RNA–Protein interactions for RNA: ENST00000554455.5

HNRNPC-211, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-211ENST00000554455 NPM1P06748 294 aaKnown RBP eCLIP11.05□□□□□ -0.64
HNRNPC-211ENST00000554455 FYCO1Q9BQS8 1478 aa11.05□□□□□ -0.64
HNRNPC-211ENST00000554455 CUL7Q14999 1698 aa11.03□□□□□ -0.64
HNRNPC-211ENST00000554455 NBPF20Q3BBV1 942 aa11.03□□□□□ -0.64
HNRNPC-211ENST00000554455 TMED8Q6PL24 325 aaPredicted RBP11.03□□□□□ -0.64
HNRNPC-211ENST00000554455 ZNF592Q92610 1267 aa11.03□□□□□ -0.64
HNRNPC-211ENST00000554455 DNAJC2Q99543 621 aaKnown RBP11.03□□□□□ -0.64
HNRNPC-211ENST00000554455 DNMBPQ6XZF7 1577 aa11.03□□□□□ -0.64
HNRNPC-211ENST00000554455 ABCA10Q8WWZ4 1543 aa11.02□□□□□ -0.65
HNRNPC-211ENST00000554455 RALBP1Q15311 655 aa11.02□□□□□ -0.65
HNRNPC-211ENST00000554455 PHLDB1Q86UU1 1377 aa11.01□□□□□ -0.65
HNRNPC-211ENST00000554455 DNTTIP2Q5QJE6 756 aaKnown RBP11□□□□□ -0.65
HNRNPC-211ENST00000554455 CARD10Q9BWT7 1032 aa11□□□□□ -0.65
HNRNPC-211ENST00000554455 CASKIN1Q8WXD9 1431 aa11□□□□□ -0.65
HNRNPC-211ENST00000554455 CFAP65Q6ZU64 1925 aaKnown RBP10.99□□□□□ -0.65
HNRNPC-211ENST00000554455 TCERG1O14776 1098 aaKnown RBP10.99□□□□□ -0.65
HNRNPC-211ENST00000554455 SOX12O15370 315 aa10.99□□□□□ -0.65
HNRNPC-211ENST00000554455 FAM43BQ6ZT52 329 aaPredicted RBP10.99□□□□□ -0.65
HNRNPC-211ENST00000554455 CTTNBP2Q8WZ74 1663 aa10.99□□□□□ -0.65
HNRNPC-211ENST00000554455 PSMD1Q99460 953 aa10.99□□□□□ -0.65
HNRNPC-211ENST00000554455 MYCNP04198 464 aaPredicted RBP10.98□□□□□ -0.65
HNRNPC-211ENST00000554455 MS4A1P11836 297 aa10.98□□□□□ -0.65
HNRNPC-211ENST00000554455 CC2D1BQ5T0F9 858 aaKnown RBP10.98□□□□□ -0.65
HNRNPC-211ENST00000554455 PATL2C9JE40 543 aaKnown RBP10.98□□□□□ -0.65
HNRNPC-211ENST00000554455 APPP05067 770 aa10.98□□□□□ -0.65
HNRNPC-211ENST00000554455 RIPK4P57078 832 aa10.98□□□□□ -0.65
HNRNPC-211ENST00000554455 CCDC94Q9BW85 323 aaPredicted RBP10.98□□□□□ -0.65
HNRNPC-211ENST00000554455 FANCD2Q9BXW9 1451 aa10.97□□□□□ -0.65
HNRNPC-211ENST00000554455 ZBED9Q6R2W3 1325 aa10.97□□□□□ -0.65
HNRNPC-211ENST00000554455 FSD2A1L4K1 749 aa10.97□□□□□ -0.65
HNRNPC-211ENST00000554455 ESPNB1AK53 854 aa10.97□□□□□ -0.65
HNRNPC-211ENST00000554455 WDR97A6NE52 1622 aa10.96□□□□□ -0.65
HNRNPC-211ENST00000554455 EGFL6Q8IUX8 553 aa10.96□□□□□ -0.65
HNRNPC-211ENST00000554455 ISY1Q9ULR0 285 aaKnown RBP10.96□□□□□ -0.65
HNRNPC-211ENST00000554455 THOC2Q8NI27 1593 aaKnown RBP10.96□□□□□ -0.65
HNRNPC-211ENST00000554455 B4GALNT3Q6L9W6 998 aa10.95□□□□□ -0.66
HNRNPC-211ENST00000554455 CC2D2BQ6DHV5 1058 aa10.95□□□□□ -0.66
HNRNPC-211ENST00000554455 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.95□□□□□ -0.66
HNRNPC-211ENST00000554455 FMN1Q68DA7 1419 aa10.95□□□□□ -0.66
HNRNPC-211ENST00000554455 KIAA1211Q6ZU35 1233 aa10.94□□□□□ -0.66
HNRNPC-211ENST00000554455 TSPYL1Q9H0U9 437 aa10.94□□□□□ -0.66
HNRNPC-211ENST00000554455 TOPBP1Q92547 1522 aa10.94□□□□□ -0.66
HNRNPC-211ENST00000554455 TRIM52Q96A61 297 aa10.93□□□□□ -0.66
HNRNPC-211ENST00000554455 SAMD9Q5K651 1589 aa10.93□□□□□ -0.66
HNRNPC-211ENST00000554455 OFD1O75665 1012 aa10.93□□□□□ -0.66
HNRNPC-211ENST00000554455 POLA1P09884 1462 aaPredicted RBP10.92□□□□□ -0.66
HNRNPC-211ENST00000554455 SNAPC4Q5SXM2 1469 aa10.92□□□□□ -0.66
HNRNPC-211ENST00000554455 KIF21AQ7Z4S6 1674 aa10.92□□□□□ -0.66
HNRNPC-211ENST00000554455 DYNC1I1O14576 645 aa10.92□□□□□ -0.66
HNRNPC-211ENST00000554455 RNF123Q5XPI4 1314 aa10.91□□□□□ -0.66
HNRNPC-211ENST00000554455 FHOD3Q2V2M9 1422 aa10.91□□□□□ -0.66
HNRNPC-211ENST00000554455 FGD6Q6ZV73 1430 aa10.91□□□□□ -0.66
HNRNPC-211ENST00000554455 NBPF11Q86T75 865 aa10.91□□□□□ -0.66
HNRNPC-211ENST00000554455 BACH2Q9BYV9 841 aa10.91□□□□□ -0.66
HNRNPC-211ENST00000554455 MAFGO15525 162 aa10.9□□□□□ -0.66
HNRNPC-211ENST00000554455 HFM1A2PYH4 1435 aa10.9□□□□□ -0.66
HNRNPC-211ENST00000554455 PPP1R15AO75807 674 aaPredicted RBP10.9□□□□□ -0.67
HNRNPC-211ENST00000554455 IRX5P78411 483 aaPredicted RBP10.9□□□□□ -0.67
HNRNPC-211ENST00000554455 NBPF1Q3BBV0 1214 aa10.9□□□□□ -0.67
HNRNPC-211ENST00000554455 HSP90AB3PQ58FF7 597 aa10.9□□□□□ -0.67
HNRNPC-211ENST00000554455 ABCA5Q8WWZ7 1642 aa10.88□□□□□ -0.67
HNRNPC-211ENST00000554455 PTPN23Q9H3S7 1636 aa10.88□□□□□ -0.67
HNRNPC-211ENST00000554455 FAM50AQ14320 339 aaKnown RBP10.88□□□□□ -0.67
HNRNPC-211ENST00000554455 UACAQ9BZF9 1416 aa10.88□□□□□ -0.67
HNRNPC-211ENST00000554455 CCDC18Q5T9S5 1454 aa10.88□□□□□ -0.67
HNRNPC-211ENST00000554455 EHBP1L1Q8N3D4 1523 aa10.88□□□□□ -0.67
HNRNPC-211ENST00000554455 TTC36A6NLP5 189 aa10.88□□□□□ -0.67
HNRNPC-211ENST00000554455 XRCC6P12956 609 aaKnown RBP eCLIP10.88□□□□□ -0.673e-6■□□□□ 10.7
HNRNPC-211ENST00000554455 HOXD11P31277 338 aaPredicted RBP10.88□□□□□ -0.67
HNRNPC-211ENST00000554455 RAD54L2Q9Y4B4 1467 aa10.87□□□□□ -0.67
HNRNPC-211ENST00000554455 VIRMAQ69YN4 1812 aaKnown RBP10.87□□□□□ -0.67
HNRNPC-211ENST00000554455 NGEFQ8N5V2 710 aa10.87□□□□□ -0.67
HNRNPC-211ENST00000554455 EFCC1Q9HA90 598 aa10.87□□□□□ -0.67
HNRNPC-211ENST00000554455 LAMC3Q9Y6N6 1575 aa10.87□□□□□ -0.67
HNRNPC-211ENST00000554455 GRIN2BQ13224 1484 aa10.87□□□□□ -0.67
HNRNPC-211ENST00000554455 ERBB4Q15303 1308 aa10.86□□□□□ -0.67
HNRNPC-211ENST00000554455 FRAT2O75474 233 aaPredicted RBP10.85□□□□□ -0.67
HNRNPC-211ENST00000554455 PDE4AP27815 886 aa10.85□□□□□ -0.67
HNRNPC-211ENST00000554455 MRE11P49959 708 aa10.85□□□□□ -0.67
HNRNPC-211ENST00000554455 SUPT6HQ7KZ85 1726 aaKnown RBP10.85□□□□□ -0.67
HNRNPC-211ENST00000554455 ARHGEF11O15085 1522 aa10.85□□□□□ -0.67
HNRNPC-211ENST00000554455 ANP32CO43423 234 aa10.85□□□□□ -0.67
HNRNPC-211ENST00000554455 PRDM16Q9HAZ2 1276 aa10.85□□□□□ -0.67
HNRNPC-211ENST00000554455 RAI14Q9P0K7 980 aa10.85□□□□□ -0.67
HNRNPC-211ENST00000554455 MYOM3Q5VTT5 1437 aa10.84□□□□□ -0.67
HNRNPC-211ENST00000554455 AKNAQ7Z591 1439 aa10.84□□□□□ -0.67
HNRNPC-211ENST00000554455 ANAPC15P60006 121 aa10.84□□□□□ -0.67
HNRNPC-211ENST00000554455 CERS3Q8IU89 383 aa10.84□□□□□ -0.67
HNRNPC-211ENST00000554455 GPATCH11Q8N954 259 aa10.84□□□□□ -0.67
HNRNPC-211ENST00000554455 SIN3AQ96ST3 1273 aa10.84□□□□□ -0.67
HNRNPC-211ENST00000554455 TULP2O00295 520 aa10.83□□□□□ -0.68
HNRNPC-211ENST00000554455 PLCB2Q00722 1185 aa10.83□□□□□ -0.68
HNRNPC-211ENST00000554455 NBPF9Q3BBW0 867 aa10.83□□□□□ -0.68
HNRNPC-211ENST00000554455 NINLQ9Y2I6 1382 aa10.83□□□□□ -0.68
HNRNPC-211ENST00000554455 TCOF1Q13428 1488 aaKnown RBP10.83□□□□□ -0.68
HNRNPC-211ENST00000554455 GCC2Q8IWJ2 1684 aa10.83□□□□□ -0.68
HNRNPC-211ENST00000554455 LRRIQ1Q96JM4 1722 aa10.83□□□□□ -0.68
HNRNPC-211ENST00000554455 SATB1Q01826 763 aa10.82□□□□□ -0.68
HNRNPC-211ENST00000554455 CFAP44Q96MT7 982 aa10.82□□□□□ -0.68
HNRNPC-211ENST00000554455 SH3BP1Q9Y3L3 701 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms