RNA–Protein interactions for RNA: ENST00000525056.1

ATM-206, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 657 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-206ENST00000525056 AEBP2Q6ZN18 517 aaPredicted RBP22.05■■□□□ 1.12
ATM-206ENST00000525056 CHIC1Q5VXU3 224 aa21.51■■□□□ 1.03
ATM-206ENST00000525056 PHF23Q9BUL5 403 aaPredicted RBP18.93■□□□□ 0.62
ATM-206ENST00000525056 SENP3Q9H4L4 574 aaPredicted RBP18.7■□□□□ 0.58
ATM-206ENST00000525056 PLPPR3Q6T4P5 718 aa17.46■□□□□ 0.39
ATM-206ENST00000525056 FOXD1Q16676 465 aa17.37■□□□□ 0.37
ATM-206ENST00000525056 PPP6R1Q9UPN7 881 aa16.72■□□□□ 0.27
ATM-206ENST00000525056 ADRA2BP18089 450 aa16.7■□□□□ 0.26
ATM-206ENST00000525056 PIAS4Q8N2W9 510 aaPredicted RBP16.36■□□□□ 0.21
ATM-206ENST00000525056 MSH5O43196 834 aa16.01■□□□□ 0.15
ATM-206ENST00000525056 PPP4R3CPQ6ZMV5 832 aa15.39■□□□□ 0.05
ATM-206ENST00000525056 SCAF1Q9H7N4 1312 aaKnown RBP15.28■□□□□ 0.04
ATM-206ENST00000525056 MAPK8IP2Q13387 824 aaPredicted RBP15.16■□□□□ 0.02
ATM-206ENST00000525056 KCNA4P22459 653 aa15.02■□□□□ -0
ATM-206ENST00000525056 NCBP3Q53F19 620 aaKnown RBP14.99□□□□□ -0.01
ATM-206ENST00000525056 CNKSR2Q8WXI2 1034 aa14.96□□□□□ -0.01
ATM-206ENST00000525056 DMRT2Q9Y5R5 561 aa14.93□□□□□ -0.02
ATM-206ENST00000525056 NPM3O75607 178 aaKnown RBP14.76□□□□□ -0.05
ATM-206ENST00000525056 RNF216Q9NWF9 866 aaPredicted RBP14.67□□□□□ -0.06
ATM-206ENST00000525056 HOXD11P31277 338 aaPredicted RBP14.62□□□□□ -0.07
ATM-206ENST00000525056 POTEDQ86YR6 584 aa14.61□□□□□ -0.07
ATM-206ENST00000525056 DNAJC5BQ9UF47 199 aa14.34□□□□□ -0.11
ATM-206ENST00000525056 SLC4A1APQ9BWU0 796 aaKnown RBP14.3□□□□□ -0.12
ATM-206ENST00000525056 DCAF8L1A6NGE4 600 aa14.29□□□□□ -0.12
ATM-206ENST00000525056 SLC4A2P04920 1241 aa13.95□□□□□ -0.18
ATM-206ENST00000525056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.94□□□□□ -0.18
ATM-206ENST00000525056 EHMT2Q96KQ7 1210 aa13.87□□□□□ -0.19
ATM-206ENST00000525056 ZBTB22O15209 634 aa13.82□□□□□ -0.2
ATM-206ENST00000525056 FOXD4L1Q9NU39 408 aa13.81□□□□□ -0.2
ATM-206ENST00000525056 NISCHQ9Y2I1 1504 aa13.79□□□□□ -0.2
ATM-206ENST00000525056 CSRNP3Q8WYN3 585 aa13.73□□□□□ -0.21
ATM-206ENST00000525056 RNF39Q9H2S5 420 aa13.73□□□□□ -0.21
ATM-206ENST00000525056 U3KPZ7 1027 aaPredicted RBP13.7□□□□□ -0.22
ATM-206ENST00000525056 MYCNP04198 464 aaPredicted RBP13.63□□□□□ -0.23
ATM-206ENST00000525056 C1QBPQ07021 282 aaKnown RBP13.56□□□□□ -0.24
ATM-206ENST00000525056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.52□□□□□ -0.25
ATM-206ENST00000525056 HNRNPUL2Q1KMD3 747 aaKnown RBP13.52□□□□□ -0.25
ATM-206ENST00000525056 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
ATM-206ENST00000525056 CACNB1Q02641 598 aaPredicted RBP13.38□□□□□ -0.27
ATM-206ENST00000525056 APLP2Q06481 763 aa13.38□□□□□ -0.27
ATM-206ENST00000525056 ATXN8OSP0DMR3 200 aa13.35□□□□□ -0.27
ATM-206ENST00000525056 SPINK5Q9NQ38 1064 aaPredicted RBP13.33□□□□□ -0.28
ATM-206ENST00000525056 ATF5Q9Y2D1 282 aaPredicted RBP13.29□□□□□ -0.28
ATM-206ENST00000525056 CAPN15O75808 1086 aa13.28□□□□□ -0.28
ATM-206ENST00000525056 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.29
ATM-206ENST00000525056 ZNF219Q9P2Y4 722 aaPredicted RBP13.2□□□□□ -0.3
ATM-206ENST00000525056 DSG3P32926 999 aa13.06□□□□□ -0.32
ATM-206ENST00000525056 ABCB7O75027 752 aa13.02□□□□□ -0.33
ATM-206ENST00000525056 POLA2Q14181 598 aa13□□□□□ -0.33
ATM-206ENST00000525056 ZBTB12Q9Y330 459 aaPredicted RBP12.77□□□□□ -0.37
ATM-206ENST00000525056 FBLN2P98095 1184 aa12.72□□□□□ -0.37
ATM-206ENST00000525056 MKRN4PQ13434 485 aaPredicted RBP12.71□□□□□ -0.37
ATM-206ENST00000525056 OSCARQ8IYS5 282 aa12.54□□□□□ -0.4
ATM-206ENST00000525056 CCDC180Q9P1Z9 1646 aa12.45□□□□□ -0.42
ATM-206ENST00000525056 SPDYE2BA6NHP3 402 aa12.43□□□□□ -0.42
ATM-206ENST00000525056 SPDYE6P0CI01 402 aa12.43□□□□□ -0.42
ATM-206ENST00000525056 SPDYE2Q495Y8 402 aa12.43□□□□□ -0.42
ATM-206ENST00000525056 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
ATM-206ENST00000525056 SPDYE4A6NLX3 237 aa12.42□□□□□ -0.42
ATM-206ENST00000525056 FKBP8Q14318 412 aa12.41□□□□□ -0.42
ATM-206ENST00000525056 ABCC9O60706 1549 aa12.41□□□□□ -0.42
ATM-206ENST00000525056 ZNF692Q9BU19 519 aaPredicted RBP12.39□□□□□ -0.43
ATM-206ENST00000525056 SSUH2Q9Y2M2 353 aa12.33□□□□□ -0.44
ATM-206ENST00000525056 AKT1S1Q96B36 256 aa12.29□□□□□ -0.44
ATM-206ENST00000525056 PABPN1Q86U42 306 aaKnown RBP eCLIP12.22□□□□□ -0.45
ATM-206ENST00000525056 PROM2Q8N271 834 aa12.2□□□□□ -0.46
ATM-206ENST00000525056 REM2Q8IYK8 340 aaPredicted RBP12.18□□□□□ -0.46
ATM-206ENST00000525056 SPDYE1Q8NFV5 336 aaPredicted RBP12.07□□□□□ -0.48
ATM-206ENST00000525056 PITPNM1O00562 1244 aa12.03□□□□□ -0.48
ATM-206ENST00000525056 CLEC11AQ9Y240 323 aa12.02□□□□□ -0.49
ATM-206ENST00000525056 STAG3Q9UJ98 1225 aa12.01□□□□□ -0.49
ATM-206ENST00000525056 FBXO3Q9UK99 471 aa11.97□□□□□ -0.49
ATM-206ENST00000525056 CHRDL2Q6WN34 429 aa11.93□□□□□ -0.5
ATM-206ENST00000525056 PRR29P0C7W0 189 aa11.91□□□□□ -0.5
ATM-206ENST00000525056 VASPP50552 380 aaPredicted RBP11.81□□□□□ -0.52
ATM-206ENST00000525056 FXR2P51116 673 aaKnown RBP eCLIP11.81□□□□□ -0.52
ATM-206ENST00000525056 DCAF8L2P0C7V8 631 aa11.79□□□□□ -0.52
ATM-206ENST00000525056 MIER1Q8N108 512 aa11.78□□□□□ -0.52
ATM-206ENST00000525056 PIP4P2Q8N4L2 257 aa11.78□□□□□ -0.52
ATM-206ENST00000525056 RB1CC1Q8TDY2 1594 aa11.78□□□□□ -0.52
ATM-206ENST00000525056 PLCD3Q8N3E9 789 aa11.76□□□□□ -0.53
ATM-206ENST00000525056 CREBZFQ9NS37 354 aa11.76□□□□□ -0.53
ATM-206ENST00000525056 PRKAR2AP13861 404 aaKnown RBP11.73□□□□□ -0.53
ATM-206ENST00000525056 CHADLQ6NUI6 762 aa11.72□□□□□ -0.53
ATM-206ENST00000525056 PLEKHG5O94827 1062 aa11.71□□□□□ -0.53
ATM-206ENST00000525056 UNC13AQ9UPW8 1703 aa11.69□□□□□ -0.54
ATM-206ENST00000525056 NACADO15069 1562 aa11.68□□□□□ -0.54
ATM-206ENST00000525056 IFNLR1Q8IU57 520 aaPredicted RBP11.65□□□□□ -0.54
ATM-206ENST00000525056 MNX1P50219 401 aaPredicted RBP11.63□□□□□ -0.55
ATM-206ENST00000525056 KLHL34Q8N239 644 aa11.62□□□□□ -0.55
ATM-206ENST00000525056 FARP1Q9Y4F1 1045 aaPredicted RBP11.62□□□□□ -0.55
ATM-206ENST00000525056 ZBTB47Q9UFB7 747 aaPredicted RBP11.61□□□□□ -0.55
ATM-206ENST00000525056 POTEHQ6S545 545 aa11.57□□□□□ -0.56
ATM-206ENST00000525056 NPM1P06748 294 aaKnown RBP eCLIP11.56□□□□□ -0.56
ATM-206ENST00000525056 SPOCK2Q92563 424 aa11.52□□□□□ -0.57
ATM-206ENST00000525056 MYO15BQ96JP2 1530 aa11.5□□□□□ -0.57
ATM-206ENST00000525056 BICRAQ9NZM4 1560 aa11.49□□□□□ -0.57
ATM-206ENST00000525056 NUBP1P53384 320 aa11.48□□□□□ -0.57
ATM-206ENST00000525056 RASEFQ8IZ41 740 aa11.43□□□□□ -0.58
ATM-206ENST00000525056 ZCCHC6Q5VYS8 1495 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms