RNA–Protein interactions for RNA: ENST00000525056.1

ATM-206, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 657 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-206ENST00000525056 FAM163AQ96GL9 167 aaPredicted RBP10.05□□□□□ -0.8
ATM-206ENST00000525056 KIF21BO75037 1637 aa10.04□□□□□ -0.8
ATM-206ENST00000525056 OXER1Q8TDS5 423 aa10.04□□□□□ -0.8
ATM-206ENST00000525056 EMILIN3Q9NT22 766 aa10.04□□□□□ -0.8
ATM-206ENST00000525056 CEP162Q5TB80 1403 aa10.04□□□□□ -0.8
ATM-206ENST00000525056 UPF1Q92900 1129 aaKnown RBP eCLIP10.03□□□□□ -0.8
ATM-206ENST00000525056 ZSWIM6Q9HCJ5 1215 aa10.03□□□□□ -0.8
ATM-206ENST00000525056 TDRD9Q8NDG6 1382 aaKnown RBP10.02□□□□□ -0.8
ATM-206ENST00000525056 CCER1Q8TC90 406 aaPredicted RBP10.02□□□□□ -0.81
ATM-206ENST00000525056 PCDHGA4Q9Y5G9 962 aa10.02□□□□□ -0.81
ATM-206ENST00000525056 WDR97A6NE52 1622 aa10.02□□□□□ -0.81
ATM-206ENST00000525056 CUX1P39880 1505 aa10.02□□□□□ -0.81
ATM-206ENST00000525056 SOGA1O94964 1423 aa10.01□□□□□ -0.81
ATM-206ENST00000525056 ST18O60284 1047 aa10.01□□□□□ -0.81
ATM-206ENST00000525056 TBC1D12O60347 775 aa10.01□□□□□ -0.81
ATM-206ENST00000525056 ARSIQ5FYB1 569 aa10.01□□□□□ -0.81
ATM-206ENST00000525056 GPR153Q6NV75 609 aa10.01□□□□□ -0.81
ATM-206ENST00000525056 FGD5Q6ZNL6 1462 aa10.01□□□□□ -0.81
ATM-206ENST00000525056 ARHGEF11O15085 1522 aa10.01□□□□□ -0.81
ATM-206ENST00000525056 FAM9AQ8IZU1 332 aaPredicted RBP10□□□□□ -0.81
ATM-206ENST00000525056 MAP3K9P80192 1104 aa9.99□□□□□ -0.81
ATM-206ENST00000525056 KCNV2Q8TDN2 545 aa9.99□□□□□ -0.81
ATM-206ENST00000525056 PBRM1Q86U86 1689 aa9.99□□□□□ -0.81
ATM-206ENST00000525056 HOXB1P14653 301 aaPredicted RBP9.98□□□□□ -0.81
ATM-206ENST00000525056 CYB5RLQ6IPT4 315 aa9.98□□□□□ -0.81
ATM-206ENST00000525056 P3H3Q8IVL6 736 aa9.98□□□□□ -0.81
ATM-206ENST00000525056 KHSRPQ92945 711 aaKnown RBP eCLIP9.98□□□□□ -0.818e-7■■■■□ 24
ATM-206ENST00000525056 DPYSL4O14531 572 aa9.97□□□□□ -0.81
ATM-206ENST00000525056 ARIH1Q9Y4X5 557 aaPredicted RBP9.97□□□□□ -0.81
ATM-206ENST00000525056 CLSPNQ9HAW4 1339 aa9.97□□□□□ -0.81
ATM-206ENST00000525056 ACIN1Q9UKV3 1341 aaKnown RBP9.97□□□□□ -0.81
ATM-206ENST00000525056 LCE2DQ5TA82 110 aaPredicted RBP9.96□□□□□ -0.82
ATM-206ENST00000525056 ARHGEF1Q92888 912 aaKnown RBP9.96□□□□□ -0.82
ATM-206ENST00000525056 SNAPC4Q5SXM2 1469 aa9.96□□□□□ -0.82
ATM-206ENST00000525056 NUDT7P0C024 238 aa9.94□□□□□ -0.82
ATM-206ENST00000525056 CHMP7Q8WUX9 453 aaPredicted RBP9.94□□□□□ -0.82
ATM-206ENST00000525056 KDM4FA0A1W2PPD8 638 aa9.93□□□□□ -0.82
ATM-206ENST00000525056 EVI5O60447 810 aa9.93□□□□□ -0.82
ATM-206ENST00000525056 CLASP1Q7Z460 1538 aa9.92□□□□□ -0.82
ATM-206ENST00000525056 DIEXFQ68CQ4 756 aaKnown RBP9.92□□□□□ -0.82
ATM-206ENST00000525056 MARVELD3Q96A59 401 aa9.92□□□□□ -0.82
ATM-206ENST00000525056 ANO8Q9HCE9 1232 aaPredicted RBP9.91□□□□□ -0.82
ATM-206ENST00000525056 ABCA5Q8WWZ7 1642 aa9.91□□□□□ -0.82
ATM-206ENST00000525056 ARAP1Q96P48 1450 aa9.91□□□□□ -0.82
ATM-206ENST00000525056 SPDYE16A6NNV3 312 aaPredicted RBP9.9□□□□□ -0.82
ATM-206ENST00000525056 GRIN2BQ13224 1484 aa9.9□□□□□ -0.83
ATM-206ENST00000525056 VPS8Q8N3P4 1428 aa9.9□□□□□ -0.83
ATM-206ENST00000525056 ERICH3Q5RHP9 1530 aa9.89□□□□□ -0.83
ATM-206ENST00000525056 PDIA6Q15084 440 aa9.89□□□□□ -0.83
ATM-206ENST00000525056 GAPVD1Q14C86 1478 aa9.89□□□□□ -0.83
ATM-206ENST00000525056 MAGI1Q96QZ7 1491 aaPredicted RBP9.89□□□□□ -0.83
ATM-206ENST00000525056 BIVM-ERCC5R4GMW8 1640 aa9.89□□□□□ -0.83
ATM-206ENST00000525056 SYNJ1O43426 1573 aa9.88□□□□□ -0.83
ATM-206ENST00000525056 ZNF316A6NFI3 1004 aaPredicted RBP9.88□□□□□ -0.83
ATM-206ENST00000525056 EMP3P54852 163 aa9.88□□□□□ -0.83
ATM-206ENST00000525056 LHX6Q9UPM6 363 aa9.87□□□□□ -0.83
ATM-206ENST00000525056 SYNJ2O15056 1496 aa9.85□□□□□ -0.83
ATM-206ENST00000525056 ERBB3P21860 1342 aa9.85□□□□□ -0.83
ATM-206ENST00000525056 ABCA10Q8WWZ4 1543 aa9.85□□□□□ -0.83
ATM-206ENST00000525056 TOP2BQ02880 1626 aa9.85□□□□□ -0.83
ATM-206ENST00000525056 CLIP1P30622 1438 aa9.84□□□□□ -0.83
ATM-206ENST00000525056 FAM205CA6NFA0 338 aa9.84□□□□□ -0.83
ATM-206ENST00000525056 PTGER2P43116 358 aa9.83□□□□□ -0.84
ATM-206ENST00000525056 ADAMTS12P58397 1594 aa9.83□□□□□ -0.84
ATM-206ENST00000525056 PSDA5PKW4 1024 aaPredicted RBP9.81□□□□□ -0.84
ATM-206ENST00000525056 SEMA3EO15041 775 aa9.81□□□□□ -0.84
ATM-206ENST00000525056 UBTFP17480 764 aaKnown RBP9.81□□□□□ -0.84
ATM-206ENST00000525056 VARS2Q5ST30 1063 aaKnown RBP9.81□□□□□ -0.84
ATM-206ENST00000525056 POTEB3A0JP26 581 aa9.8□□□□□ -0.84
ATM-206ENST00000525056 FOSBP53539 338 aa9.8□□□□□ -0.84
ATM-206ENST00000525056 POTEBQ6S5H4 581 aa9.8□□□□□ -0.84
ATM-206ENST00000525056 POTEGQ6S5H5 508 aa9.8□□□□□ -0.84
ATM-206ENST00000525056 DDX12PQ92771 950 aa9.8□□□□□ -0.84
ATM-206ENST00000525056 ERCC6L2Q5T890 1561 aa9.8□□□□□ -0.84
ATM-206ENST00000525056 POTEMA6NI47 508 aa9.79□□□□□ -0.84
ATM-206ENST00000525056 ZNF454Q8N9F8 522 aa9.79□□□□□ -0.84
ATM-206ENST00000525056 JPH4Q96JJ6 628 aa9.79□□□□□ -0.84
ATM-206ENST00000525056 HS3ST6Q96QI5 342 aa9.79□□□□□ -0.84
ATM-206ENST00000525056 CEP170Q5SW79 1584 aa9.79□□□□□ -0.84
ATM-206ENST00000525056 GRXCR2A6NFK2 248 aa9.78□□□□□ -0.84
ATM-206ENST00000525056 PHF14O94880 888 aa9.78□□□□□ -0.84
ATM-206ENST00000525056 MLLT3P42568 568 aaPredicted RBP9.78□□□□□ -0.84
ATM-206ENST00000525056 PCDHGA10Q9Y5H3 936 aa9.78□□□□□ -0.84
ATM-206ENST00000525056 GRIN2AQ12879 1464 aa9.78□□□□□ -0.84
ATM-206ENST00000525056 NEUROD1Q13562 356 aa9.77□□□□□ -0.85
ATM-206ENST00000525056 NBR1Q14596 966 aa9.77□□□□□ -0.85
ATM-206ENST00000525056 PPP4R3BQ5MIZ7 849 aa9.77□□□□□ -0.85
ATM-206ENST00000525056 SHROOM2Q13796 1616 aa9.77□□□□□ -0.85
ATM-206ENST00000525056 TESPA1A2RU30 521 aaPredicted RBP9.76□□□□□ -0.85
ATM-206ENST00000525056 EPAS1Q99814 870 aa9.76□□□□□ -0.85
ATM-206ENST00000525056 TYW1BQ6NUM6 668 aa9.75□□□□□ -0.85
ATM-206ENST00000525056 MAP3K1Q13233 1512 aa9.75□□□□□ -0.85
ATM-206ENST00000525056 ZNF687Q8N1G0 1237 aa9.74□□□□□ -0.85
ATM-206ENST00000525056 ZDHHC16Q969W1 377 aa9.74□□□□□ -0.85
ATM-206ENST00000525056 GTF3C3Q9Y5Q9 886 aa9.74□□□□□ -0.85
ATM-206ENST00000525056 FHAD1B1AJZ9 1412 aa9.73□□□□□ -0.85
ATM-206ENST00000525056 PRXQ9BXM0 1461 aa9.73□□□□□ -0.85
ATM-206ENST00000525056 OSBPP22059 807 aa9.73□□□□□ -0.85
ATM-206ENST00000525056 FBXW7Q969H0 707 aa9.73□□□□□ -0.85
ATM-206ENST00000525056 NUP160Q12769 1436 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms