RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 LSM11P83369 360 aaKnown RBP eCLIP9.02□□□□□ -0.97
ATXN3-229ENST00000554672 ANKRD13DQ6ZTN6 518 aa9.02□□□□□ -0.97
ATXN3-229ENST00000554672 UPF1Q92900 1129 aaKnown RBP eCLIP9.02□□□□□ -0.97
ATXN3-229ENST00000554672 LARP6Q9BRS8 491 aaKnown RBP9.02□□□□□ -0.97
ATXN3-229ENST00000554672 TBC1D12O60347 775 aa9□□□□□ -0.97
ATXN3-229ENST00000554672 MFSD10Q14728 455 aa9□□□□□ -0.97
ATXN3-229ENST00000554672 TDRD9Q8NDG6 1382 aaKnown RBP8.99□□□□□ -0.97
ATXN3-229ENST00000554672 PBX2P40425 430 aa8.99□□□□□ -0.97
ATXN3-229ENST00000554672 AMER1Q5JTC6 1135 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-229ENST00000554672 BBXQ8WY36 941 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-229ENST00000554672 EIF4G3O43432 1585 aaKnown RBP8.99□□□□□ -0.97
ATXN3-229ENST00000554672 SOGA1O94964 1423 aa8.98□□□□□ -0.97
ATXN3-229ENST00000554672 MYT1LQ9UL68 1186 aa8.98□□□□□ -0.97
ATXN3-229ENST00000554672 PSDA5PKW4 1024 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-229ENST00000554672 DDX27Q96GQ7 796 aaKnown RBP8.97□□□□□ -0.97
ATXN3-229ENST00000554672 DNMBPQ6XZF7 1577 aa8.97□□□□□ -0.97
ATXN3-229ENST00000554672 ARHGAP33O14559 1287 aa8.96□□□□□ -0.98
ATXN3-229ENST00000554672 RNF166Q96A37 237 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-229ENST00000554672 POLA1P09884 1462 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-229ENST00000554672 PSEN2P49810 448 aa8.95□□□□□ -0.98
ATXN3-229ENST00000554672 ANO8Q9HCE9 1232 aaPredicted RBP8.95□□□□□ -0.98
ATXN3-229ENST00000554672 EMILIN3Q9NT22 766 aa8.95□□□□□ -0.98
ATXN3-229ENST00000554672 RAD54L2Q9Y4B4 1467 aa8.95□□□□□ -0.98
ATXN3-229ENST00000554672 TARBP1Q13395 1621 aaKnown RBP8.94□□□□□ -0.98
ATXN3-229ENST00000554672 DMRTA1Q5VZB9 504 aa8.94□□□□□ -0.98
ATXN3-229ENST00000554672 PPP4R3BQ5MIZ7 849 aa8.93□□□□□ -0.98
ATXN3-229ENST00000554672 SNAPC4Q5SXM2 1469 aa8.92□□□□□ -0.98
ATXN3-229ENST00000554672 PTGER2P43116 358 aa8.92□□□□□ -0.98
ATXN3-229ENST00000554672 EVI5O60447 810 aa8.91□□□□□ -0.98
ATXN3-229ENST00000554672 FOSBP53539 338 aa8.91□□□□□ -0.98
ATXN3-229ENST00000554672 CHD1O14646 1710 aa8.91□□□□□ -0.98
ATXN3-229ENST00000554672 MAGI1Q96QZ7 1491 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-229ENST00000554672 ADGRD1Q6QNK2 874 aa8.9□□□□□ -0.98
ATXN3-229ENST00000554672 ZNF454Q8N9F8 522 aa8.9□□□□□ -0.98
ATXN3-229ENST00000554672 CLASP1Q7Z460 1538 aa8.9□□□□□ -0.99
ATXN3-229ENST00000554672 GRIN2BQ13224 1484 aa8.89□□□□□ -0.99
ATXN3-229ENST00000554672 GAPVD1Q14C86 1478 aa8.89□□□□□ -0.99
ATXN3-229ENST00000554672 SYNJ1O43426 1573 aa8.89□□□□□ -0.99
ATXN3-229ENST00000554672 SYNJ2O15056 1496 aa8.89□□□□□ -0.99
ATXN3-229ENST00000554672 HRO43593 1189 aa8.88□□□□□ -0.99
ATXN3-229ENST00000554672 MAP3K9P80192 1104 aa8.88□□□□□ -0.99
ATXN3-229ENST00000554672 CAMK2BQ13554 666 aa8.88□□□□□ -0.99
ATXN3-229ENST00000554672 SPRYD3Q8NCJ5 442 aa8.88□□□□□ -0.99
ATXN3-229ENST00000554672 PRDM2Q13029 1718 aa8.88□□□□□ -0.99
ATXN3-229ENST00000554672 TK2O00142 265 aa8.87□□□□□ -0.99
ATXN3-229ENST00000554672 KCNK17Q96T54 332 aa8.87□□□□□ -0.99
ATXN3-229ENST00000554672 BCL2L12Q9HB09 334 aa8.87□□□□□ -0.99
ATXN3-229ENST00000554672 FGD5Q6ZNL6 1462 aa8.86□□□□□ -0.99
ATXN3-229ENST00000554672 JPH4Q96JJ6 628 aa8.85□□□□□ -0.99
ATXN3-229ENST00000554672 WDR97A6NE52 1622 aa8.84□□□□□ -0.99
ATXN3-229ENST00000554672 ADAM33Q9BZ11 813 aa8.84□□□□□ -0.99
ATXN3-229ENST00000554672 PAXIP1Q6ZW49 1069 aaPredicted RBP8.83□□□□□ -1
ATXN3-229ENST00000554672 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.83□□□□□ -1
ATXN3-229ENST00000554672 ZDHHC16Q969W1 377 aa8.82□□□□□ -1
ATXN3-229ENST00000554672 VPS9D1Q9Y2B5 631 aa8.82□□□□□ -1
ATXN3-229ENST00000554672 PCDHGA10Q9Y5H3 936 aa8.82□□□□□ -1
ATXN3-229ENST00000554672 DPYSL4O14531 572 aa8.81□□□□□ -1
ATXN3-229ENST00000554672 CFAP44Q96MT7 982 aa8.81□□□□□ -1
ATXN3-229ENST00000554672 PTPREP23469 700 aa8.79□□□□□ -1
ATXN3-229ENST00000554672 FAM69CQ0P6D2 419 aa8.79□□□□□ -1
ATXN3-229ENST00000554672 ZBED2Q9BTP6 218 aa8.79□□□□□ -1
ATXN3-229ENST00000554672 SLC4A5Q9BY07 1137 aa8.79□□□□□ -1
ATXN3-229ENST00000554672 CUX1P39880 1505 aa8.79□□□□□ -1
ATXN3-229ENST00000554672 BHMG1C9JSJ3 638 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-229ENST00000554672 KCNH8Q96L42 1107 aa8.77□□□□□ -1.01
ATXN3-229ENST00000554672 ABCA10Q8WWZ4 1543 aa8.76□□□□□ -1.01
ATXN3-229ENST00000554672 NUP160Q12769 1436 aa8.76□□□□□ -1.01
ATXN3-229ENST00000554672 PHF14O94880 888 aa8.75□□□□□ -1.01
ATXN3-229ENST00000554672 GRIN2AQ12879 1464 aa8.75□□□□□ -1.01
ATXN3-229ENST00000554672 ERCC6L2Q5T890 1561 aa8.74□□□□□ -1.01
ATXN3-229ENST00000554672 COL9A1P20849 921 aa8.74□□□□□ -1.01
ATXN3-229ENST00000554672 TYW1BQ6NUM6 668 aa8.74□□□□□ -1.01
ATXN3-229ENST00000554672 KCTD12Q96CX2 325 aaKnown RBP8.73□□□□□ -1.01
ATXN3-229ENST00000554672 HCSTQ9UBK5 93 aa8.73□□□□□ -1.01
ATXN3-229ENST00000554672 FHAD1B1AJZ9 1412 aa8.72□□□□□ -1.01
ATXN3-229ENST00000554672 WRNQ14191 1432 aaPredicted RBP eCLIP8.72□□□□□ -1.01
ATXN3-229ENST00000554672 PRG4Q92954 1404 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-229ENST00000554672 FBXW7Q969H0 707 aa8.72□□□□□ -1.01
ATXN3-229ENST00000554672 CEP170Q5SW79 1584 aa8.72□□□□□ -1.01
ATXN3-229ENST00000554672 DDX12PQ92771 950 aa8.71□□□□□ -1.02
ATXN3-229ENST00000554672 ABCC10Q5T3U5 1492 aa8.7□□□□□ -1.02
ATXN3-229ENST00000554672 PPP1R3GB7ZBB8 358 aa8.7□□□□□ -1.02
ATXN3-229ENST00000554672 PDIA6Q15084 440 aa8.7□□□□□ -1.02
ATXN3-229ENST00000554672 E2F4Q16254 413 aa8.7□□□□□ -1.02
ATXN3-229ENST00000554672 PROX2Q3B8N5 592 aa8.7□□□□□ -1.02
ATXN3-229ENST00000554672 STAC3Q96MF2 364 aa8.7□□□□□ -1.02
ATXN3-229ENST00000554672 EPAS1Q99814 870 aa8.7□□□□□ -1.02
ATXN3-229ENST00000554672 C6orf132Q5T0Z8 1188 aa8.69□□□□□ -1.02
ATXN3-229ENST00000554672 TSHZ2Q9NRE2 1034 aa8.68□□□□□ -1.02
ATXN3-229ENST00000554672 ARIH1Q9Y4X5 557 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-229ENST00000554672 ABCA5Q8WWZ7 1642 aa8.68□□□□□ -1.02
ATXN3-229ENST00000554672 RBM33Q96EV2 1170 aaKnown RBP8.67□□□□□ -1.02
ATXN3-229ENST00000554672 SPDYE16A6NNV3 312 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-229ENST00000554672 PRIM1P49642 420 aaKnown RBP8.66□□□□□ -1.02
ATXN3-229ENST00000554672 WDR70Q9NW82 654 aa8.66□□□□□ -1.02
ATXN3-229ENST00000554672 RABGEF1Q9UJ41 708 aa8.66□□□□□ -1.02
ATXN3-229ENST00000554672 PBRM1Q86U86 1689 aa8.65□□□□□ -1.02
ATXN3-229ENST00000554672 MRPL50Q8N5N7 158 aaKnown RBP8.65□□□□□ -1.02
ATXN3-229ENST00000554672 SHROOM2Q13796 1616 aa8.65□□□□□ -1.03
ATXN3-229ENST00000554672 PTPN5P54829 565 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms