RNA–Protein interactions for RNA: ENST00000549021.5

TGFBR1-206, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2

Gene TGFBR1, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-206ENST00000549021 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
TGFBR1-206ENST00000549021 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
TGFBR1-206ENST00000549021 PHF23Q9BUL5 403 aaPredicted RBP19.87■□□□□ 0.77
TGFBR1-206ENST00000549021 SENP3Q9H4L4 574 aaPredicted RBP19.6■□□□□ 0.73
TGFBR1-206ENST00000549021 PLPPR3Q6T4P5 718 aa18.28■□□□□ 0.52
TGFBR1-206ENST00000549021 FOXD1Q16676 465 aa18.21■□□□□ 0.51
TGFBR1-206ENST00000549021 PPP6R1Q9UPN7 881 aa17.52■□□□□ 0.4
TGFBR1-206ENST00000549021 ADRA2BP18089 450 aa17.44■□□□□ 0.38
TGFBR1-206ENST00000549021 PIAS4Q8N2W9 510 aaPredicted RBP17.08■□□□□ 0.32
TGFBR1-206ENST00000549021 MSH5O43196 834 aa16.79■□□□□ 0.28
TGFBR1-206ENST00000549021 PPP4R3CPQ6ZMV5 832 aa16.1■□□□□ 0.17
TGFBR1-206ENST00000549021 SCAF1Q9H7N4 1312 aaKnown RBP15.96■□□□□ 0.15
TGFBR1-206ENST00000549021 MAPK8IP2Q13387 824 aaPredicted RBP15.83■□□□□ 0.12
TGFBR1-206ENST00000549021 KCNA4P22459 653 aa15.68■□□□□ 0.1
TGFBR1-206ENST00000549021 CNKSR2Q8WXI2 1034 aa15.68■□□□□ 0.1
TGFBR1-206ENST00000549021 DMRT2Q9Y5R5 561 aa15.68■□□□□ 0.1
TGFBR1-206ENST00000549021 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
TGFBR1-206ENST00000549021 NPM3O75607 178 aaKnown RBP15.45■□□□□ 0.06
TGFBR1-206ENST00000549021 RNF216Q9NWF9 866 aaPredicted RBP15.4■□□□□ 0.06
TGFBR1-206ENST00000549021 HOXD11P31277 338 aaPredicted RBP15.39■□□□□ 0.05
TGFBR1-206ENST00000549021 POTEDQ86YR6 584 aa15.33■□□□□ 0.04
TGFBR1-206ENST00000549021 DNAJC5BQ9UF47 199 aa15.21■□□□□ 0.03
TGFBR1-206ENST00000549021 NISCHQ9Y2I1 1504 aa14.98□□□□□ -0.01
TGFBR1-206ENST00000549021 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
TGFBR1-206ENST00000549021 DCAF8L1A6NGE4 600 aa14.78□□□□□ -0.04
TGFBR1-206ENST00000549021 SLC4A2P04920 1241 aa14.63□□□□□ -0.07
TGFBR1-206ENST00000549021 EHMT2Q96KQ7 1210 aa14.54□□□□□ -0.08
TGFBR1-206ENST00000549021 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.49□□□□□ -0.09
TGFBR1-206ENST00000549021 ZBTB22O15209 634 aa14.46□□□□□ -0.09
TGFBR1-206ENST00000549021 FOXD4L1Q9NU39 408 aa14.44□□□□□ -0.1
TGFBR1-206ENST00000549021 RNF39Q9H2S5 420 aa14.42□□□□□ -0.1
TGFBR1-206ENST00000549021 CSRNP3Q8WYN3 585 aa14.36□□□□□ -0.11
TGFBR1-206ENST00000549021 U3KPZ7 1027 aaPredicted RBP14.35□□□□□ -0.11
TGFBR1-206ENST00000549021 MYCNP04198 464 aaPredicted RBP14.26□□□□□ -0.13
TGFBR1-206ENST00000549021 C1QBPQ07021 282 aaKnown RBP14.23□□□□□ -0.13
TGFBR1-206ENST00000549021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.14□□□□□ -0.15
TGFBR1-206ENST00000549021 HNRNPUL2Q1KMD3 747 aaKnown RBP14.14□□□□□ -0.15
TGFBR1-206ENST00000549021 SAMD1Q6SPF0 538 aaPredicted RBP14.08□□□□□ -0.16
TGFBR1-206ENST00000549021 ATXN8OSP0DMR3 200 aa14.02□□□□□ -0.17
TGFBR1-206ENST00000549021 APLP2Q06481 763 aa13.97□□□□□ -0.17
TGFBR1-206ENST00000549021 CACNB1Q02641 598 aaPredicted RBP13.94□□□□□ -0.18
TGFBR1-206ENST00000549021 SPINK5Q9NQ38 1064 aaPredicted RBP13.92□□□□□ -0.18
TGFBR1-206ENST00000549021 ATF5Q9Y2D1 282 aaPredicted RBP13.9□□□□□ -0.18
TGFBR1-206ENST00000549021 ZNF219Q9P2Y4 722 aaPredicted RBP13.8□□□□□ -0.2
TGFBR1-206ENST00000549021 CAPN15O75808 1086 aa13.79□□□□□ -0.2
TGFBR1-206ENST00000549021 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
TGFBR1-206ENST00000549021 DSG3P32926 999 aa13.7□□□□□ -0.22
TGFBR1-206ENST00000549021 POLA2Q14181 598 aa13.56□□□□□ -0.24
TGFBR1-206ENST00000549021 ABCB7O75027 752 aa13.52□□□□□ -0.25
TGFBR1-206ENST00000549021 ZBTB12Q9Y330 459 aaPredicted RBP13.35□□□□□ -0.27
TGFBR1-206ENST00000549021 MKRN4PQ13434 485 aaPredicted RBP13.31□□□□□ -0.28
TGFBR1-206ENST00000549021 FBLN2P98095 1184 aa13.24□□□□□ -0.29
TGFBR1-206ENST00000549021 CCDC180Q9P1Z9 1646 aa13.17□□□□□ -0.3
TGFBR1-206ENST00000549021 OSCARQ8IYS5 282 aa13.07□□□□□ -0.32
TGFBR1-206ENST00000549021 SPDYE2BA6NHP3 402 aa13.01□□□□□ -0.33
TGFBR1-206ENST00000549021 SPDYE6P0CI01 402 aa13.01□□□□□ -0.33
TGFBR1-206ENST00000549021 SPDYE2Q495Y8 402 aa13.01□□□□□ -0.33
TGFBR1-206ENST00000549021 RBM42Q9BTD8 480 aaKnown RBP13□□□□□ -0.33
TGFBR1-206ENST00000549021 SSUH2Q9Y2M2 353 aa12.95□□□□□ -0.34
TGFBR1-206ENST00000549021 SPDYE4A6NLX3 237 aa12.93□□□□□ -0.34
TGFBR1-206ENST00000549021 ZNF692Q9BU19 519 aaPredicted RBP12.89□□□□□ -0.35
TGFBR1-206ENST00000549021 FKBP8Q14318 412 aa12.88□□□□□ -0.35
TGFBR1-206ENST00000549021 AKT1S1Q96B36 256 aa12.88□□□□□ -0.35
TGFBR1-206ENST00000549021 PROM2Q8N271 834 aa12.87□□□□□ -0.35
TGFBR1-206ENST00000549021 REM2Q8IYK8 340 aaPredicted RBP12.74□□□□□ -0.37
TGFBR1-206ENST00000549021 PABPN1Q86U42 306 aaKnown RBP eCLIP12.73□□□□□ -0.37
TGFBR1-206ENST00000549021 SPDYE1Q8NFV5 336 aaPredicted RBP12.6□□□□□ -0.39
TGFBR1-206ENST00000549021 AMER1Q5JTC6 1135 aaPredicted RBP12.59□□□□□ -0.39
TGFBR1-206ENST00000549021 PITPNM1O00562 1244 aa12.57□□□□□ -0.4
TGFBR1-206ENST00000549021 ZCCHC6Q5VYS8 1495 aaKnown RBP12.57□□□□□ -0.4
TGFBR1-206ENST00000549021 STAG3Q9UJ98 1225 aa12.55□□□□□ -0.4
TGFBR1-206ENST00000549021 RTN4Q9NQC3 1192 aaKnown RBP12.53□□□□□ -0.4
TGFBR1-206ENST00000549021 CHRDL2Q6WN34 429 aa12.47□□□□□ -0.41
TGFBR1-206ENST00000549021 FBXO3Q9UK99 471 aa12.47□□□□□ -0.41
TGFBR1-206ENST00000549021 CLEC11AQ9Y240 323 aa12.45□□□□□ -0.42
TGFBR1-206ENST00000549021 DCAF1Q9Y4B6 1507 aa12.43□□□□□ -0.42
TGFBR1-206ENST00000549021 FXR2P51116 673 aaKnown RBP eCLIP12.42□□□□□ -0.42
TGFBR1-206ENST00000549021 PRR29P0C7W0 189 aa12.4□□□□□ -0.42
TGFBR1-206ENST00000549021 ABCC9O60706 1549 aa12.34□□□□□ -0.43
TGFBR1-206ENST00000549021 PIP4P2Q8N4L2 257 aa12.33□□□□□ -0.44
TGFBR1-206ENST00000549021 CREBZFQ9NS37 354 aa12.31□□□□□ -0.44
TGFBR1-206ENST00000549021 VASPP50552 380 aaPredicted RBP12.3□□□□□ -0.44
TGFBR1-206ENST00000549021 MYO15BQ96JP2 1530 aa12.3□□□□□ -0.44
TGFBR1-206ENST00000549021 SLC24A1O60721 1099 aa12.27□□□□□ -0.45
TGFBR1-206ENST00000549021 DCAF8L2P0C7V8 631 aa12.26□□□□□ -0.45
TGFBR1-206ENST00000549021 MNX1P50219 401 aaPredicted RBP12.24□□□□□ -0.45
TGFBR1-206ENST00000549021 NACADO15069 1562 aa12.22□□□□□ -0.45
TGFBR1-206ENST00000549021 PRKAR2AP13861 404 aaKnown RBP12.22□□□□□ -0.45
TGFBR1-206ENST00000549021 MIER1Q8N108 512 aa12.22□□□□□ -0.45
TGFBR1-206ENST00000549021 CHADLQ6NUI6 762 aa12.19□□□□□ -0.46
TGFBR1-206ENST00000549021 IFNLR1Q8IU57 520 aaPredicted RBP12.17□□□□□ -0.46
TGFBR1-206ENST00000549021 PLCD3Q8N3E9 789 aa12.16□□□□□ -0.46
TGFBR1-206ENST00000549021 FARP1Q9Y4F1 1045 aaPredicted RBP12.14□□□□□ -0.47
TGFBR1-206ENST00000549021 PLEKHG5O94827 1062 aa12.13□□□□□ -0.47
TGFBR1-206ENST00000549021 RB1CC1Q8TDY2 1594 aa12.12□□□□□ -0.47
TGFBR1-206ENST00000549021 POTEHQ6S545 545 aa12.11□□□□□ -0.47
TGFBR1-206ENST00000549021 ZBTB47Q9UFB7 747 aaPredicted RBP12.11□□□□□ -0.47
TGFBR1-206ENST00000549021 SHROOM4Q9ULL8 1493 aa12.08□□□□□ -0.48
TGFBR1-206ENST00000549021 NPM1P06748 294 aaKnown RBP eCLIP12.04□□□□□ -0.48
TGFBR1-206ENST00000549021 NUBP1P53384 320 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms