RNA–Protein interactions for RNA: ENST00000549415.1

USP15-214, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-214ENST00000549415 MMRN1Q13201 1228 aa11.37□□□□□ -0.59
USP15-214ENST00000549415 POTEEQ6S8J3 1075 aa11.37□□□□□ -0.59
USP15-214ENST00000549415 RIMBP3CA6NJZ7 1639 aa11.37□□□□□ -0.59
USP15-214ENST00000549415 RIMBP3BA6NNM3 1639 aa11.37□□□□□ -0.59
USP15-214ENST00000549415 RIMBP3Q9UFD9 1639 aa11.37□□□□□ -0.59
USP15-214ENST00000549415 EMILIN3Q9NT22 766 aa11.35□□□□□ -0.59
USP15-214ENST00000549415 EIF4G3O43432 1585 aaKnown RBP11.35□□□□□ -0.59
USP15-214ENST00000549415 AXIN2Q9Y2T1 843 aa11.34□□□□□ -0.59
USP15-214ENST00000549415 DNMBPQ6XZF7 1577 aa11.33□□□□□ -0.6
USP15-214ENST00000549415 PSDA5PKW4 1024 aaPredicted RBP11.31□□□□□ -0.6
USP15-214ENST00000549415 ARHGEF11O15085 1522 aa11.3□□□□□ -0.6
USP15-214ENST00000549415 ANKRD13DQ6ZTN6 518 aa11.3□□□□□ -0.6
USP15-214ENST00000549415 CHD1O14646 1710 aa11.29□□□□□ -0.6
USP15-214ENST00000549415 EVI5O60447 810 aa11.29□□□□□ -0.6
USP15-214ENST00000549415 PBX2P40425 430 aa11.29□□□□□ -0.6
USP15-214ENST00000549415 LSM11P83369 360 aaKnown RBP eCLIP11.29□□□□□ -0.6
USP15-214ENST00000549415 ABCC8Q09428 1581 aa11.28□□□□□ -0.6
USP15-214ENST00000549415 AQRO60306 1485 aaKnown RBP eCLIP11.28□□□□□ -0.6
USP15-214ENST00000549415 MAP3K9P80192 1104 aa11.28□□□□□ -0.6
USP15-214ENST00000549415 PPP4R3BQ5MIZ7 849 aa11.28□□□□□ -0.6
USP15-214ENST00000549415 CAMK2BQ13554 666 aa11.27□□□□□ -0.61
USP15-214ENST00000549415 TARBP1Q13395 1621 aaKnown RBP11.27□□□□□ -0.61
USP15-214ENST00000549415 ANO8Q9HCE9 1232 aaPredicted RBP11.26□□□□□ -0.61
USP15-214ENST00000549415 POLA1P09884 1462 aaPredicted RBP11.25□□□□□ -0.61
USP15-214ENST00000549415 ZNF454Q8N9F8 522 aa11.25□□□□□ -0.61
USP15-214ENST00000549415 ARHGAP33O14559 1287 aa11.24□□□□□ -0.61
USP15-214ENST00000549415 PSEN2P49810 448 aa11.24□□□□□ -0.61
USP15-214ENST00000549415 CYB5RLQ6IPT4 315 aa11.24□□□□□ -0.61
USP15-214ENST00000549415 RAD54L2Q9Y4B4 1467 aa11.24□□□□□ -0.61
USP15-214ENST00000549415 FOSBP53539 338 aa11.23□□□□□ -0.61
USP15-214ENST00000549415 DPYSL4O14531 572 aa11.22□□□□□ -0.61
USP15-214ENST00000549415 DMRTA1Q5VZB9 504 aa11.22□□□□□ -0.61
USP15-214ENST00000549415 TDRD9Q8NDG6 1382 aaKnown RBP11.2□□□□□ -0.62
USP15-214ENST00000549415 JPH4Q96JJ6 628 aa11.2□□□□□ -0.62
USP15-214ENST00000549415 TSHZ2Q9NRE2 1034 aa11.2□□□□□ -0.62
USP15-214ENST00000549415 FGD5Q6ZNL6 1462 aa11.19□□□□□ -0.62
USP15-214ENST00000549415 ARAP1Q96P48 1450 aa11.19□□□□□ -0.62
USP15-214ENST00000549415 KCNK17Q96T54 332 aa11.19□□□□□ -0.62
USP15-214ENST00000549415 MYT1LQ9UL68 1186 aa11.19□□□□□ -0.62
USP15-214ENST00000549415 SNAPC4Q5SXM2 1469 aa11.19□□□□□ -0.62
USP15-214ENST00000549415 SOGA1O94964 1423 aa11.18□□□□□ -0.62
USP15-214ENST00000549415 RNF166Q96A37 237 aaPredicted RBP11.17□□□□□ -0.62
USP15-214ENST00000549415 CUX1P39880 1505 aa11.16□□□□□ -0.62
USP15-214ENST00000549415 ADGRD1Q6QNK2 874 aa11.16□□□□□ -0.62
USP15-214ENST00000549415 ADAM33Q9BZ11 813 aa11.16□□□□□ -0.62
USP15-214ENST00000549415 BCL2L12Q9HB09 334 aa11.16□□□□□ -0.62
USP15-214ENST00000549415 ZDHHC16Q969W1 377 aa11.15□□□□□ -0.62
USP15-214ENST00000549415 PCDHGA10Q9Y5H3 936 aa11.15□□□□□ -0.62
USP15-214ENST00000549415 PTGER2P43116 358 aa11.14□□□□□ -0.63
USP15-214ENST00000549415 E2F4Q16254 413 aa11.14□□□□□ -0.63
USP15-214ENST00000549415 WDR70Q9NW82 654 aa11.14□□□□□ -0.63
USP15-214ENST00000549415 CHMP7Q8WUX9 453 aaPredicted RBP11.12□□□□□ -0.63
USP15-214ENST00000549415 SYNJ1O43426 1573 aa11.11□□□□□ -0.63
USP15-214ENST00000549415 CLASP1Q7Z460 1538 aa11.11□□□□□ -0.63
USP15-214ENST00000549415 TK2O00142 265 aa11.11□□□□□ -0.63
USP15-214ENST00000549415 PTPREP23469 700 aa11.11□□□□□ -0.63
USP15-214ENST00000549415 KCNH8Q96L42 1107 aa11.11□□□□□ -0.63
USP15-214ENST00000549415 GRIN2BQ13224 1484 aa11.11□□□□□ -0.63
USP15-214ENST00000549415 WDR97A6NE52 1622 aa11.1□□□□□ -0.63
USP15-214ENST00000549415 HRO43593 1189 aa11.1□□□□□ -0.63
USP15-214ENST00000549415 MAGI1Q96QZ7 1491 aaPredicted RBP11.1□□□□□ -0.63
USP15-214ENST00000549415 PBRM1Q86U86 1689 aa11.1□□□□□ -0.63
USP15-214ENST00000549415 PHF14O94880 888 aa11.09□□□□□ -0.63
USP15-214ENST00000549415 PDIA6Q15084 440 aa11.09□□□□□ -0.63
USP15-214ENST00000549415 TYW1BQ6NUM6 668 aa11.08□□□□□ -0.64
USP15-214ENST00000549415 DDX12PQ92771 950 aa11.08□□□□□ -0.64
USP15-214ENST00000549415 SYNJ2O15056 1496 aa11.07□□□□□ -0.64
USP15-214ENST00000549415 VPS9D1Q9Y2B5 631 aa11.07□□□□□ -0.64
USP15-214ENST00000549415 GAPVD1Q14C86 1478 aa11.06□□□□□ -0.64
USP15-214ENST00000549415 SUPT5HO00267 1087 aaKnown RBP11.06□□□□□ -0.64
USP15-214ENST00000549415 FBXW7Q969H0 707 aa11.05□□□□□ -0.64
USP15-214ENST00000549415 ZBED2Q9BTP6 218 aa11.05□□□□□ -0.64
USP15-214ENST00000549415 ARIH1Q9Y4X5 557 aaPredicted RBP11.05□□□□□ -0.64
USP15-214ENST00000549415 SPDYE16A6NNV3 312 aaPredicted RBP11.04□□□□□ -0.64
USP15-214ENST00000549415 COL9A1P20849 921 aa11.04□□□□□ -0.64
USP15-214ENST00000549415 PLCB2Q00722 1185 aa11.04□□□□□ -0.64
USP15-214ENST00000549415 ABCA5Q8WWZ7 1642 aa11.03□□□□□ -0.64
USP15-214ENST00000549415 EPAS1Q99814 870 aa11.03□□□□□ -0.64
USP15-214ENST00000549415 SLC4A5Q9BY07 1137 aa11.03□□□□□ -0.64
USP15-214ENST00000549415 RBM33Q96EV2 1170 aaKnown RBP11.02□□□□□ -0.65
USP15-214ENST00000549415 ABCA10Q8WWZ4 1543 aa11.01□□□□□ -0.65
USP15-214ENST00000549415 PPP1R3GB7ZBB8 358 aa11.01□□□□□ -0.65
USP15-214ENST00000549415 NBR1Q14596 966 aa11□□□□□ -0.65
USP15-214ENST00000549415 C6orf132Q5T0Z8 1188 aa11□□□□□ -0.65
USP15-214ENST00000549415 PROX2Q3B8N5 592 aa10.99□□□□□ -0.65
USP15-214ENST00000549415 BHMG1C9JSJ3 638 aaPredicted RBP10.98□□□□□ -0.65
USP15-214ENST00000549415 PRIM1P49642 420 aaKnown RBP10.98□□□□□ -0.65
USP15-214ENST00000549415 KCNV2Q8TDN2 545 aa10.98□□□□□ -0.65
USP15-214ENST00000549415 STAC3Q96MF2 364 aa10.98□□□□□ -0.65
USP15-214ENST00000549415 GRIN2AQ12879 1464 aa10.98□□□□□ -0.65
USP15-214ENST00000549415 ADAMTS12P58397 1594 aa10.98□□□□□ -0.65
USP15-214ENST00000549415 ERCC6L2Q5T890 1561 aa10.98□□□□□ -0.65
USP15-214ENST00000549415 GRXCR2A6NFK2 248 aa10.97□□□□□ -0.65
USP15-214ENST00000549415 WRNQ14191 1432 aaPredicted RBP eCLIP10.96□□□□□ -0.65
USP15-214ENST00000549415 EN1Q05925 392 aaPredicted RBP10.96□□□□□ -0.65
USP15-214ENST00000549415 TSR1Q2NL82 804 aaKnown RBP10.96□□□□□ -0.65
USP15-214ENST00000549415 KCTD12Q96CX2 325 aaKnown RBP10.96□□□□□ -0.65
USP15-214ENST00000549415 CEP170Q5SW79 1584 aa10.95□□□□□ -0.66
USP15-214ENST00000549415 MAP3K7O43318 606 aa10.94□□□□□ -0.66
USP15-214ENST00000549415 BIVM-ERCC5R4GMW8 1640 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms