RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 USP47Q96K76 1375 aa6.12□□□□□ -1.43
CASP4-207ENST00000529565 MS4A1P11836 297 aa6.11□□□□□ -1.43
CASP4-207ENST00000529565 WDR97A6NE52 1622 aa6.11□□□□□ -1.43
CASP4-207ENST00000529565 ADAMTS12P58397 1594 aa6.11□□□□□ -1.43
CASP4-207ENST00000529565 FOXD4L1Q9NU39 408 aa6.11□□□□□ -1.43
CASP4-207ENST00000529565 RNF216Q9NWF9 866 aaPredicted RBP6.11□□□□□ -1.43
CASP4-207ENST00000529565 ST20-MTHFSA0A0A6YYL1 179 aa6.11□□□□□ -1.43
CASP4-207ENST00000529565 TNNT2P45379 298 aaPredicted RBP6.11□□□□□ -1.43
CASP4-207ENST00000529565 CHMP4BQ9H444 224 aaKnown RBP6.11□□□□□ -1.43
CASP4-207ENST00000529565 KIAA1107Q9UPP5 1409 aa6.11□□□□□ -1.43
CASP4-207ENST00000529565 KIF21AQ7Z4S6 1674 aa6.11□□□□□ -1.43
CASP4-207ENST00000529565 CCDC141Q6ZP82 1450 aa6.11□□□□□ -1.43
CASP4-207ENST00000529565 U2SURPO15042 1029 aaKnown RBP6.11□□□□□ -1.43
CASP4-207ENST00000529565 NPM2Q86SE8 214 aaKnown RBP6.11□□□□□ -1.43
CASP4-207ENST00000529565 UGGT2Q9NYU1 1516 aa6.1□□□□□ -1.43
CASP4-207ENST00000529565 LMOD2Q6P5Q4 547 aa6.1□□□□□ -1.43
CASP4-207ENST00000529565 NLRP13Q86W25 1043 aa6.1□□□□□ -1.43
CASP4-207ENST00000529565 SCAPERQ9BY12 1400 aa6.1□□□□□ -1.43
CASP4-207ENST00000529565 BCL11AQ9H165 835 aa6.1□□□□□ -1.43
CASP4-207ENST00000529565 CTTNBP2Q8WZ74 1663 aa6.1□□□□□ -1.43
CASP4-207ENST00000529565 EVC2Q86UK5 1308 aa6.09□□□□□ -1.43
CASP4-207ENST00000529565 PTPN23Q9H3S7 1636 aa6.09□□□□□ -1.43
CASP4-207ENST00000529565 TRAK1Q9UPV9 953 aa6.09□□□□□ -1.43
CASP4-207ENST00000529565 ARHGEF11O15085 1522 aa6.09□□□□□ -1.43
CASP4-207ENST00000529565 CAMSAP2Q08AD1 1489 aa6.09□□□□□ -1.43
CASP4-207ENST00000529565 NAIPQ13075 1403 aa6.09□□□□□ -1.44
CASP4-207ENST00000529565 NEUROD2Q15784 382 aa6.08□□□□□ -1.44
CASP4-207ENST00000529565 CALD1Q05682 793 aaKnown RBP6.08□□□□□ -1.44
CASP4-207ENST00000529565 SUPT16HQ9Y5B9 1047 aaKnown RBP6.08□□□□□ -1.44
CASP4-207ENST00000529565 RAPGEF6Q8TEU7 1601 aa6.08□□□□□ -1.44
CASP4-207ENST00000529565 CD109Q6YHK3 1445 aa6.07□□□□□ -1.44
CASP4-207ENST00000529565 AKNAQ7Z591 1439 aa6.07□□□□□ -1.44
CASP4-207ENST00000529565 PLEKHG5O94827 1062 aa6.07□□□□□ -1.44
CASP4-207ENST00000529565 FTSJ3Q8IY81 847 aaKnown RBP6.07□□□□□ -1.44
CASP4-207ENST00000529565 EIF5BO60841 1220 aaKnown RBP6.07□□□□□ -1.44
CASP4-207ENST00000529565 NUTM2DQ5VT03 806 aaPredicted RBP6.07□□□□□ -1.44
CASP4-207ENST00000529565 MYBBP1AQ9BQG0 1328 aaKnown RBP6.07□□□□□ -1.44
CASP4-207ENST00000529565 EIF4G3O43432 1585 aaKnown RBP6.07□□□□□ -1.44
CASP4-207ENST00000529565 ABCC5O15440 1437 aa6.07□□□□□ -1.44
CASP4-207ENST00000529565 IRX6P78412 446 aaPredicted RBP6.07□□□□□ -1.44
CASP4-207ENST00000529565 PPP4R2Q9NY27 417 aa6.07□□□□□ -1.44
CASP4-207ENST00000529565 SLC52A1Q9NWF4 448 aa6.07□□□□□ -1.44
CASP4-207ENST00000529565 ERICH6BQ5W0A0 696 aa6.06□□□□□ -1.44
CASP4-207ENST00000529565 ABCA5Q8WWZ7 1642 aa6.06□□□□□ -1.44
CASP4-207ENST00000529565 CENPJQ9HC77 1338 aaPredicted RBP6.06□□□□□ -1.44
CASP4-207ENST00000529565 NUP160Q12769 1436 aa6.06□□□□□ -1.44
CASP4-207ENST00000529565 KIAA0556O60303 1618 aa6.06□□□□□ -1.44
CASP4-207ENST00000529565 PDE3BQ13370 1112 aa6.06□□□□□ -1.44
CASP4-207ENST00000529565 PANK3Q9H999 370 aa6.06□□□□□ -1.44
CASP4-207ENST00000529565 LAS1LQ9Y4W2 734 aaKnown RBP6.06□□□□□ -1.44
CASP4-207ENST00000529565 CGNL1Q0VF96 1302 aa6.06□□□□□ -1.44
CASP4-207ENST00000529565 U2AF1L5P0DN76 240 aaPredicted RBP6.06□□□□□ -1.44
CASP4-207ENST00000529565 U2AF1Q01081 240 aaKnown RBP eCLIP6.06□□□□□ -1.44
CASP4-207ENST00000529565 CHMP4AQ9BY43 222 aa6.06□□□□□ -1.44
CASP4-207ENST00000529565 RPGRIP1LQ68CZ1 1315 aa6.05□□□□□ -1.44
CASP4-207ENST00000529565 NGDNQ8NEJ9 315 aaKnown RBP6.05□□□□□ -1.44
CASP4-207ENST00000529565 ADGRL1O94910 1474 aa6.05□□□□□ -1.44
CASP4-207ENST00000529565 POGZQ7Z3K3 1410 aa6.05□□□□□ -1.44
CASP4-207ENST00000529565 CCDC7Q96M83 1385 aa6.05□□□□□ -1.44
CASP4-207ENST00000529565 PRKRIP1Q9H875 184 aaPredicted RBP6.05□□□□□ -1.44
CASP4-207ENST00000529565 RTF1Q92541 710 aaKnown RBP6.05□□□□□ -1.44
CASP4-207ENST00000529565 NUP153P49790 1475 aaKnown RBP6.05□□□□□ -1.44
CASP4-207ENST00000529565 ATP10BO94823 1461 aa6.04□□□□□ -1.44
CASP4-207ENST00000529565 NCOA1Q15788 1441 aa6.04□□□□□ -1.44
CASP4-207ENST00000529565 GPATCH8Q9UKJ3 1502 aaKnown RBP6.04□□□□□ -1.44
CASP4-207ENST00000529565 PAK3O75914 559 aaPredicted RBP6.04□□□□□ -1.44
CASP4-207ENST00000529565 NGEFQ8N5V2 710 aa6.04□□□□□ -1.44
CASP4-207ENST00000529565 PBRM1Q86U86 1689 aa6.04□□□□□ -1.44
CASP4-207ENST00000529565 ANKRD30BQ9BXX2 1392 aa6.04□□□□□ -1.44
CASP4-207ENST00000529565 A0A0G2JS52 829 aa6.04□□□□□ -1.44
CASP4-207ENST00000529565 HSP90AA1P07900 732 aaKnown RBP6.04□□□□□ -1.44
CASP4-207ENST00000529565 RAPGEF3O95398 923 aa6.03□□□□□ -1.44
CASP4-207ENST00000529565 LMOD3Q0VAK6 560 aa6.03□□□□□ -1.44
CASP4-207ENST00000529565 ITSN2Q9NZM3 1697 aa6.03□□□□□ -1.44
CASP4-207ENST00000529565 SOX12O15370 315 aa6.03□□□□□ -1.44
CASP4-207ENST00000529565 IPO8O15397 1037 aaKnown RBP6.03□□□□□ -1.44
CASP4-207ENST00000529565 KIF7Q2M1P5 1343 aa6.03□□□□□ -1.44
CASP4-207ENST00000529565 FRAT1Q92837 279 aaPredicted RBP6.03□□□□□ -1.44
CASP4-207ENST00000529565 FANCAO15360 1455 aa6.02□□□□□ -1.44
CASP4-207ENST00000529565 MINK1Q8N4C8 1332 aaPredicted RBP6.02□□□□□ -1.45
CASP4-207ENST00000529565 PLCH2O75038 1416 aa6.02□□□□□ -1.45
CASP4-207ENST00000529565 CNTLNQ9NXG0 1405 aa6.02□□□□□ -1.45
CASP4-207ENST00000529565 PODXL2Q9NZ53 605 aa6.02□□□□□ -1.45
CASP4-207ENST00000529565 DENND4BO75064 1496 aaPredicted RBP6.02□□□□□ -1.45
CASP4-207ENST00000529565 SENP3-EIF4A1A0A087X0R7 540 aa6.02□□□□□ -1.45
CASP4-207ENST00000529565 GOLGA2Q08379 1002 aa6.02□□□□□ -1.45
CASP4-207ENST00000529565 COG3Q96JB2 828 aa6.02□□□□□ -1.45
CASP4-207ENST00000529565 WASHC2AQ641Q2 1341 aa6.02□□□□□ -1.45
CASP4-207ENST00000529565 CFAP43Q8NDM7 1665 aa6.01□□□□□ -1.45
CASP4-207ENST00000529565 RCAN3Q9UKA8 241 aa6.01□□□□□ -1.45
CASP4-207ENST00000529565 TARBP1Q13395 1621 aaKnown RBP6.01□□□□□ -1.45
CASP4-207ENST00000529565 AMPHP49418 695 aa6.01□□□□□ -1.45
CASP4-207ENST00000529565 THEMISQ8N1K5 641 aaPredicted RBP6.01□□□□□ -1.45
CASP4-207ENST00000529565 DDRGK1Q96HY6 314 aa6.01□□□□□ -1.45
CASP4-207ENST00000529565 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6□□□□□ -1.45
CASP4-207ENST00000529565 TCOF1Q13428 1488 aaKnown RBP6□□□□□ -1.45
CASP4-207ENST00000529565 WDR7Q9Y4E6 1490 aa6□□□□□ -1.45
CASP4-207ENST00000529565 ATXN8OSP0DMR3 200 aa6□□□□□ -1.45
CASP4-207ENST00000529565 CFAP70Q5T0N1 1121 aa6□□□□□ -1.45
CASP4-207ENST00000529565 ASXL2Q76L83 1435 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms