RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 FGD5Q6ZNL6 1462 aa9.24□□□□□ -0.93
CHKA-208ENST00000533910 DAXXQ9UER7 740 aaPredicted RBP9.24□□□□□ -0.93
CHKA-208ENST00000533910 WDR97A6NE52 1622 aa9.23□□□□□ -0.93
CHKA-208ENST00000533910 URB2Q14146 1524 aaKnown RBP9.23□□□□□ -0.93
CHKA-208ENST00000533910 TULP1O00294 542 aaPredicted RBP9.22□□□□□ -0.93
CHKA-208ENST00000533910 GPR153Q6NV75 609 aa9.22□□□□□ -0.93
CHKA-208ENST00000533910 KRTAP3-3Q9BYR6 98 aa9.22□□□□□ -0.93
CHKA-208ENST00000533910 KRTAP3-2Q9BYR7 98 aa9.22□□□□□ -0.93
CHKA-208ENST00000533910 GTF3C3Q9Y5Q9 886 aa9.22□□□□□ -0.93
CHKA-208ENST00000533910 VARS2Q5ST30 1063 aaKnown RBP9.21□□□□□ -0.94
CHKA-208ENST00000533910 SLC24A3Q9HC58 644 aa9.21□□□□□ -0.94
CHKA-208ENST00000533910 TIMELESSQ9UNS1 1208 aa9.21□□□□□ -0.94
CHKA-208ENST00000533910 POLA1P09884 1462 aaPredicted RBP9.21□□□□□ -0.94
CHKA-208ENST00000533910 LOC105371045A0A1W2PR82 267 aa9.2□□□□□ -0.94
CHKA-208ENST00000533910 FAM9AQ8IZU1 332 aaPredicted RBP9.2□□□□□ -0.94
CHKA-208ENST00000533910 C2orf72A6NCS6 295 aa9.19□□□□□ -0.94
CHKA-208ENST00000533910 KIF3CO14782 793 aa9.19□□□□□ -0.94
CHKA-208ENST00000533910 MLLT3P42568 568 aaPredicted RBP9.19□□□□□ -0.94
CHKA-208ENST00000533910 TMC2Q8TDI7 906 aa9.19□□□□□ -0.94
CHKA-208ENST00000533910 KIF27Q86VH2 1401 aa9.19□□□□□ -0.94
CHKA-208ENST00000533910 MRC2Q9UBG0 1479 aa9.19□□□□□ -0.94
CHKA-208ENST00000533910 ABCA10Q8WWZ4 1543 aa9.19□□□□□ -0.94
CHKA-208ENST00000533910 WDR62O43379 1518 aa9.18□□□□□ -0.94
CHKA-208ENST00000533910 BRPF1P55201 1214 aaPredicted RBP9.18□□□□□ -0.94
CHKA-208ENST00000533910 GOLGA3Q08378 1498 aa9.18□□□□□ -0.94
CHKA-208ENST00000533910 CAMK2BQ13554 666 aa9.18□□□□□ -0.94
CHKA-208ENST00000533910 ARSIQ5FYB1 569 aa9.18□□□□□ -0.94
CHKA-208ENST00000533910 ERICH3Q5RHP9 1530 aa9.18□□□□□ -0.94
CHKA-208ENST00000533910 THOC2Q8NI27 1593 aaKnown RBP9.17□□□□□ -0.94
CHKA-208ENST00000533910 PPP1R15BQ5SWA1 713 aa9.17□□□□□ -0.94
CHKA-208ENST00000533910 PRXQ9BXM0 1461 aa9.16□□□□□ -0.94
CHKA-208ENST00000533910 RBM26Q5T8P6 1007 aaKnown RBP9.16□□□□□ -0.94
CHKA-208ENST00000533910 ZNF687Q8N1G0 1237 aa9.16□□□□□ -0.94
CHKA-208ENST00000533910 TARBP1Q13395 1621 aaKnown RBP9.16□□□□□ -0.94
CHKA-208ENST00000533910 ABCA5Q8WWZ7 1642 aa9.16□□□□□ -0.94
CHKA-208ENST00000533910 CUX2O14529 1486 aa9.15□□□□□ -0.94
CHKA-208ENST00000533910 DSG2Q14126 1118 aa9.15□□□□□ -0.94
CHKA-208ENST00000533910 TMEM132AQ24JP5 1023 aa9.15□□□□□ -0.94
CHKA-208ENST00000533910 GPHNQ9NQX3 736 aaPredicted RBP9.15□□□□□ -0.94
CHKA-208ENST00000533910 EMILIN3Q9NT22 766 aa9.15□□□□□ -0.94
CHKA-208ENST00000533910 DPYSL4O14531 572 aa9.14□□□□□ -0.95
CHKA-208ENST00000533910 TNIKQ9UKE5 1360 aa9.13□□□□□ -0.95
CHKA-208ENST00000533910 ARIH1Q9Y4X5 557 aaPredicted RBP9.13□□□□□ -0.95
CHKA-208ENST00000533910 RAD54L2Q9Y4B4 1467 aa9.13□□□□□ -0.95
CHKA-208ENST00000533910 ZNF316A6NFI3 1004 aaPredicted RBP9.12□□□□□ -0.95
CHKA-208ENST00000533910 ZMYND10O75800 440 aa9.12□□□□□ -0.95
CHKA-208ENST00000533910 SLC34A2O95436 690 aa9.12□□□□□ -0.95
CHKA-208ENST00000533910 NEUROD2Q15784 382 aa9.12□□□□□ -0.95
CHKA-208ENST00000533910 RAPGEF2Q9Y4G8 1499 aa9.12□□□□□ -0.95
CHKA-208ENST00000533910 CUL7Q14999 1698 aa9.12□□□□□ -0.95
CHKA-208ENST00000533910 SMYD5Q6GMV2 418 aa9.1□□□□□ -0.95
CHKA-208ENST00000533910 KHSRPQ92945 711 aaKnown RBP eCLIP9.1□□□□□ -0.95
CHKA-208ENST00000533910 ERCC6Q03468 1493 aa9.09□□□□□ -0.95
CHKA-208ENST00000533910 CEP162Q5TB80 1403 aa9.09□□□□□ -0.95
CHKA-208ENST00000533910 PBRM1Q86U86 1689 aa9.09□□□□□ -0.95
CHKA-208ENST00000533910 NUDT7P0C024 238 aa9.08□□□□□ -0.96
CHKA-208ENST00000533910 PCDHGA4Q9Y5G9 962 aa9.08□□□□□ -0.96
CHKA-208ENST00000533910 IGF1RP08069 1367 aa9.08□□□□□ -0.96
CHKA-208ENST00000533910 IFT140Q96RY7 1462 aa9.07□□□□□ -0.96
CHKA-208ENST00000533910 BARGINQ6ZT62 677 aa9.06□□□□□ -0.96
CHKA-208ENST00000533910 GAPVD1Q14C86 1478 aa9.05□□□□□ -0.96
CHKA-208ENST00000533910 PTGER2P43116 358 aa9.05□□□□□ -0.96
CHKA-208ENST00000533910 PLPP6Q8IY26 295 aa9.05□□□□□ -0.96
CHKA-208ENST00000533910 FOXK1P85037 733 aa9.04□□□□□ -0.96
CHKA-208ENST00000533910 ERICH6Q7L0X2 663 aa9.04□□□□□ -0.96
CHKA-208ENST00000533910 GPIHBP1Q8IV16 184 aa9.04□□□□□ -0.96
CHKA-208ENST00000533910 EIF4G3O43432 1585 aaKnown RBP9.03□□□□□ -0.96
CHKA-208ENST00000533910 ADAMTS12P58397 1594 aa9.03□□□□□ -0.96
CHKA-208ENST00000533910 CARMIL1Q5VZK9 1371 aa9.03□□□□□ -0.96
CHKA-208ENST00000533910 PBX2P40425 430 aa9.03□□□□□ -0.96
CHKA-208ENST00000533910 RNF166Q96A37 237 aaPredicted RBP9.03□□□□□ -0.96
CHKA-208ENST00000533910 LHX6Q9UPM6 363 aa9.03□□□□□ -0.96
CHKA-208ENST00000533910 CTTNBP2Q8WZ74 1663 aa9.03□□□□□ -0.96
CHKA-208ENST00000533910 PSDA5PKW4 1024 aaPredicted RBP9.02□□□□□ -0.97
CHKA-208ENST00000533910 ANKRD13DQ6ZTN6 518 aa9.02□□□□□ -0.97
CHKA-208ENST00000533910 KRI1Q8N9T8 703 aaKnown RBP9.02□□□□□ -0.97
CHKA-208ENST00000533910 GPBP1L1Q9HC44 474 aaPredicted RBP9.02□□□□□ -0.97
CHKA-208ENST00000533910 MYT1LQ9UL68 1186 aa9.02□□□□□ -0.97
CHKA-208ENST00000533910 TBC1D12O60347 775 aa9.01□□□□□ -0.97
CHKA-208ENST00000533910 PDIA6Q15084 440 aa9.01□□□□□ -0.97
CHKA-208ENST00000533910 PTCD2Q8WV60 388 aaKnown RBP9.01□□□□□ -0.97
CHKA-208ENST00000533910 UPF1Q92900 1129 aaKnown RBP eCLIP9.01□□□□□ -0.97
CHKA-208ENST00000533910 TDRD9Q8NDG6 1382 aaKnown RBP9□□□□□ -0.97
CHKA-208ENST00000533910 CLIP1P30622 1438 aa9□□□□□ -0.97
CHKA-208ENST00000533910 GRXCR2A6NFK2 248 aa9□□□□□ -0.97
CHKA-208ENST00000533910 UBTFP17480 764 aaKnown RBP9□□□□□ -0.97
CHKA-208ENST00000533910 LSM11P83369 360 aaKnown RBP eCLIP9□□□□□ -0.97
CHKA-208ENST00000533910 ZNF608Q9ULD9 1512 aaPredicted RBP9□□□□□ -0.97
CHKA-208ENST00000533910 GRIN2BQ13224 1484 aa8.99□□□□□ -0.97
CHKA-208ENST00000533910 SPDYE16A6NNV3 312 aaPredicted RBP8.97□□□□□ -0.97
CHKA-208ENST00000533910 MAP3K9P80192 1104 aa8.97□□□□□ -0.97
CHKA-208ENST00000533910 AK7Q96M32 723 aa8.97□□□□□ -0.97
CHKA-208ENST00000533910 FHAD1B1AJZ9 1412 aa8.97□□□□□ -0.97
CHKA-208ENST00000533910 AQRO60306 1485 aaKnown RBP eCLIP8.96□□□□□ -0.977e-8■■■■□ 20.9
CHKA-208ENST00000533910 ARAP1Q96P48 1450 aa8.96□□□□□ -0.97
CHKA-208ENST00000533910 C14orf37Q86TY3 774 aa8.96□□□□□ -0.98
CHKA-208ENST00000533910 VPS8Q8N3P4 1428 aa8.96□□□□□ -0.98
CHKA-208ENST00000533910 GPR37O15354 613 aa8.95□□□□□ -0.98
CHKA-208ENST00000533910 MAGI1Q96QZ7 1491 aaPredicted RBP8.95□□□□□ -0.98
CHKA-208ENST00000533910 ARHGAP35Q9NRY4 1499 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms