RNA–Protein interactions for RNA: ENST00000531695.1

CHD7-210, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-210ENST00000531695 AEBP2Q6ZN18 517 aaPredicted RBP20.27■□□□□ 0.84
CHD7-210ENST00000531695 CHIC1Q5VXU3 224 aa19.28■□□□□ 0.68
CHD7-210ENST00000531695 SENP3Q9H4L4 574 aaPredicted RBP17.27■□□□□ 0.36
CHD7-210ENST00000531695 PHF23Q9BUL5 403 aaPredicted RBP17.04■□□□□ 0.32
CHD7-210ENST00000531695 FOXD1Q16676 465 aa16.1■□□□□ 0.17
CHD7-210ENST00000531695 PLPPR3Q6T4P5 718 aa15.38■□□□□ 0.05
CHD7-210ENST00000531695 MSH5O43196 834 aa15.07■□□□□ 0
CHD7-210ENST00000531695 PPP6R1Q9UPN7 881 aa15.07■□□□□ 0
CHD7-210ENST00000531695 PIAS4Q8N2W9 510 aaPredicted RBP14.96□□□□□ -0.01
CHD7-210ENST00000531695 ADRA2BP18089 450 aa14.95□□□□□ -0.02
CHD7-210ENST00000531695 POTEDQ86YR6 584 aa14.67□□□□□ -0.06
CHD7-210ENST00000531695 MAPK8IP2Q13387 824 aaPredicted RBP13.74□□□□□ -0.21
CHD7-210ENST00000531695 DMRT2Q9Y5R5 561 aa13.73□□□□□ -0.21
CHD7-210ENST00000531695 SCAF1Q9H7N4 1312 aaKnown RBP13.71□□□□□ -0.21
CHD7-210ENST00000531695 PPP4R3CPQ6ZMV5 832 aa13.46□□□□□ -0.25
CHD7-210ENST00000531695 HOXD11P31277 338 aaPredicted RBP13.28□□□□□ -0.28
CHD7-210ENST00000531695 CNKSR2Q8WXI2 1034 aa13.24□□□□□ -0.29
CHD7-210ENST00000531695 RNF216Q9NWF9 866 aaPredicted RBP13.14□□□□□ -0.31
CHD7-210ENST00000531695 NCBP3Q53F19 620 aaKnown RBP12.93□□□□□ -0.34
CHD7-210ENST00000531695 DNAJC5BQ9UF47 199 aa12.93□□□□□ -0.34
CHD7-210ENST00000531695 DCAF8L1A6NGE4 600 aa12.92□□□□□ -0.34
CHD7-210ENST00000531695 RNF39Q9H2S5 420 aa12.89□□□□□ -0.35
CHD7-210ENST00000531695 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
CHD7-210ENST00000531695 NPM3O75607 178 aaKnown RBP12.78□□□□□ -0.36
CHD7-210ENST00000531695 C1QBPQ07021 282 aaKnown RBP12.7□□□□□ -0.38
CHD7-210ENST00000531695 KCNA4P22459 653 aa12.5□□□□□ -0.41
CHD7-210ENST00000531695 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.46□□□□□ -0.41
CHD7-210ENST00000531695 U3KPZ7 1027 aaPredicted RBP12.31□□□□□ -0.44
CHD7-210ENST00000531695 SLC4A2P04920 1241 aa12.24□□□□□ -0.45
CHD7-210ENST00000531695 NISCHQ9Y2I1 1504 aa12.21□□□□□ -0.45
CHD7-210ENST00000531695 SPINK5Q9NQ38 1064 aaPredicted RBP12.08□□□□□ -0.48
CHD7-210ENST00000531695 DSG3P32926 999 aa12.05□□□□□ -0.48
CHD7-210ENST00000531695 CAPN15O75808 1086 aa11.98□□□□□ -0.49
CHD7-210ENST00000531695 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.96□□□□□ -0.49
CHD7-210ENST00000531695 HNRNPUL2Q1KMD3 747 aaKnown RBP11.96□□□□□ -0.49
CHD7-210ENST00000531695 APLP2Q06481 763 aa11.94□□□□□ -0.5
CHD7-210ENST00000531695 SAMD1Q6SPF0 538 aaPredicted RBP11.88□□□□□ -0.51
CHD7-210ENST00000531695 ZNF219Q9P2Y4 722 aaPredicted RBP11.87□□□□□ -0.51
CHD7-210ENST00000531695 MYCNP04198 464 aaPredicted RBP11.8□□□□□ -0.52
CHD7-210ENST00000531695 TRHP20396 242 aaPredicted RBP11.78□□□□□ -0.52
CHD7-210ENST00000531695 SLC4A1APQ9BWU0 796 aaKnown RBP11.77□□□□□ -0.53
CHD7-210ENST00000531695 ABCB7O75027 752 aa11.69□□□□□ -0.54
CHD7-210ENST00000531695 FOXD4L1Q9NU39 408 aa11.69□□□□□ -0.54
CHD7-210ENST00000531695 POLA2Q14181 598 aa11.55□□□□□ -0.56
CHD7-210ENST00000531695 ZBTB22O15209 634 aa11.53□□□□□ -0.56
CHD7-210ENST00000531695 ATF5Q9Y2D1 282 aaPredicted RBP11.53□□□□□ -0.56
CHD7-210ENST00000531695 POTEHQ6S545 545 aa11.48□□□□□ -0.57
CHD7-210ENST00000531695 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
CHD7-210ENST00000531695 ATXN8OSP0DMR3 200 aa11.41□□□□□ -0.58
CHD7-210ENST00000531695 ZBTB12Q9Y330 459 aaPredicted RBP11.35□□□□□ -0.59
CHD7-210ENST00000531695 AKT1S1Q96B36 256 aa11.24□□□□□ -0.61
CHD7-210ENST00000531695 CHRDL2Q6WN34 429 aa11.19□□□□□ -0.62
CHD7-210ENST00000531695 OSCARQ8IYS5 282 aa11.15□□□□□ -0.62
CHD7-210ENST00000531695 REM2Q8IYK8 340 aaPredicted RBP11.1□□□□□ -0.63
CHD7-210ENST00000531695 MKRN4PQ13434 485 aaPredicted RBP11.03□□□□□ -0.64
CHD7-210ENST00000531695 SPDYE2BA6NHP3 402 aa11.02□□□□□ -0.65
CHD7-210ENST00000531695 SPDYE6P0CI01 402 aa11.02□□□□□ -0.65
CHD7-210ENST00000531695 SPDYE2Q495Y8 402 aa11.02□□□□□ -0.65
CHD7-210ENST00000531695 CSRNP3Q8WYN3 585 aa11.02□□□□□ -0.65
CHD7-210ENST00000531695 FBLN2P98095 1184 aa11.01□□□□□ -0.65
CHD7-210ENST00000531695 PITPNM1O00562 1244 aa10.96□□□□□ -0.65
CHD7-210ENST00000531695 FXR2P51116 673 aaKnown RBP eCLIP10.95□□□□□ -0.662e-7■■■□□ 15
CHD7-210ENST00000531695 PIP4P2Q8N4L2 257 aa10.94□□□□□ -0.66
CHD7-210ENST00000531695 SSUH2Q9Y2M2 353 aa10.92□□□□□ -0.66
CHD7-210ENST00000531695 ZNF692Q9BU19 519 aaPredicted RBP10.82□□□□□ -0.68
CHD7-210ENST00000531695 SPDYE1Q8NFV5 336 aaPredicted RBP10.79□□□□□ -0.68
CHD7-210ENST00000531695 SP7Q8TDD2 431 aaPredicted RBP10.77□□□□□ -0.69
CHD7-210ENST00000531695 EHMT2Q96KQ7 1210 aa10.69□□□□□ -0.7
CHD7-210ENST00000531695 PABPN1Q86U42 306 aaKnown RBP eCLIP10.66□□□□□ -0.7
CHD7-210ENST00000531695 CLEC11AQ9Y240 323 aa10.66□□□□□ -0.7
CHD7-210ENST00000531695 HAX1O00165 279 aa10.65□□□□□ -0.7
CHD7-210ENST00000531695 PRKAR2AP13861 404 aaKnown RBP10.64□□□□□ -0.71
CHD7-210ENST00000531695 EVX2Q03828 476 aa10.62□□□□□ -0.71
CHD7-210ENST00000531695 C19orf67A6NJJ6 358 aa10.58□□□□□ -0.72
CHD7-210ENST00000531695 CCDC180Q9P1Z9 1646 aa10.55□□□□□ -0.72
CHD7-210ENST00000531695 PRR29P0C7W0 189 aa10.55□□□□□ -0.72
CHD7-210ENST00000531695 CHADLQ6NUI6 762 aa10.5□□□□□ -0.73
CHD7-210ENST00000531695 SPDYE4A6NLX3 237 aa10.44□□□□□ -0.74
CHD7-210ENST00000531695 STAG3Q9UJ98 1225 aa10.43□□□□□ -0.74
CHD7-210ENST00000531695 FARP1Q9Y4F1 1045 aaPredicted RBP10.42□□□□□ -0.74
CHD7-210ENST00000531695 ZCCHC6Q5VYS8 1495 aaKnown RBP10.38□□□□□ -0.75
CHD7-210ENST00000531695 GABBR2O75899 941 aa10.38□□□□□ -0.75
CHD7-210ENST00000531695 PROM2Q8N271 834 aa10.37□□□□□ -0.75
CHD7-210ENST00000531695 CREBZFQ9NS37 354 aa10.36□□□□□ -0.75
CHD7-210ENST00000531695 CLCN6P51797 869 aa10.33□□□□□ -0.76
CHD7-210ENST00000531695 CD44P16070 742 aaKnown RBP10.3□□□□□ -0.76
CHD7-210ENST00000531695 MNX1P50219 401 aaPredicted RBP10.26□□□□□ -0.77
CHD7-210ENST00000531695 ZNF579Q8NAF0 562 aaKnown RBP10.23□□□□□ -0.77
CHD7-210ENST00000531695 POTEIP0CG38 1075 aa10.2□□□□□ -0.78
CHD7-210ENST00000531695 DCAF1Q9Y4B6 1507 aa10.18□□□□□ -0.78
CHD7-210ENST00000531695 ZRANB1Q9UGI0 708 aa10.14□□□□□ -0.79
CHD7-210ENST00000531695 NPM1P06748 294 aaKnown RBP eCLIP10.12□□□□□ -0.79
CHD7-210ENST00000531695 LHX8Q68G74 356 aa10.08□□□□□ -0.8
CHD7-210ENST00000531695 SHROOM4Q9ULL8 1493 aa10.07□□□□□ -0.8
CHD7-210ENST00000531695 GALR2O43603 387 aaPredicted RBP10.04□□□□□ -0.8
CHD7-210ENST00000531695 PAK3O75914 559 aaPredicted RBP10.04□□□□□ -0.8
CHD7-210ENST00000531695 DCBLD2Q96PD2 775 aa10.01□□□□□ -0.81
CHD7-210ENST00000531695 PHF12Q96QT6 1004 aa9.99□□□□□ -0.81
CHD7-210ENST00000531695 CCDC61Q9Y6R9 512 aa9.97□□□□□ -0.81
CHD7-210ENST00000531695 ASTLQ6HA08 431 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms