RNA–Protein interactions for RNA: ENST00000544665.7

ITGAM-202, Transcript of integrin subunit alpha M, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ITGAM, Length 4,718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-202ENST00000544665 CRBNQ96SW2 442 aa18.19■□□□□ 0.5
ITGAM-202ENST00000544665 BCL2L13Q9BXK5 485 aa18.18■□□□□ 0.5
ITGAM-202ENST00000544665 NESP48681 1621 aa18.18■□□□□ 0.5
ITGAM-202ENST00000544665 PDE4AP27815 886 aa18.18■□□□□ 0.5
ITGAM-202ENST00000544665 APAF1O14727 1248 aa18.17■□□□□ 0.5
ITGAM-202ENST00000544665 CALD1Q05682 793 aaKnown RBP18.17■□□□□ 0.5
ITGAM-202ENST00000544665 MFAP1P55081 439 aaKnown RBP18.15■□□□□ 0.5
ITGAM-202ENST00000544665 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.15■□□□□ 0.5
ITGAM-202ENST00000544665 KCNJ4P48050 445 aa18.14■□□□□ 0.49
ITGAM-202ENST00000544665 NAP1L5Q96NT1 182 aaPredicted RBP18.14■□□□□ 0.49
ITGAM-202ENST00000544665 NBPF8Q3BBV2 869 aa18.13■□□□□ 0.49
ITGAM-202ENST00000544665 PLCB2Q00722 1185 aa18.13■□□□□ 0.49
ITGAM-202ENST00000544665 TIAM1Q13009 1591 aa18.12■□□□□ 0.49
ITGAM-202ENST00000544665 CENPQQ7L2Z9 268 aaPredicted RBP18.12■□□□□ 0.49
ITGAM-202ENST00000544665 GZF1Q9H116 711 aaPredicted RBP18.12■□□□□ 0.49
ITGAM-202ENST00000544665 PRDM2Q13029 1718 aa18.11■□□□□ 0.49
ITGAM-202ENST00000544665 E9PSI1 815 aa18.11■□□□□ 0.49
ITGAM-202ENST00000544665 DNTTIP2Q5QJE6 756 aaKnown RBP18.11■□□□□ 0.49
ITGAM-202ENST00000544665 PAK3O75914 559 aaPredicted RBP18.1■□□□□ 0.49
ITGAM-202ENST00000544665 SLC4A3P48751 1232 aa18.1■□□□□ 0.49
ITGAM-202ENST00000544665 POLA1P09884 1462 aaPredicted RBP18.1■□□□□ 0.49
ITGAM-202ENST00000544665 COG6Q9Y2V7 657 aa18.1■□□□□ 0.49
ITGAM-202ENST00000544665 HFM1A2PYH4 1435 aa18.1■□□□□ 0.49
ITGAM-202ENST00000544665 FANCIQ9NVI1 1328 aa18.1■□□□□ 0.49
ITGAM-202ENST00000544665 L1TD1Q5T7N2 865 aaKnown RBP18.1■□□□□ 0.49
ITGAM-202ENST00000544665 NUTM2FA1L443 756 aa18.09■□□□□ 0.49
ITGAM-202ENST00000544665 GRIN2BQ13224 1484 aa18.09■□□□□ 0.49
ITGAM-202ENST00000544665 TOPBP1Q92547 1522 aa18.09■□□□□ 0.49
ITGAM-202ENST00000544665 EFCAB5A4FU69 1503 aa18.08■□□□□ 0.49
ITGAM-202ENST00000544665 FGD1P98174 961 aa18.08■□□□□ 0.49
ITGAM-202ENST00000544665 CGNL1Q0VF96 1302 aa18.08■□□□□ 0.48
ITGAM-202ENST00000544665 HMGXB3Q12766 1538 aa18.08■□□□□ 0.48
ITGAM-202ENST00000544665 VGFO15240 615 aaPredicted RBP18.07■□□□□ 0.48
ITGAM-202ENST00000544665 MCCP23508 829 aa18.07■□□□□ 0.48
ITGAM-202ENST00000544665 TAOK2Q9UL54 1235 aa18.07■□□□□ 0.48
ITGAM-202ENST00000544665 ELL2O00472 640 aaPredicted RBP18.07■□□□□ 0.48
ITGAM-202ENST00000544665 ZRSR1Q15695 479 aaKnown RBP18.07■□□□□ 0.48
ITGAM-202ENST00000544665 FAM161AQ3B820 660 aa18.07■□□□□ 0.48
ITGAM-202ENST00000544665 WDR97A6NE52 1622 aa18.06■□□□□ 0.48
ITGAM-202ENST00000544665 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
ITGAM-202ENST00000544665 CFAP44Q96MT7 982 aa18.06■□□□□ 0.48
ITGAM-202ENST00000544665 EVC2Q86UK5 1308 aa18.05■□□□□ 0.48
ITGAM-202ENST00000544665 MINK1Q8N4C8 1332 aaPredicted RBP18.04■□□□□ 0.48
ITGAM-202ENST00000544665 MIA2Q96PC5 1412 aa18.04■□□□□ 0.48
ITGAM-202ENST00000544665 CCDC184Q52MB2 194 aa18.04■□□□□ 0.48
ITGAM-202ENST00000544665 NBPF1Q3BBV0 1214 aa18.03■□□□□ 0.48
ITGAM-202ENST00000544665 SLC4A10Q6U841 1118 aa18.03■□□□□ 0.48
ITGAM-202ENST00000544665 GBP4Q96PP9 640 aa18.03■□□□□ 0.48
ITGAM-202ENST00000544665 STK31Q9BXU1 1019 aa18.03■□□□□ 0.48
ITGAM-202ENST00000544665 NAP1L2Q9ULW6 460 aaPredicted RBP18.03■□□□□ 0.48
ITGAM-202ENST00000544665 CDCA7LQ96GN5 454 aa18.02■□□□□ 0.47
ITGAM-202ENST00000544665 AFAP1Q8N556 730 aa18.01■□□□□ 0.47
ITGAM-202ENST00000544665 EHBP1L1Q8N3D4 1523 aa18.01■□□□□ 0.47
ITGAM-202ENST00000544665 PRG4Q92954 1404 aaPredicted RBP18.01■□□□□ 0.47
ITGAM-202ENST00000544665 ZKSCAN2Q63HK3 967 aa18.01■□□□□ 0.47
ITGAM-202ENST00000544665 ADAMTS8Q9UP79 889 aa18.01■□□□□ 0.47
ITGAM-202ENST00000544665 BRD4O60885 1362 aaPredicted RBP18.01■□□□□ 0.47
ITGAM-202ENST00000544665 LMOD3Q0VAK6 560 aa18■□□□□ 0.47
ITGAM-202ENST00000544665 NGDNQ8NEJ9 315 aaKnown RBP17.99■□□□□ 0.47
ITGAM-202ENST00000544665 FOXD4L1Q9NU39 408 aa17.99■□□□□ 0.47
ITGAM-202ENST00000544665 NAIPQ13075 1403 aa17.99■□□□□ 0.47
ITGAM-202ENST00000544665 KIAA1107Q9UPP5 1409 aa17.98■□□□□ 0.47
ITGAM-202ENST00000544665 GOLGA6L4A6NEF3 574 aa17.97■□□□□ 0.47
ITGAM-202ENST00000544665 KIAA1211Q6ZU35 1233 aa17.97■□□□□ 0.47
ITGAM-202ENST00000544665 BICRAQ9NZM4 1560 aa17.97■□□□□ 0.47
ITGAM-202ENST00000544665 AMPHP49418 695 aa17.96■□□□□ 0.47
ITGAM-202ENST00000544665 LTV1Q96GA3 475 aaPredicted RBP17.96■□□□□ 0.47
ITGAM-202ENST00000544665 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.96■□□□□ 0.47
ITGAM-202ENST00000544665 HMMRO75330 724 aa17.96■□□□□ 0.46
ITGAM-202ENST00000544665 CFAP70Q5T0N1 1121 aa17.95■□□□□ 0.46
ITGAM-202ENST00000544665 TMEM132EQ6IEE7 984 aa17.95■□□□□ 0.46
ITGAM-202ENST00000544665 CC2D2AQ9P2K1 1620 aa17.95■□□□□ 0.46
ITGAM-202ENST00000544665 STAC3Q96MF2 364 aa17.94■□□□□ 0.46
ITGAM-202ENST00000544665 TROQ12816 1431 aaPredicted RBP17.94■□□□□ 0.46
ITGAM-202ENST00000544665 USP35Q9P2H5 1018 aa17.94■□□□□ 0.46
ITGAM-202ENST00000544665 C9orf84Q5VXU9 1444 aa17.94■□□□□ 0.46
ITGAM-202ENST00000544665 TRIM6-TRIM34B2RNG4 842 aa17.94■□□□□ 0.46
ITGAM-202ENST00000544665 ANKRD45Q5TZF3 282 aa17.94■□□□□ 0.46
ITGAM-202ENST00000544665 NGEFQ8N5V2 710 aa17.94■□□□□ 0.46
ITGAM-202ENST00000544665 EID1Q9Y6B2 187 aa17.94■□□□□ 0.46
ITGAM-202ENST00000544665 PNISRQ8TF01 805 aaKnown RBP17.93■□□□□ 0.46
ITGAM-202ENST00000544665 RUNDC1Q96C34 613 aa17.93■□□□□ 0.46
ITGAM-202ENST00000544665 MSNP26038 577 aaKnown RBP17.93■□□□□ 0.46
ITGAM-202ENST00000544665 COG3Q96JB2 828 aa17.93■□□□□ 0.46
ITGAM-202ENST00000544665 DAPK1P53355 1430 aa17.93■□□□□ 0.46
ITGAM-202ENST00000544665 AKNAQ7Z591 1439 aa17.92■□□□□ 0.46
ITGAM-202ENST00000544665 DIAPH1O60610 1272 aaKnown RBP17.92■□□□□ 0.46
ITGAM-202ENST00000544665 ARHGAP5Q13017 1502 aa17.92■□□□□ 0.46
ITGAM-202ENST00000544665 GOLGA6L3A6NEY3 463 aa17.92■□□□□ 0.46
ITGAM-202ENST00000544665 RIPK4P57078 832 aa17.92■□□□□ 0.46
ITGAM-202ENST00000544665 CYB5RLQ6IPT4 315 aa17.91■□□□□ 0.46
ITGAM-202ENST00000544665 SYNJ2O15056 1496 aa17.91■□□□□ 0.46
ITGAM-202ENST00000544665 DNMBPQ6XZF7 1577 aa17.91■□□□□ 0.46
ITGAM-202ENST00000544665 PCF11O94913 1555 aaKnown RBP17.91■□□□□ 0.46
ITGAM-202ENST00000544665 CDK13Q14004 1512 aaKnown RBP17.91■□□□□ 0.46
ITGAM-202ENST00000544665 PPP2R1AP30153 589 aa17.91■□□□□ 0.46
ITGAM-202ENST00000544665 DZIP1LQ8IYY4 767 aaKnown RBP17.91■□□□□ 0.46
ITGAM-202ENST00000544665 PANK1Q8TE04 598 aa17.9■□□□□ 0.46
ITGAM-202ENST00000544665 NOL8Q76FK4 1167 aaKnown RBP17.9■□□□□ 0.46
ITGAM-202ENST00000544665 GGNBP2Q9H3C7 697 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms