RNA–Protein interactions for RNA: ENST00000549415.1

USP15-214, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-214ENST00000549415 AEBP2Q6ZN18 517 aaPredicted RBP26.27■■□□□ 1.8
USP15-214ENST00000549415 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
USP15-214ENST00000549415 SENP3Q9H4L4 574 aaPredicted RBP22.27■■□□□ 1.16
USP15-214ENST00000549415 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
USP15-214ENST00000549415 FOXD1Q16676 465 aa20.78■□□□□ 0.92
USP15-214ENST00000549415 PLPPR3Q6T4P5 718 aa20.26■□□□□ 0.83
USP15-214ENST00000549415 PPP6R1Q9UPN7 881 aa19.71■□□□□ 0.75
USP15-214ENST00000549415 ADRA2BP18089 450 aa19.66■□□□□ 0.74
USP15-214ENST00000549415 PIAS4Q8N2W9 510 aaPredicted RBP19.47■□□□□ 0.71
USP15-214ENST00000549415 MSH5O43196 834 aa19.24■□□□□ 0.67
USP15-214ENST00000549415 POTEDQ86YR6 584 aa18.29■□□□□ 0.52
USP15-214ENST00000549415 MAPK8IP2Q13387 824 aaPredicted RBP17.97■□□□□ 0.47
USP15-214ENST00000549415 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
USP15-214ENST00000549415 PPP4R3CPQ6ZMV5 832 aa17.84■□□□□ 0.45
USP15-214ENST00000549415 DMRT2Q9Y5R5 561 aa17.74■□□□□ 0.43
USP15-214ENST00000549415 CNKSR2Q8WXI2 1034 aa17.4■□□□□ 0.38
USP15-214ENST00000549415 HOXD11P31277 338 aaPredicted RBP17.21■□□□□ 0.35
USP15-214ENST00000549415 NCBP3Q53F19 620 aaKnown RBP17.2■□□□□ 0.34
USP15-214ENST00000549415 RNF216Q9NWF9 866 aaPredicted RBP17.16■□□□□ 0.34
USP15-214ENST00000549415 NPM3O75607 178 aaKnown RBP17.02■□□□□ 0.32
USP15-214ENST00000549415 DCAF8L1A6NGE4 600 aa17.01■□□□□ 0.31
USP15-214ENST00000549415 KCNA4P22459 653 aa17.01■□□□□ 0.31
USP15-214ENST00000549415 DNAJC5BQ9UF47 199 aa16.51■□□□□ 0.23
USP15-214ENST00000549415 RNF39Q9H2S5 420 aa16.49■□□□□ 0.23
USP15-214ENST00000549415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.4■□□□□ 0.22
USP15-214ENST00000549415 CACNB1Q02641 598 aaPredicted RBP16.35■□□□□ 0.21
USP15-214ENST00000549415 C1QBPQ07021 282 aaKnown RBP16.23■□□□□ 0.19
USP15-214ENST00000549415 SLC4A2P04920 1241 aa16.19■□□□□ 0.18
USP15-214ENST00000549415 U3KPZ7 1027 aaPredicted RBP16.13■□□□□ 0.17
USP15-214ENST00000549415 SLC4A1APQ9BWU0 796 aaKnown RBP16.09■□□□□ 0.17
USP15-214ENST00000549415 SPINK5Q9NQ38 1064 aaPredicted RBP15.81■□□□□ 0.12
USP15-214ENST00000549415 CAPN15O75808 1086 aa15.73■□□□□ 0.11
USP15-214ENST00000549415 FOXD4L1Q9NU39 408 aa15.72■□□□□ 0.11
USP15-214ENST00000549415 MYCNP04198 464 aaPredicted RBP15.69■□□□□ 0.1
USP15-214ENST00000549415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.68■□□□□ 0.1
USP15-214ENST00000549415 HNRNPUL2Q1KMD3 747 aaKnown RBP15.68■□□□□ 0.1
USP15-214ENST00000549415 ZBTB22O15209 634 aa15.67■□□□□ 0.1
USP15-214ENST00000549415 SAMD1Q6SPF0 538 aaPredicted RBP15.63■□□□□ 0.09
USP15-214ENST00000549415 APLP2Q06481 763 aa15.6■□□□□ 0.09
USP15-214ENST00000549415 TRHP20396 242 aaPredicted RBP15.57■□□□□ 0.08
USP15-214ENST00000549415 DSG3P32926 999 aa15.56■□□□□ 0.08
USP15-214ENST00000549415 ZNF219Q9P2Y4 722 aaPredicted RBP15.5■□□□□ 0.07
USP15-214ENST00000549415 ABCB7O75027 752 aa15.43■□□□□ 0.06
USP15-214ENST00000549415 ATF5Q9Y2D1 282 aaPredicted RBP15.38■□□□□ 0.05
USP15-214ENST00000549415 NISCHQ9Y2I1 1504 aa15.35■□□□□ 0.05
USP15-214ENST00000549415 POLA2Q14181 598 aa15.22■□□□□ 0.03
USP15-214ENST00000549415 CSRNP3Q8WYN3 585 aa15.22■□□□□ 0.03
USP15-214ENST00000549415 EHMT2Q96KQ7 1210 aa15.22■□□□□ 0.03
USP15-214ENST00000549415 ATXN8OSP0DMR3 200 aa15.16■□□□□ 0.02
USP15-214ENST00000549415 ZBTB12Q9Y330 459 aaPredicted RBP14.86□□□□□ -0.03
USP15-214ENST00000549415 RBM42Q9BTD8 480 aaKnown RBP14.78□□□□□ -0.04
USP15-214ENST00000549415 OSCARQ8IYS5 282 aa14.74□□□□□ -0.05
USP15-214ENST00000549415 MKRN4PQ13434 485 aaPredicted RBP14.68□□□□□ -0.06
USP15-214ENST00000549415 FBLN2P98095 1184 aa14.67□□□□□ -0.06
USP15-214ENST00000549415 AKT1S1Q96B36 256 aa14.53□□□□□ -0.08
USP15-214ENST00000549415 SPDYE2BA6NHP3 402 aa14.47□□□□□ -0.09
USP15-214ENST00000549415 SPDYE6P0CI01 402 aa14.47□□□□□ -0.09
USP15-214ENST00000549415 SPDYE2Q495Y8 402 aa14.47□□□□□ -0.09
USP15-214ENST00000549415 REM2Q8IYK8 340 aaPredicted RBP14.43□□□□□ -0.1
USP15-214ENST00000549415 POTEHQ6S545 545 aa14.38□□□□□ -0.11
USP15-214ENST00000549415 CHRDL2Q6WN34 429 aa14.37□□□□□ -0.11
USP15-214ENST00000549415 ZNF692Q9BU19 519 aaPredicted RBP14.37□□□□□ -0.11
USP15-214ENST00000549415 SSUH2Q9Y2M2 353 aa14.34□□□□□ -0.11
USP15-214ENST00000549415 PITPNM1O00562 1244 aa14.29□□□□□ -0.12
USP15-214ENST00000549415 PABPN1Q86U42 306 aaKnown RBP eCLIP14.18□□□□□ -0.14
USP15-214ENST00000549415 SPDYE1Q8NFV5 336 aaPredicted RBP14.13□□□□□ -0.15
USP15-214ENST00000549415 CLEC11AQ9Y240 323 aa14.13□□□□□ -0.15
USP15-214ENST00000549415 SPDYE4A6NLX3 237 aa14.12□□□□□ -0.15
USP15-214ENST00000549415 PIP4P2Q8N4L2 257 aa14.12□□□□□ -0.15
USP15-214ENST00000549415 FXR2P51116 673 aaKnown RBP eCLIP14.08□□□□□ -0.16
USP15-214ENST00000549415 ABCC9O60706 1549 aa13.99□□□□□ -0.17
USP15-214ENST00000549415 PRR29P0C7W0 189 aa13.92□□□□□ -0.18
USP15-214ENST00000549415 PRKAR2AP13861 404 aaKnown RBP13.91□□□□□ -0.18
USP15-214ENST00000549415 CHADLQ6NUI6 762 aa13.86□□□□□ -0.19
USP15-214ENST00000549415 PROM2Q8N271 834 aa13.83□□□□□ -0.2
USP15-214ENST00000549415 CCDC180Q9P1Z9 1646 aa13.82□□□□□ -0.2
USP15-214ENST00000549415 STAG3Q9UJ98 1225 aa13.8□□□□□ -0.2
USP15-214ENST00000549415 FKBP8Q14318 412 aa13.78□□□□□ -0.2
USP15-214ENST00000549415 HAX1O00165 279 aa13.76□□□□□ -0.21
USP15-214ENST00000549415 CREBZFQ9NS37 354 aa13.69□□□□□ -0.22
USP15-214ENST00000549415 EVX2Q03828 476 aa13.68□□□□□ -0.22
USP15-214ENST00000549415 FARP1Q9Y4F1 1045 aaPredicted RBP13.65□□□□□ -0.22
USP15-214ENST00000549415 SP7Q8TDD2 431 aaPredicted RBP13.63□□□□□ -0.23
USP15-214ENST00000549415 C19orf67A6NJJ6 358 aa13.61□□□□□ -0.23
USP15-214ENST00000549415 MNX1P50219 401 aaPredicted RBP13.5□□□□□ -0.25
USP15-214ENST00000549415 CD44P16070 742 aaKnown RBP13.48□□□□□ -0.25
USP15-214ENST00000549415 MIER1Q8N108 512 aa13.42□□□□□ -0.26
USP15-214ENST00000549415 NPM1P06748 294 aaKnown RBP eCLIP13.38□□□□□ -0.27
USP15-214ENST00000549415 PLCD3Q8N3E9 789 aa13.35□□□□□ -0.27
USP15-214ENST00000549415 ZRANB1Q9UGI0 708 aa13.35□□□□□ -0.27
USP15-214ENST00000549415 GABBR2O75899 941 aa13.34□□□□□ -0.27
USP15-214ENST00000549415 PLEKHG5O94827 1062 aa13.32□□□□□ -0.28
USP15-214ENST00000549415 FBXO3Q9UK99 471 aa13.32□□□□□ -0.28
USP15-214ENST00000549415 ZNF579Q8NAF0 562 aaKnown RBP13.28□□□□□ -0.28
USP15-214ENST00000549415 PAK3O75914 559 aaPredicted RBP13.25□□□□□ -0.29
USP15-214ENST00000549415 PHF12Q96QT6 1004 aa13.23□□□□□ -0.29
USP15-214ENST00000549415 RB1CC1Q8TDY2 1594 aa13.21□□□□□ -0.29
USP15-214ENST00000549415 VASPP50552 380 aaPredicted RBP13.21□□□□□ -0.29
USP15-214ENST00000549415 TSPYL2Q9H2G4 693 aaPredicted RBP13.21□□□□□ -0.29
USP15-214ENST00000549415 RASEFQ8IZ41 740 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms