RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 POLR3GLQ9BT43 218 aa6.49□□□□□ -1.37
LMO3-229ENST00000543721 KIAA1107Q9UPP5 1409 aa6.48□□□□□ -1.37
LMO3-229ENST00000543721 KLHL34Q8N239 644 aa6.48□□□□□ -1.37
LMO3-229ENST00000543721 LRRIQ1Q96JM4 1722 aa6.48□□□□□ -1.37
LMO3-229ENST00000543721 EIF3AQ14152 1382 aaKnown RBP6.48□□□□□ -1.37
LMO3-229ENST00000543721 KDM6BO15054 1643 aa6.48□□□□□ -1.37
LMO3-229ENST00000543721 DAPK1P53355 1430 aa6.48□□□□□ -1.37
LMO3-229ENST00000543721 BCORL1Q5H9F3 1711 aa6.48□□□□□ -1.37
LMO3-229ENST00000543721 ARHGEF12Q9NZN5 1544 aa6.48□□□□□ -1.37
LMO3-229ENST00000543721 RRP9O43818 475 aaKnown RBP6.48□□□□□ -1.37
LMO3-229ENST00000543721 CRBNQ96SW2 442 aa6.47□□□□□ -1.37
LMO3-229ENST00000543721 DNMT1P26358 1616 aaKnown RBP6.47□□□□□ -1.37
LMO3-229ENST00000543721 KDM2BQ8NHM5 1336 aa6.47□□□□□ -1.37
LMO3-229ENST00000543721 FRAT2O75474 233 aaPredicted RBP6.46□□□□□ -1.37
LMO3-229ENST00000543721 PARD3Q8TEW0 1356 aa6.46□□□□□ -1.37
LMO3-229ENST00000543721 CARD11Q9BXL7 1154 aa6.46□□□□□ -1.38
LMO3-229ENST00000543721 GAPVD1Q14C86 1478 aa6.45□□□□□ -1.38
LMO3-229ENST00000543721 BLMP54132 1417 aaPredicted RBP6.45□□□□□ -1.38
LMO3-229ENST00000543721 HSP90AA1P07900 732 aaKnown RBP6.45□□□□□ -1.38
LMO3-229ENST00000543721 SAMD1Q6SPF0 538 aaPredicted RBP6.45□□□□□ -1.38
LMO3-229ENST00000543721 PNNQ9H307 717 aaKnown RBP6.45□□□□□ -1.38
LMO3-229ENST00000543721 ISY1Q9ULR0 285 aaKnown RBP6.45□□□□□ -1.38
LMO3-229ENST00000543721 EPRSP07814 1512 aaKnown RBP6.45□□□□□ -1.38
LMO3-229ENST00000543721 FANCD2Q9BXW9 1451 aa6.45□□□□□ -1.38
LMO3-229ENST00000543721 NESP48681 1621 aa6.45□□□□□ -1.38
LMO3-229ENST00000543721 POLA1P09884 1462 aaPredicted RBP6.45□□□□□ -1.38
LMO3-229ENST00000543721 C8orf34Q49A92 452 aa6.45□□□□□ -1.38
LMO3-229ENST00000543721 E9PCH4 1651 aa6.45□□□□□ -1.38
LMO3-229ENST00000543721 MAGI3Q5TCQ9 1506 aa6.45□□□□□ -1.38
LMO3-229ENST00000543721 ABCC5O15440 1437 aa6.45□□□□□ -1.38
LMO3-229ENST00000543721 CLCN1P35523 988 aa6.44□□□□□ -1.38
LMO3-229ENST00000543721 HSP90AA2PQ14568 343 aaPredicted RBP6.44□□□□□ -1.38
LMO3-229ENST00000543721 TOPBP1Q92547 1522 aa6.44□□□□□ -1.38
LMO3-229ENST00000543721 PZPP20742 1482 aa6.44□□□□□ -1.38
LMO3-229ENST00000543721 MAPK8IP3Q9UPT6 1336 aa6.44□□□□□ -1.38
LMO3-229ENST00000543721 TULP1O00294 542 aaPredicted RBP6.44□□□□□ -1.38
LMO3-229ENST00000543721 SLC4A3P48751 1232 aa6.43□□□□□ -1.38
LMO3-229ENST00000543721 UPF2Q9HAU5 1272 aaKnown RBP6.43□□□□□ -1.38
LMO3-229ENST00000543721 CCDC144AA2RUR9 1427 aa6.43□□□□□ -1.38
LMO3-229ENST00000543721 ZMYM3Q14202 1370 aa6.43□□□□□ -1.38
LMO3-229ENST00000543721 RAD54L2Q9Y4B4 1467 aa6.43□□□□□ -1.38
LMO3-229ENST00000543721 GOLGA6L3A6NEY3 463 aa6.43□□□□□ -1.38
LMO3-229ENST00000543721 AAMPQ13685 434 aa6.43□□□□□ -1.38
LMO3-229ENST00000543721 CNGB1Q14028 1251 aaPredicted RBP6.43□□□□□ -1.38
LMO3-229ENST00000543721 NGEFQ8N5V2 710 aa6.43□□□□□ -1.38
LMO3-229ENST00000543721 DCAF11Q8TEB1 546 aa6.43□□□□□ -1.38
LMO3-229ENST00000543721 ADGBQ8N7X0 1667 aa6.42□□□□□ -1.38
LMO3-229ENST00000543721 ZNF326Q5BKZ1 582 aaKnown RBP6.42□□□□□ -1.38
LMO3-229ENST00000543721 NAP1L5Q96NT1 182 aaPredicted RBP6.42□□□□□ -1.38
LMO3-229ENST00000543721 ADGRL2O95490 1459 aa6.42□□□□□ -1.38
LMO3-229ENST00000543721 NINLQ9Y2I6 1382 aa6.42□□□□□ -1.38
LMO3-229ENST00000543721 ANKRD30AQ9BXX3 1397 aa6.41□□□□□ -1.38
LMO3-229ENST00000543721 CDCA7LQ96GN5 454 aa6.41□□□□□ -1.38
LMO3-229ENST00000543721 ST20-MTHFSA0A0A6YYL1 179 aa6.41□□□□□ -1.38
LMO3-229ENST00000543721 PLIN1O60240 522 aa6.41□□□□□ -1.38
LMO3-229ENST00000543721 VSIG10Q8N0Z9 540 aa6.41□□□□□ -1.38
LMO3-229ENST00000543721 RRAGDQ9NQL2 400 aaPredicted RBP6.41□□□□□ -1.38
LMO3-229ENST00000543721 VIRMAQ69YN4 1812 aaKnown RBP6.41□□□□□ -1.38
LMO3-229ENST00000543721 TPM2P07951 284 aa6.4□□□□□ -1.38
LMO3-229ENST00000543721 MRE11P49959 708 aa6.4□□□□□ -1.38
LMO3-229ENST00000543721 PKD2Q13563 968 aa6.4□□□□□ -1.38
LMO3-229ENST00000543721 CGNL1Q0VF96 1302 aa6.4□□□□□ -1.38
LMO3-229ENST00000543721 WDR62O43379 1518 aa6.4□□□□□ -1.39
LMO3-229ENST00000543721 PLEKHG5O94827 1062 aa6.4□□□□□ -1.39
LMO3-229ENST00000543721 PTMSP20962 102 aa6.4□□□□□ -1.39
LMO3-229ENST00000543721 GOLGA2Q08379 1002 aa6.4□□□□□ -1.39
LMO3-229ENST00000543721 FSD2A1L4K1 749 aa6.39□□□□□ -1.39
LMO3-229ENST00000543721 ZMYND15Q9H091 742 aa6.39□□□□□ -1.39
LMO3-229ENST00000543721 POGKQ9P215 609 aa6.39□□□□□ -1.39
LMO3-229ENST00000543721 CLASP1Q7Z460 1538 aa6.39□□□□□ -1.39
LMO3-229ENST00000543721 WDR43Q15061 677 aaKnown RBP eCLIP6.39□□□□□ -1.39
LMO3-229ENST00000543721 ITSN2Q9NZM3 1697 aa6.39□□□□□ -1.39
LMO3-229ENST00000543721 RGS3P49796 1198 aa6.39□□□□□ -1.39
LMO3-229ENST00000543721 CENPJQ9HC77 1338 aaPredicted RBP6.39□□□□□ -1.39
LMO3-229ENST00000543721 PER1O15534 1290 aaPredicted RBP6.38□□□□□ -1.39
LMO3-229ENST00000543721 TAOK2Q9UL54 1235 aa6.38□□□□□ -1.39
LMO3-229ENST00000543721 PDE3AQ14432 1141 aa6.38□□□□□ -1.39
LMO3-229ENST00000543721 KDM5DQ9BY66 1539 aa6.38□□□□□ -1.39
LMO3-229ENST00000543721 IQGAP2Q13576 1575 aa6.38□□□□□ -1.39
LMO3-229ENST00000543721 LAMC1P11047 1609 aa6.38□□□□□ -1.39
LMO3-229ENST00000543721 DUSP27Q5VZP5 1158 aa6.38□□□□□ -1.39
LMO3-229ENST00000543721 DDX11L8A8MPP1 907 aa6.37□□□□□ -1.39
LMO3-229ENST00000543721 MYH16Q9H6N6 1097 aa6.37□□□□□ -1.39
LMO3-229ENST00000543721 LAMC3Q9Y6N6 1575 aa6.37□□□□□ -1.39
LMO3-229ENST00000543721 XRCC6P12956 609 aaKnown RBP eCLIP6.37□□□□□ -1.39
LMO3-229ENST00000543721 TRIM44Q96DX7 344 aaPredicted RBP6.37□□□□□ -1.39
LMO3-229ENST00000543721 CHMP5Q9NZZ3 219 aa6.37□□□□□ -1.39
LMO3-229ENST00000543721 ANKRD50Q9ULJ7 1429 aa6.37□□□□□ -1.39
LMO3-229ENST00000543721 CDK13Q14004 1512 aaKnown RBP6.37□□□□□ -1.39
LMO3-229ENST00000543721 CAMSAP2Q08AD1 1489 aa6.37□□□□□ -1.39
LMO3-229ENST00000543721 COL17A1Q9UMD9 1497 aaPredicted RBP6.37□□□□□ -1.39
LMO3-229ENST00000543721 GPRASP1Q5JY77 1395 aa6.37□□□□□ -1.39
LMO3-229ENST00000543721 SENP3-EIF4A1A0A087X0R7 540 aa6.37□□□□□ -1.39
LMO3-229ENST00000543721 MCM4P33991 863 aa6.37□□□□□ -1.39
LMO3-229ENST00000543721 PMFBP1Q8TBY8 1022 aa6.37□□□□□ -1.39
LMO3-229ENST00000543721 MAP7D2Q96T17 732 aa6.37□□□□□ -1.39
LMO3-229ENST00000543721 PDCL3Q9H2J4 239 aa6.37□□□□□ -1.39
LMO3-229ENST00000543721 ZNF219Q9P2Y4 722 aaPredicted RBP6.37□□□□□ -1.39
LMO3-229ENST00000543721 ZNF608Q9ULD9 1512 aaPredicted RBP6.36□□□□□ -1.39
LMO3-229ENST00000543721 TMF1P82094 1093 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms