RNA–Protein interactions for RNA: ENST00000549021.5

TGFBR1-206, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2

Gene TGFBR1, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-206ENST00000549021 TNIKQ9UKE5 1360 aa10.53□□□□□ -0.72
TGFBR1-206ENST00000549021 DOK7Q18PE1 504 aa10.53□□□□□ -0.72
TGFBR1-206ENST00000549021 PTCD2Q8WV60 388 aaKnown RBP10.53□□□□□ -0.72
TGFBR1-206ENST00000549021 ZSWIM6Q9HCJ5 1215 aa10.53□□□□□ -0.72
TGFBR1-206ENST00000549021 CUL7Q14999 1698 aa10.53□□□□□ -0.72
TGFBR1-206ENST00000549021 IGF1RP08069 1367 aa10.52□□□□□ -0.72
TGFBR1-206ENST00000549021 ARIH1Q9Y4X5 557 aaPredicted RBP10.52□□□□□ -0.73
TGFBR1-206ENST00000549021 RAPGEF2Q9Y4G8 1499 aa10.52□□□□□ -0.73
TGFBR1-206ENST00000549021 OXER1Q8TDS5 423 aa10.5□□□□□ -0.73
TGFBR1-206ENST00000549021 IFT140Q96RY7 1462 aa10.49□□□□□ -0.73
TGFBR1-206ENST00000549021 E2F4Q16254 413 aa10.49□□□□□ -0.73
TGFBR1-206ENST00000549021 LCE2DQ5TA82 110 aaPredicted RBP10.49□□□□□ -0.73
TGFBR1-206ENST00000549021 GPR153Q6NV75 609 aa10.49□□□□□ -0.73
TGFBR1-206ENST00000549021 EMILIN3Q9NT22 766 aa10.49□□□□□ -0.73
TGFBR1-206ENST00000549021 GAPVD1Q14C86 1478 aa10.49□□□□□ -0.73
TGFBR1-206ENST00000549021 UBTFP17480 764 aaKnown RBP10.48□□□□□ -0.73
TGFBR1-206ENST00000549021 KDM4FA0A1W2PPD8 638 aa10.47□□□□□ -0.73
TGFBR1-206ENST00000549021 CARMIL1Q5VZK9 1371 aa10.46□□□□□ -0.74
TGFBR1-206ENST00000549021 TDRD9Q8NDG6 1382 aaKnown RBP10.46□□□□□ -0.74
TGFBR1-206ENST00000549021 CTTNBP2Q8WZ74 1663 aa10.45□□□□□ -0.74
TGFBR1-206ENST00000549021 CEP162Q5TB80 1403 aa10.45□□□□□ -0.74
TGFBR1-206ENST00000549021 ST18O60284 1047 aa10.45□□□□□ -0.74
TGFBR1-206ENST00000549021 HOXB1P14653 301 aaPredicted RBP10.45□□□□□ -0.74
TGFBR1-206ENST00000549021 KCNV2Q8TDN2 545 aa10.45□□□□□ -0.74
TGFBR1-206ENST00000549021 EIF4G3O43432 1585 aaKnown RBP10.44□□□□□ -0.74
TGFBR1-206ENST00000549021 RIMBP2O15034 1052 aa10.44□□□□□ -0.74
TGFBR1-206ENST00000549021 PCDHGA4Q9Y5G9 962 aa10.44□□□□□ -0.74
TGFBR1-206ENST00000549021 ZNF608Q9ULD9 1512 aaPredicted RBP10.42□□□□□ -0.74
TGFBR1-206ENST00000549021 AQRO60306 1485 aaKnown RBP eCLIP10.42□□□□□ -0.74
TGFBR1-206ENST00000549021 GRIN2BQ13224 1484 aa10.42□□□□□ -0.74
TGFBR1-206ENST00000549021 TBC1D12O60347 775 aa10.41□□□□□ -0.74
TGFBR1-206ENST00000549021 ZNF710Q8N1W2 664 aa10.41□□□□□ -0.74
TGFBR1-206ENST00000549021 ANO8Q9HCE9 1232 aaPredicted RBP10.41□□□□□ -0.74
TGFBR1-206ENST00000549021 ADAMTS12P58397 1594 aa10.4□□□□□ -0.74
TGFBR1-206ENST00000549021 TULP1O00294 542 aaPredicted RBP10.4□□□□□ -0.74
TGFBR1-206ENST00000549021 ARSIQ5FYB1 569 aa10.4□□□□□ -0.74
TGFBR1-206ENST00000549021 ARHGEF1Q92888 912 aaKnown RBP10.4□□□□□ -0.74
TGFBR1-206ENST00000549021 FAM163AQ96GL9 167 aaPredicted RBP10.4□□□□□ -0.74
TGFBR1-206ENST00000549021 CLIP1P30622 1438 aa10.38□□□□□ -0.75
TGFBR1-206ENST00000549021 KHSRPQ92945 711 aaKnown RBP eCLIP10.37□□□□□ -0.751e-6■■□□□ 12
TGFBR1-206ENST00000549021 FHAD1B1AJZ9 1412 aa10.36□□□□□ -0.75
TGFBR1-206ENST00000549021 UPF1Q92900 1129 aaKnown RBP eCLIP10.36□□□□□ -0.75
TGFBR1-206ENST00000549021 DPYSL4O14531 572 aa10.35□□□□□ -0.75
TGFBR1-206ENST00000549021 MAP3K9P80192 1104 aa10.35□□□□□ -0.75
TGFBR1-206ENST00000549021 PDIA6Q15084 440 aa10.35□□□□□ -0.75
TGFBR1-206ENST00000549021 LMOD2Q6P5Q4 547 aa10.34□□□□□ -0.75
TGFBR1-206ENST00000549021 MAGI1Q96QZ7 1491 aaPredicted RBP10.34□□□□□ -0.75
TGFBR1-206ENST00000549021 SPDYE16A6NNV3 312 aaPredicted RBP10.33□□□□□ -0.76
TGFBR1-206ENST00000549021 EVI5O60447 810 aa10.33□□□□□ -0.76
TGFBR1-206ENST00000549021 NUDT7P0C024 238 aa10.33□□□□□ -0.76
TGFBR1-206ENST00000549021 PTGER2P43116 358 aa10.33□□□□□ -0.76
TGFBR1-206ENST00000549021 SNAPC4Q5SXM2 1469 aa10.32□□□□□ -0.76
TGFBR1-206ENST00000549021 ARHGAP35Q9NRY4 1499 aa10.32□□□□□ -0.76
TGFBR1-206ENST00000549021 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.31□□□□□ -0.76
TGFBR1-206ENST00000549021 VPS8Q8N3P4 1428 aa10.31□□□□□ -0.76
TGFBR1-206ENST00000549021 ARAP1Q96P48 1450 aa10.3□□□□□ -0.76
TGFBR1-206ENST00000549021 EFCAB5A4FU69 1503 aa10.3□□□□□ -0.76
TGFBR1-206ENST00000549021 SYNJ2O15056 1496 aa10.3□□□□□ -0.76
TGFBR1-206ENST00000549021 GRIN2AQ12879 1464 aa10.3□□□□□ -0.76
TGFBR1-206ENST00000549021 ZNF316A6NFI3 1004 aaPredicted RBP10.29□□□□□ -0.76
TGFBR1-206ENST00000549021 SAMD9Q5K651 1589 aa10.29□□□□□ -0.76
TGFBR1-206ENST00000549021 IQGAP2Q13576 1575 aa10.28□□□□□ -0.76
TGFBR1-206ENST00000549021 LHX6Q9UPM6 363 aa10.28□□□□□ -0.76
TGFBR1-206ENST00000549021 CHD1O14646 1710 aa10.27□□□□□ -0.76
TGFBR1-206ENST00000549021 MARVELD3Q96A59 401 aa10.27□□□□□ -0.77
TGFBR1-206ENST00000549021 POTEB3A0JP26 581 aa10.26□□□□□ -0.77
TGFBR1-206ENST00000549021 PSDA5PKW4 1024 aaPredicted RBP10.26□□□□□ -0.77
TGFBR1-206ENST00000549021 RANGAP1P46060 587 aaPredicted RBP10.26□□□□□ -0.77
TGFBR1-206ENST00000549021 EMP3P54852 163 aa10.26□□□□□ -0.77
TGFBR1-206ENST00000549021 POTEBQ6S5H4 581 aa10.26□□□□□ -0.77
TGFBR1-206ENST00000549021 CEP170Q5SW79 1584 aa10.25□□□□□ -0.77
TGFBR1-206ENST00000549021 KIAA0586Q9BVV6 1533 aa10.24□□□□□ -0.77
TGFBR1-206ENST00000549021 FOSBP53539 338 aa10.24□□□□□ -0.77
TGFBR1-206ENST00000549021 JPH4Q96JJ6 628 aa10.24□□□□□ -0.77
TGFBR1-206ENST00000549021 UGGT2Q9NYU1 1516 aa10.23□□□□□ -0.77
TGFBR1-206ENST00000549021 SEMA3EO15041 775 aa10.22□□□□□ -0.77
TGFBR1-206ENST00000549021 PHF14O94880 888 aa10.22□□□□□ -0.77
TGFBR1-206ENST00000549021 POTEGQ6S5H5 508 aa10.22□□□□□ -0.77
TGFBR1-206ENST00000549021 CHMP7Q8WUX9 453 aaPredicted RBP10.22□□□□□ -0.77
TGFBR1-206ENST00000549021 HS3ST6Q96QI5 342 aa10.22□□□□□ -0.77
TGFBR1-206ENST00000549021 ERBB3P21860 1342 aa10.22□□□□□ -0.77
TGFBR1-206ENST00000549021 NUP160Q12769 1436 aa10.22□□□□□ -0.77
TGFBR1-206ENST00000549021 POTEMA6NI47 508 aa10.21□□□□□ -0.77
TGFBR1-206ENST00000549021 TESPA1A2RU30 521 aaPredicted RBP10.2□□□□□ -0.78
TGFBR1-206ENST00000549021 FAM205CA6NFA0 338 aa10.2□□□□□ -0.78
TGFBR1-206ENST00000549021 TRIM26Q12899 539 aaPredicted RBP10.2□□□□□ -0.78
TGFBR1-206ENST00000549021 SMYD5Q6GMV2 418 aa10.2□□□□□ -0.78
TGFBR1-206ENST00000549021 ZNF687Q8N1G0 1237 aa10.2□□□□□ -0.78
TGFBR1-206ENST00000549021 PCDHGA10Q9Y5H3 936 aa10.2□□□□□ -0.78
TGFBR1-206ENST00000549021 LRRIQ1Q96JM4 1722 aa10.19□□□□□ -0.78
TGFBR1-206ENST00000549021 VARS2Q5ST30 1063 aaKnown RBP10.19□□□□□ -0.78
TGFBR1-206ENST00000549021 CFAP43Q8NDM7 1665 aa10.18□□□□□ -0.78
TGFBR1-206ENST00000549021 PCF11O94913 1555 aaKnown RBP10.18□□□□□ -0.78
TGFBR1-206ENST00000549021 MAP3K1Q13233 1512 aa10.18□□□□□ -0.78
TGFBR1-206ENST00000549021 FHOD3Q2V2M9 1422 aa10.18□□□□□ -0.78
TGFBR1-206ENST00000549021 EPAS1Q99814 870 aa10.18□□□□□ -0.78
TGFBR1-206ENST00000549021 KIAA0556O60303 1618 aa10.18□□□□□ -0.78
TGFBR1-206ENST00000549021 FMN1Q68DA7 1419 aa10.17□□□□□ -0.78
TGFBR1-206ENST00000549021 MLLT3P42568 568 aaPredicted RBP10.17□□□□□ -0.78
TGFBR1-206ENST00000549021 FYCO1Q9BQS8 1478 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms