUT3O60422 494 aaPredicted RBP8.62□□□□□ -1.03
SEC23A-210ENST00000555425 CRISPLD2Q9H0B8 497 aa8.62□□□□□ -1.03
SEC23A-210ENST00000555425 KIAA1468Q9P260 1216 aa8.62□□□□□ -1.03
SEC23A-210ENST00000555425 COL9A1P20849 921 aa8.61□□□□□ -1.03
SEC23A-210ENST00000555425 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.61□□□□□ -1.03
SEC23A-210ENST00000555425 HPS5Q9UPZ3 1129 aa8.61□□□□□ -1.03
SEC23A-210ENST00000555425 FANCD2Q9BXW9 1451 aa8.61□□□□□ -1.03
SEC23A-210ENST00000555425 MRC2Q9UBG0 1479 aa8.61□□□□□ -1.03
SEC23A-210ENST00000555425 LRCH3Q96II8 777 aa8.6□□□□□ -1.03
SEC23A-210ENST00000555425 FAM98CQ17RN3 349 aaKnown RBP8.59□□□□□ -1.03
SEC23A-210ENST00000555425 FBXW7Q969H0 707 aa8.59□□□□□ -1.03
SEC23A-210ENST00000555425 ABCC8Q09428 1581 aa8.59□□□□□ -1.03
SEC23A-210ENST00000555425 SLC24A1O60721 1099 aa8.58□□□□□ -1.04
SEC23A-210ENST00000555425 SEPT9Q9UHD8 586 aaPredicted RBP8.58□□□□□ -1.04
SEC23A-210ENST00000555425 PDZRN3Q9UPQ7 1066 aa8.58□□□□□ -1.04
SEC23A-210ENST00000555425 PCDHGA10Q9Y5H3 936 aa8.58□□□□□ -1.04
SEC23A-210ENST00000555425 MAP3K9P80192 1104 aa8.56□□□□□ -1.04
SEC23A-210ENST00000555425 TYW1BQ6NUM6 668 aa8.56□□□□□ -1.04
SEC23A-210ENST00000555425 PDE4AP27815 886 aa8.54□□□□□ -1.04
SEC23A-210ENST00000555425 PPP1R18Q6NYC8 613 aa8.54□□□□□ -1.04
SEC23A-210ENST00000555425 PHF14O94880 888 aa8.53□□□□□ -1.04
SEC23A-210ENST00000555425 DNMBPQ6XZF7 1577 aa8.52□□□□□ -1.04
SEC23A-210ENST00000555425 TRIM6-TRIM34B2RNG4 842 aa8.52□□□□□ -1.05
SEC23A-210ENST00000555425 PPP4CP60510 307 aa8.52□□□□□ -1.05
SEC23A-210ENST00000555425 TJAP1Q5JTD0 557 aa8.52□□□□□ -1.05
SEC23A-210ENST00000555425 HS6ST3Q8IZP7 471 aa8.52□□□□□ -1.05
SEC23A-210ENST00000555425 RYDENQ9NUL5 291 aaKnown RBP8.52□□□□□ -1.05
SEC23A-210ENST00000555425 URB2Q14146 1524 aaKnown RBP8.51□□□□□ -1.05
SEC23A-210ENST00000555425 IL21Q9HBE4 155 aa8.51□□□□□ -1.05
SEC23A-210ENST00000555425 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.51□□□□□ -1.05
SEC23A-210ENST00000555425 SUPT5HO00267 1087 aaKnown RBP8.5□□□□□ -1.05
SEC23A-210ENST00000555425 WDR97A6NE52 1622 aa8.5□□□□□ -1.05
SEC23A-210ENST00000555425 TOPBP1Q92547 1522 aa8.49□□□□□ -1.05
SEC23A-210ENST00000555425 MTRQ99707 1265 aa8.48□□□□□ -1.05
SEC23A-210ENST00000555425 NCKAP5LQ9HCH0 1330 aa8.48□□□□□ -1.05
SEC23A-210ENST00000555425 AMER1Q5JTC6 1135 aaPredicted RBP8.47□□□□□ -1.05
SEC23A-210ENST00000555425 C6orf132Q5T0Z8 1188 aa8.47□□□□□ -1.05
SEC23A-210ENST00000555425 DDX27Q96GQ7 796 aaKnown RBP8.47□□□□□ -1.05
SEC23A-210ENST00000555425 IFT140Q96RY7 1462 aa8.46□□□□□ -1.05
SEC23A-210ENST00000555425 EPAS1Q99814 870 aa8.46□□□□□ -1.06
SEC23A-210ENST00000555425 GGCXP38435 758 aa8.45□□□□□ -1.06
SEC23A-210ENST00000555425 TARBP1Q13395 1621 aaKnown RBP8.44□□□□□ -1.06
SEC23A-210ENST00000555425 BIVM-ERCC5R4GMW8 1640 aa8.44□□□□□ -1.06
SEC23A-210ENST00000555425 PKDCCQ504Y2 493 aa8.44□□□□□ -1.06
SEC23A-210ENST00000555425 RTN4Q9NQC3 1192 aaKnown RBP8.44□□□□□ -1.06
SEC23A-210ENST00000555425 PACS2Q86VP3 889 aa8.43□□□□□ -1.06
SEC23A-210ENST00000555425 LARP6Q9BRS8 491 aaKnown RBP8.43□□□□□ -1.06
SEC23A-210ENST00000555425 TREML4Q6UXN2 200 aa8.42□□□□□ -1.06
SEC23A-210ENST00000555425 TOP2BQ02880 1626 aa8.42□□□□□ -1.06
SEC23A-210ENST00000555425 POLA1P09884 1462 aaPredicted RBP8.41□□□□□ -1.06
SEC23A-210ENST00000555425 EMILIN3Q9NT22 766 aa8.41□□□□□ -1.06
SEC23A-210ENST00000555425 CUX1P39880 1505 aa8.4□□□□□ -1.06
SEC23A-210ENST00000555425 DGAT1O75907 488 aa8.4□□□□□ -1.06
SEC23A-210ENST00000555425 MYT1Q01538 1121 aa8.4□□□□□ -1.06
SEC23A-210ENST00000555425 EIF4G3O43432 1585 aaKnown RBP8.39□□□□□ -1.07
SEC23A-210ENST00000555425 CHGAP10645 457 aaKnown RBP8.39□□□□□ -1.07
SEC23A-210ENST00000555425 MFSD10Q14728 455 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms