RNA–Protein interactions for RNA: ENST00000548916.1

NCKAP1L-205, Transcript of NCK associated protein 1 like, humanhuman

TSL 3

Gene NCKAP1L, Length 708 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-205ENST00000548916 NKX1-1Q15270 411 aaPredicted RBP12.18□□□□□ -0.46
NCKAP1L-205ENST00000548916 UPF1Q92900 1129 aaKnown RBP eCLIP12.18□□□□□ -0.46
NCKAP1L-205ENST00000548916 NRG2O14511 850 aaPredicted RBP12.15□□□□□ -0.46
NCKAP1L-205ENST00000548916 BCAMP50895 628 aa12.15□□□□□ -0.46
NCKAP1L-205ENST00000548916 ZNF787Q6DD87 383 aa12.14□□□□□ -0.47
NCKAP1L-205ENST00000548916 JPH4Q96JJ6 628 aa12.14□□□□□ -0.47
NCKAP1L-205ENST00000548916 RABGEF1Q9UJ41 708 aa12.14□□□□□ -0.47
NCKAP1L-205ENST00000548916 SOWAHBA6NEL2 793 aa12.13□□□□□ -0.47
NCKAP1L-205ENST00000548916 GTPBP6O43824 516 aaPredicted RBP12.13□□□□□ -0.47
NCKAP1L-205ENST00000548916 ZDHHC16Q969W1 377 aa12.13□□□□□ -0.47
NCKAP1L-205ENST00000548916 LAPTM4BQ86VI4 370 aa12.1□□□□□ -0.47
NCKAP1L-205ENST00000548916 ADAM33Q9BZ11 813 aa12.1□□□□□ -0.47
NCKAP1L-205ENST00000548916 PPP1R3GB7ZBB8 358 aa12.08□□□□□ -0.48
NCKAP1L-205ENST00000548916 WBP1LQ9NX94 342 aa12.08□□□□□ -0.48
NCKAP1L-205ENST00000548916 PRKCSHP14314 528 aaPredicted RBP12.05□□□□□ -0.48
NCKAP1L-205ENST00000548916 ZNF775Q96BV0 537 aaPredicted RBP12.05□□□□□ -0.48
NCKAP1L-205ENST00000548916 PRKD2Q9BZL6 878 aa12.04□□□□□ -0.48
NCKAP1L-205ENST00000548916 PROX2Q3B8N5 592 aa12.03□□□□□ -0.48
NCKAP1L-205ENST00000548916 ZFRQ96KR1 1074 aaKnown RBP12.03□□□□□ -0.48
NCKAP1L-205ENST00000548916 ANO8Q9HCE9 1232 aaPredicted RBP12.03□□□□□ -0.48
NCKAP1L-205ENST00000548916 RYDENQ9NUL5 291 aaKnown RBP12.03□□□□□ -0.48
NCKAP1L-205ENST00000548916 EVI5O60447 810 aa11.99□□□□□ -0.49
NCKAP1L-205ENST00000548916 V9GY48 417 aaPredicted RBP11.97□□□□□ -0.49
NCKAP1L-205ENST00000548916 PPP1R15BQ5SWA1 713 aa11.96□□□□□ -0.49
NCKAP1L-205ENST00000548916 TSR3Q9UJK0 312 aaKnown RBP11.96□□□□□ -0.49
NCKAP1L-205ENST00000548916 TPRNQ4KMQ1 711 aa11.94□□□□□ -0.5
NCKAP1L-205ENST00000548916 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.94□□□□□ -0.5
NCKAP1L-205ENST00000548916 KIAA1468Q9P260 1216 aa11.94□□□□□ -0.5
NCKAP1L-205ENST00000548916 HPS5Q9UPZ3 1129 aa11.94□□□□□ -0.5
NCKAP1L-205ENST00000548916 COL9A1P20849 921 aa11.92□□□□□ -0.5
NCKAP1L-205ENST00000548916 NBR1Q14596 966 aa11.92□□□□□ -0.5
NCKAP1L-205ENST00000548916 LRCH3Q96II8 777 aa11.92□□□□□ -0.5
NCKAP1L-205ENST00000548916 PDZRN3Q9UPQ7 1066 aa11.92□□□□□ -0.5
NCKAP1L-205ENST00000548916 SEPT9Q9UHD8 586 aaPredicted RBP11.9□□□□□ -0.5
NCKAP1L-205ENST00000548916 ONECUT3O60422 494 aaPredicted RBP11.89□□□□□ -0.51
NCKAP1L-205ENST00000548916 FAM98CQ17RN3 349 aaKnown RBP11.89□□□□□ -0.51
NCKAP1L-205ENST00000548916 CRISPLD2Q9H0B8 497 aa11.89□□□□□ -0.51
NCKAP1L-205ENST00000548916 FBXW7Q969H0 707 aa11.88□□□□□ -0.51
NCKAP1L-205ENST00000548916 PCDHGA10Q9Y5H3 936 aa11.86□□□□□ -0.51
NCKAP1L-205ENST00000548916 MAP3K9P80192 1104 aa11.85□□□□□ -0.51
NCKAP1L-205ENST00000548916 PPP1R18Q6NYC8 613 aa11.84□□□□□ -0.51
NCKAP1L-205ENST00000548916 TYW1BQ6NUM6 668 aa11.83□□□□□ -0.52
NCKAP1L-205ENST00000548916 PPP4CP60510 307 aa11.81□□□□□ -0.52
NCKAP1L-205ENST00000548916 TJAP1Q5JTD0 557 aa11.81□□□□□ -0.52
NCKAP1L-205ENST00000548916 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.8□□□□□ -0.52
NCKAP1L-205ENST00000548916 TRIM6-TRIM34B2RNG4 842 aa11.79□□□□□ -0.52
NCKAP1L-205ENST00000548916 PDE4AP27815 886 aa11.79□□□□□ -0.52
NCKAP1L-205ENST00000548916 IL21Q9HBE4 155 aa11.79□□□□□ -0.52
NCKAP1L-205ENST00000548916 PHF14O94880 888 aa11.77□□□□□ -0.53
NCKAP1L-205ENST00000548916 CADPS2Q86UW7 1296 aa11.75□□□□□ -0.53
NCKAP1L-205ENST00000548916 MTRQ99707 1265 aa11.75□□□□□ -0.53
NCKAP1L-205ENST00000548916 P3H3Q8IVL6 736 aa11.73□□□□□ -0.53
NCKAP1L-205ENST00000548916 GGCXP38435 758 aa11.72□□□□□ -0.53
NCKAP1L-205ENST00000548916 PKDCCQ504Y2 493 aa11.72□□□□□ -0.53
NCKAP1L-205ENST00000548916 C6orf132Q5T0Z8 1188 aa11.72□□□□□ -0.53
NCKAP1L-205ENST00000548916 NCKAP5LQ9HCH0 1330 aa11.71□□□□□ -0.53
NCKAP1L-205ENST00000548916 WDR70Q9NW82 654 aa11.7□□□□□ -0.54
NCKAP1L-205ENST00000548916 TREML4Q6UXN2 200 aa11.69□□□□□ -0.54
NCKAP1L-205ENST00000548916 DDX27Q96GQ7 796 aaKnown RBP11.69□□□□□ -0.54
NCKAP1L-205ENST00000548916 EPAS1Q99814 870 aa11.68□□□□□ -0.54
NCKAP1L-205ENST00000548916 PACS2Q86VP3 889 aa11.67□□□□□ -0.54
NCKAP1L-205ENST00000548916 MYT1Q01538 1121 aa11.66□□□□□ -0.54
NCKAP1L-205ENST00000548916 DGAT1O75907 488 aa11.65□□□□□ -0.54
NCKAP1L-205ENST00000548916 LARP6Q9BRS8 491 aaKnown RBP11.65□□□□□ -0.54
NCKAP1L-205ENST00000548916 KCNV2Q8TDN2 545 aa11.64□□□□□ -0.55
NCKAP1L-205ENST00000548916 ZNF516Q92618 1163 aa11.64□□□□□ -0.55
NCKAP1L-205ENST00000548916 POTECB2RU33 542 aa11.62□□□□□ -0.55
NCKAP1L-205ENST00000548916 SAMD7Q7Z3H4 446 aa11.62□□□□□ -0.55
NCKAP1L-205ENST00000548916 TMUB1Q9BVT8 246 aa11.61□□□□□ -0.55
NCKAP1L-205ENST00000548916 EMILIN3Q9NT22 766 aa11.61□□□□□ -0.55
NCKAP1L-205ENST00000548916 LCE2AQ5TA79 106 aaPredicted RBP11.6□□□□□ -0.55
NCKAP1L-205ENST00000548916 STK17AQ9UEE5 414 aa11.6□□□□□ -0.55
NCKAP1L-205ENST00000548916 TRIM67Q6ZTA4 783 aa11.58□□□□□ -0.56
NCKAP1L-205ENST00000548916 NKX2-3Q8TAU0 364 aa11.57□□□□□ -0.56
NCKAP1L-205ENST00000548916 RBM33Q96EV2 1170 aaKnown RBP11.57□□□□□ -0.56
NCKAP1L-205ENST00000548916 TSKSQ9UJT2 592 aa11.56□□□□□ -0.56
NCKAP1L-205ENST00000548916 MFSD10Q14728 455 aa11.55□□□□□ -0.56
NCKAP1L-205ENST00000548916 ARHGEF1Q92888 912 aaKnown RBP11.54□□□□□ -0.56
NCKAP1L-205ENST00000548916 RNF40O75150 1001 aa11.53□□□□□ -0.56
NCKAP1L-205ENST00000548916 SLC19A1P41440 591 aa11.53□□□□□ -0.56
NCKAP1L-205ENST00000548916 PRR20EP86478 221 aa11.53□□□□□ -0.56
NCKAP1L-205ENST00000548916 PRR20CP86479 221 aa11.53□□□□□ -0.56
NCKAP1L-205ENST00000548916 PRR20DP86480 221 aa11.53□□□□□ -0.56
NCKAP1L-205ENST00000548916 PRR20BP86481 221 aa11.53□□□□□ -0.56
NCKAP1L-205ENST00000548916 PRR20AP86496 221 aa11.53□□□□□ -0.56
NCKAP1L-205ENST00000548916 FAM187AA6NFU0 413 aa11.52□□□□□ -0.57
NCKAP1L-205ENST00000548916 E2F4Q16254 413 aa11.52□□□□□ -0.57
NCKAP1L-205ENST00000548916 NECTIN2Q92692 538 aa11.52□□□□□ -0.57
NCKAP1L-205ENST00000548916 HDGFP51858 240 aaKnown RBP11.51□□□□□ -0.57
NCKAP1L-205ENST00000548916 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.51□□□□□ -0.57
NCKAP1L-205ENST00000548916 WFS1O76024 890 aa11.5□□□□□ -0.57
NCKAP1L-205ENST00000548916 APLP1P51693 650 aa11.5□□□□□ -0.57
NCKAP1L-205ENST00000548916 INSM1Q01101 510 aaPredicted RBP11.5□□□□□ -0.57
NCKAP1L-205ENST00000548916 SMAPO00193 183 aa11.49□□□□□ -0.57
NCKAP1L-205ENST00000548916 ABCC9O60706 1549 aa11.49□□□□□ -0.57
NCKAP1L-205ENST00000548916 COPS2P61201 443 aa11.48□□□□□ -0.57
NCKAP1L-205ENST00000548916 ZNF598Q86UK7 904 aaKnown RBP11.47□□□□□ -0.57
NCKAP1L-205ENST00000548916 NBPF26B4DH59 902 aa11.46□□□□□ -0.57
NCKAP1L-205ENST00000548916 SPRYD7Q5W111 196 aa11.46□□□□□ -0.57
NCKAP1L-205ENST00000548916 LMOD2Q6P5Q4 547 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms