RNA–Protein interactions for RNA: ENST00000531695.1

CHD7-210, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-210ENST00000531695 ACIN1Q9UKV3 1341 aaKnown RBP8.63□□□□□ -1.03
CHD7-210ENST00000531695 NUDT7P0C024 238 aa8.63□□□□□ -1.03
CHD7-210ENST00000531695 LHX6Q9UPM6 363 aa8.63□□□□□ -1.03
CHD7-210ENST00000531695 TIAM1Q13009 1591 aa8.63□□□□□ -1.03
CHD7-210ENST00000531695 CC2D2AQ9P2K1 1620 aa8.62□□□□□ -1.03
CHD7-210ENST00000531695 DNMBPQ6XZF7 1577 aa8.62□□□□□ -1.03
CHD7-210ENST00000531695 NKX1-1Q15270 411 aaPredicted RBP8.62□□□□□ -1.03
CHD7-210ENST00000531695 MYT1LQ9UL68 1186 aa8.62□□□□□ -1.03
CHD7-210ENST00000531695 FGD5Q6ZNL6 1462 aa8.62□□□□□ -1.03
CHD7-210ENST00000531695 LSM11P83369 360 aaKnown RBP eCLIP8.61□□□□□ -1.03
CHD7-210ENST00000531695 RNF166Q96A37 237 aaPredicted RBP8.61□□□□□ -1.03
CHD7-210ENST00000531695 WDR97A6NE52 1622 aa8.61□□□□□ -1.03
CHD7-210ENST00000531695 IGF1RP08069 1367 aa8.61□□□□□ -1.03
CHD7-210ENST00000531695 TTBK1Q5TCY1 1321 aaPredicted RBP8.6□□□□□ -1.03
CHD7-210ENST00000531695 CUL7Q14999 1698 aa8.6□□□□□ -1.03
CHD7-210ENST00000531695 DHX57Q6P158 1386 aaKnown RBP8.6□□□□□ -1.03
CHD7-210ENST00000531695 PSDA5PKW4 1024 aaPredicted RBP8.59□□□□□ -1.03
CHD7-210ENST00000531695 EFCAB5A4FU69 1503 aa8.59□□□□□ -1.03
CHD7-210ENST00000531695 ABCA10Q8WWZ4 1543 aa8.59□□□□□ -1.03
CHD7-210ENST00000531695 CHGAP10645 457 aaKnown RBP8.58□□□□□ -1.04
CHD7-210ENST00000531695 PLPP6Q8IY26 295 aa8.58□□□□□ -1.04
CHD7-210ENST00000531695 RYDENQ9NUL5 291 aaKnown RBP8.58□□□□□ -1.04
CHD7-210ENST00000531695 CTTNBP2Q8WZ74 1663 aa8.58□□□□□ -1.04
CHD7-210ENST00000531695 CENPBP07199 599 aaPredicted RBP8.57□□□□□ -1.04
CHD7-210ENST00000531695 DSG2Q14126 1118 aa8.57□□□□□ -1.04
CHD7-210ENST00000531695 AQRO60306 1485 aaKnown RBP eCLIP8.57□□□□□ -1.04
CHD7-210ENST00000531695 NEUROD1Q13562 356 aa8.56□□□□□ -1.04
CHD7-210ENST00000531695 CRISPLD2Q9H0B8 497 aa8.56□□□□□ -1.04
CHD7-210ENST00000531695 CARMIL1Q5VZK9 1371 aa8.56□□□□□ -1.04
CHD7-210ENST00000531695 CCNB3Q8WWL7 1395 aa8.56□□□□□ -1.04
CHD7-210ENST00000531695 FANCD2Q9BXW9 1451 aa8.56□□□□□ -1.04
CHD7-210ENST00000531695 KANK4Q5T7N3 995 aaPredicted RBP8.55□□□□□ -1.04
CHD7-210ENST00000531695 PCF11O94913 1555 aaKnown RBP8.55□□□□□ -1.04
CHD7-210ENST00000531695 FHAD1B1AJZ9 1412 aa8.54□□□□□ -1.04
CHD7-210ENST00000531695 TOPBP1Q92547 1522 aa8.54□□□□□ -1.04
CHD7-210ENST00000531695 LAMC3Q9Y6N6 1575 aa8.54□□□□□ -1.04
CHD7-210ENST00000531695 LRRC9Q6ZRR7 1453 aa8.54□□□□□ -1.04
CHD7-210ENST00000531695 ARHGAP33O14559 1287 aa8.53□□□□□ -1.04
CHD7-210ENST00000531695 ANKRD13DQ6ZTN6 518 aa8.53□□□□□ -1.04
CHD7-210ENST00000531695 ABCA5Q8WWZ7 1642 aa8.53□□□□□ -1.04
CHD7-210ENST00000531695 KIF21AQ7Z4S6 1674 aa8.53□□□□□ -1.04
CHD7-210ENST00000531695 POLA1P09884 1462 aaPredicted RBP8.52□□□□□ -1.05
CHD7-210ENST00000531695 FYCO1Q9BQS8 1478 aa8.52□□□□□ -1.05
CHD7-210ENST00000531695 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.52□□□□□ -1.05
CHD7-210ENST00000531695 OXER1Q8TDS5 423 aa8.52□□□□□ -1.05
CHD7-210ENST00000531695 MAPKBP1O60336 1514 aa8.51□□□□□ -1.05
CHD7-210ENST00000531695 TK2O00142 265 aa8.51□□□□□ -1.05
CHD7-210ENST00000531695 SAMD9Q5K651 1589 aa8.51□□□□□ -1.05
CHD7-210ENST00000531695 GTPBP6O43824 516 aaPredicted RBP8.5□□□□□ -1.05
CHD7-210ENST00000531695 TBC1D12O60347 775 aa8.5□□□□□ -1.05
CHD7-210ENST00000531695 THOC2Q8NI27 1593 aaKnown RBP8.5□□□□□ -1.05
CHD7-210ENST00000531695 CASKIN1Q8WXD9 1431 aa8.5□□□□□ -1.05
CHD7-210ENST00000531695 AXIN2Q9Y2T1 843 aa8.5□□□□□ -1.05
CHD7-210ENST00000531695 HRO43593 1189 aa8.49□□□□□ -1.05
CHD7-210ENST00000531695 NCKAP5LQ9HCH0 1330 aa8.49□□□□□ -1.05
CHD7-210ENST00000531695 ANO8Q9HCE9 1232 aaPredicted RBP8.48□□□□□ -1.05
CHD7-210ENST00000531695 SNAPC4Q5SXM2 1469 aa8.47□□□□□ -1.05
CHD7-210ENST00000531695 ADGRD1Q6QNK2 874 aa8.47□□□□□ -1.05
CHD7-210ENST00000531695 RAD54L2Q9Y4B4 1467 aa8.46□□□□□ -1.05
CHD7-210ENST00000531695 URB2Q14146 1524 aaKnown RBP8.46□□□□□ -1.05
CHD7-210ENST00000531695 PHLDB1Q86UU1 1377 aa8.46□□□□□ -1.06
CHD7-210ENST00000531695 LRRIQ1Q96JM4 1722 aa8.46□□□□□ -1.06
CHD7-210ENST00000531695 SETD5Q9C0A6 1442 aa8.46□□□□□ -1.06
CHD7-210ENST00000531695 PDE4AP27815 886 aa8.45□□□□□ -1.06
CHD7-210ENST00000531695 PPP4R3BQ5MIZ7 849 aa8.45□□□□□ -1.06
CHD7-210ENST00000531695 RAB3GAP2Q9H2M9 1393 aa8.45□□□□□ -1.06
CHD7-210ENST00000531695 RANGAP1P46060 587 aaPredicted RBP8.44□□□□□ -1.06
CHD7-210ENST00000531695 MFSD10Q14728 455 aa8.44□□□□□ -1.06
CHD7-210ENST00000531695 PPP1R15BQ5SWA1 713 aa8.44□□□□□ -1.06
CHD7-210ENST00000531695 DMRTA1Q5VZB9 504 aa8.44□□□□□ -1.06
CHD7-210ENST00000531695 GTF3C3Q9Y5Q9 886 aa8.44□□□□□ -1.06
CHD7-210ENST00000531695 FMN1Q68DA7 1419 aa8.44□□□□□ -1.06
CHD7-210ENST00000531695 NESP48681 1621 aa8.43□□□□□ -1.06
CHD7-210ENST00000531695 TARBP1Q13395 1621 aaKnown RBP8.43□□□□□ -1.06
CHD7-210ENST00000531695 SLC4A5Q9BY07 1137 aa8.43□□□□□ -1.06
CHD7-210ENST00000531695 GRIN2BQ13224 1484 aa8.43□□□□□ -1.06
CHD7-210ENST00000531695 PSEN2P49810 448 aa8.42□□□□□ -1.06
CHD7-210ENST00000531695 FHOD3Q2V2M9 1422 aa8.42□□□□□ -1.06
CHD7-210ENST00000531695 ARHGEF11O15085 1522 aa8.42□□□□□ -1.06
CHD7-210ENST00000531695 PBRM1Q86U86 1689 aa8.41□□□□□ -1.06
CHD7-210ENST00000531695 BCL2L12Q9HB09 334 aa8.41□□□□□ -1.06
CHD7-210ENST00000531695 EHBP1L1Q8N3D4 1523 aa8.4□□□□□ -1.06
CHD7-210ENST00000531695 FOSBP53539 338 aa8.4□□□□□ -1.06
CHD7-210ENST00000531695 TIMELESSQ9UNS1 1208 aa8.4□□□□□ -1.06
CHD7-210ENST00000531695 SUPT6HQ7KZ85 1726 aaKnown RBP8.4□□□□□ -1.07
CHD7-210ENST00000531695 GAPVD1Q14C86 1478 aa8.39□□□□□ -1.07
CHD7-210ENST00000531695 FGD6Q6ZV73 1430 aa8.39□□□□□ -1.07
CHD7-210ENST00000531695 HCSTQ9UBK5 93 aa8.39□□□□□ -1.07
CHD7-210ENST00000531695 PDS5BQ9NTI5 1447 aa8.38□□□□□ -1.07
CHD7-210ENST00000531695 GCC2Q8IWJ2 1684 aa8.38□□□□□ -1.07
CHD7-210ENST00000531695 PTPN23Q9H3S7 1636 aa8.37□□□□□ -1.07
CHD7-210ENST00000531695 ADAMTS12P58397 1594 aa8.37□□□□□ -1.07
CHD7-210ENST00000531695 BHMG1C9JSJ3 638 aaPredicted RBP8.37□□□□□ -1.07
CHD7-210ENST00000531695 VPS9D1Q9Y2B5 631 aa8.37□□□□□ -1.07
CHD7-210ENST00000531695 UGGT2Q9NYU1 1516 aa8.37□□□□□ -1.07
CHD7-210ENST00000531695 TCOF1Q13428 1488 aaKnown RBP8.37□□□□□ -1.07
CHD7-210ENST00000531695 HFM1A2PYH4 1435 aa8.37□□□□□ -1.07
CHD7-210ENST00000531695 UPF1Q92900 1129 aaKnown RBP eCLIP8.36□□□□□ -1.07
CHD7-210ENST00000531695 DDX27Q96GQ7 796 aaKnown RBP8.36□□□□□ -1.07
CHD7-210ENST00000531695 CCDC18Q5T9S5 1454 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms