RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 POTEEQ6S8J3 1075 aa10.08□□□□□ -0.8
FAM49B-218ENST00000520887 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.08□□□□□ -0.8
FAM49B-218ENST00000520887 AXIN2Q9Y2T1 843 aa10.08□□□□□ -0.8
FAM49B-218ENST00000520887 SPRYD3Q8NCJ5 442 aa10.07□□□□□ -0.8
FAM49B-218ENST00000520887 TOPBP1Q92547 1522 aa10.07□□□□□ -0.8
FAM49B-218ENST00000520887 PPP4R3BQ5MIZ7 849 aa10.06□□□□□ -0.8
FAM49B-218ENST00000520887 URB2Q14146 1524 aaKnown RBP10.06□□□□□ -0.8
FAM49B-218ENST00000520887 ARHGAP33O14559 1287 aa10.05□□□□□ -0.8
FAM49B-218ENST00000520887 PTGER2P43116 358 aa10.05□□□□□ -0.8
FAM49B-218ENST00000520887 MYT1LQ9UL68 1186 aa10.05□□□□□ -0.8
FAM49B-218ENST00000520887 WRNQ14191 1432 aaPredicted RBP eCLIP10.05□□□□□ -0.8
FAM49B-218ENST00000520887 MAP3K9P80192 1104 aa10.03□□□□□ -0.8
FAM49B-218ENST00000520887 RNF166Q96A37 237 aaPredicted RBP10.03□□□□□ -0.8
FAM49B-218ENST00000520887 IFT140Q96RY7 1462 aa10.03□□□□□ -0.8
FAM49B-218ENST00000520887 ANO8Q9HCE9 1232 aaPredicted RBP10.02□□□□□ -0.81
FAM49B-218ENST00000520887 EVI5O60447 810 aa10.01□□□□□ -0.81
FAM49B-218ENST00000520887 EMILIN3Q9NT22 766 aa10.01□□□□□ -0.81
FAM49B-218ENST00000520887 ZNF454Q8N9F8 522 aa10□□□□□ -0.81
FAM49B-218ENST00000520887 FGD5Q6ZNL6 1462 aa9.99□□□□□ -0.81
FAM49B-218ENST00000520887 CUX1P39880 1505 aa9.99□□□□□ -0.81
FAM49B-218ENST00000520887 PSEN2P49810 448 aa9.99□□□□□ -0.81
FAM49B-218ENST00000520887 PAXIP1Q6ZW49 1069 aaPredicted RBP9.99□□□□□ -0.81
FAM49B-218ENST00000520887 TOP2BQ02880 1626 aa9.99□□□□□ -0.81
FAM49B-218ENST00000520887 BIVM-ERCC5R4GMW8 1640 aa9.99□□□□□ -0.81
FAM49B-218ENST00000520887 WDR97A6NE52 1622 aa9.98□□□□□ -0.81
FAM49B-218ENST00000520887 CFAP44Q96MT7 982 aa9.98□□□□□ -0.81
FAM49B-218ENST00000520887 POLA1P09884 1462 aaPredicted RBP9.98□□□□□ -0.81
FAM49B-218ENST00000520887 FOSBP53539 338 aa9.97□□□□□ -0.81
FAM49B-218ENST00000520887 KCNH8Q96L42 1107 aa9.97□□□□□ -0.81
FAM49B-218ENST00000520887 SOGA1O94964 1423 aa9.97□□□□□ -0.81
FAM49B-218ENST00000520887 TK2O00142 265 aa9.96□□□□□ -0.82
FAM49B-218ENST00000520887 SLC24A1O60721 1099 aa9.96□□□□□ -0.82
FAM49B-218ENST00000520887 DMRTA1Q5VZB9 504 aa9.96□□□□□ -0.82
FAM49B-218ENST00000520887 ADGRD1Q6QNK2 874 aa9.96□□□□□ -0.82
FAM49B-218ENST00000520887 CAMK2BQ13554 666 aa9.95□□□□□ -0.82
FAM49B-218ENST00000520887 KCNK17Q96T54 332 aa9.95□□□□□ -0.82
FAM49B-218ENST00000520887 SYNJ1O43426 1573 aa9.94□□□□□ -0.82
FAM49B-218ENST00000520887 JPH4Q96JJ6 628 aa9.94□□□□□ -0.82
FAM49B-218ENST00000520887 BCL2L12Q9HB09 334 aa9.94□□□□□ -0.82
FAM49B-218ENST00000520887 ZDHHC16Q969W1 377 aa9.92□□□□□ -0.82
FAM49B-218ENST00000520887 EIF4G3O43432 1585 aaKnown RBP9.92□□□□□ -0.82
FAM49B-218ENST00000520887 TARBP1Q13395 1621 aaKnown RBP9.91□□□□□ -0.82
FAM49B-218ENST00000520887 PTPREP23469 700 aa9.9□□□□□ -0.82
FAM49B-218ENST00000520887 ABCA10Q8WWZ4 1543 aa9.9□□□□□ -0.82
FAM49B-218ENST00000520887 RAD54L2Q9Y4B4 1467 aa9.9□□□□□ -0.83
FAM49B-218ENST00000520887 DPYSL4O14531 572 aa9.89□□□□□ -0.83
FAM49B-218ENST00000520887 HRO43593 1189 aa9.89□□□□□ -0.83
FAM49B-218ENST00000520887 PLCB2Q00722 1185 aa9.88□□□□□ -0.83
FAM49B-218ENST00000520887 STAC3Q96MF2 364 aa9.88□□□□□ -0.83
FAM49B-218ENST00000520887 ADAM33Q9BZ11 813 aa9.88□□□□□ -0.83
FAM49B-218ENST00000520887 PCDHGA10Q9Y5H3 936 aa9.88□□□□□ -0.83
FAM49B-218ENST00000520887 GRIN2BQ13224 1484 aa9.87□□□□□ -0.83
FAM49B-218ENST00000520887 VPS9D1Q9Y2B5 631 aa9.87□□□□□ -0.83
FAM49B-218ENST00000520887 PBRM1Q86U86 1689 aa9.87□□□□□ -0.83
FAM49B-218ENST00000520887 GAPVD1Q14C86 1478 aa9.86□□□□□ -0.83
FAM49B-218ENST00000520887 KIF27Q86VH2 1401 aa9.86□□□□□ -0.83
FAM49B-218ENST00000520887 SLC4A5Q9BY07 1137 aa9.86□□□□□ -0.83
FAM49B-218ENST00000520887 WDR70Q9NW82 654 aa9.86□□□□□ -0.83
FAM49B-218ENST00000520887 ZNF608Q9ULD9 1512 aaPredicted RBP9.86□□□□□ -0.83
FAM49B-218ENST00000520887 PHF14O94880 888 aa9.85□□□□□ -0.83
FAM49B-218ENST00000520887 TDRD9Q8NDG6 1382 aaKnown RBP9.85□□□□□ -0.83
FAM49B-218ENST00000520887 MAGI1Q96QZ7 1491 aaPredicted RBP9.85□□□□□ -0.83
FAM49B-218ENST00000520887 TYW1BQ6NUM6 668 aa9.84□□□□□ -0.83
FAM49B-218ENST00000520887 FBXW7Q969H0 707 aa9.84□□□□□ -0.83
FAM49B-218ENST00000520887 ABCA5Q8WWZ7 1642 aa9.84□□□□□ -0.83
FAM49B-218ENST00000520887 AQRO60306 1485 aaKnown RBP eCLIP9.84□□□□□ -0.83
FAM49B-218ENST00000520887 E2F4Q16254 413 aa9.83□□□□□ -0.84
FAM49B-218ENST00000520887 ZBED2Q9BTP6 218 aa9.83□□□□□ -0.84
FAM49B-218ENST00000520887 ERICH3Q5RHP9 1530 aa9.82□□□□□ -0.84
FAM49B-218ENST00000520887 EPAS1Q99814 870 aa9.82□□□□□ -0.84
FAM49B-218ENST00000520887 SNAPC4Q5SXM2 1469 aa9.82□□□□□ -0.84
FAM49B-218ENST00000520887 CUL7Q14999 1698 aa9.8□□□□□ -0.84
FAM49B-218ENST00000520887 CHMP7Q8WUX9 453 aaPredicted RBP9.8□□□□□ -0.84
FAM49B-218ENST00000520887 HCSTQ9UBK5 93 aa9.8□□□□□ -0.84
FAM49B-218ENST00000520887 SPDYE16A6NNV3 312 aaPredicted RBP9.79□□□□□ -0.84
FAM49B-218ENST00000520887 PPP1R3GB7ZBB8 358 aa9.79□□□□□ -0.84
FAM49B-218ENST00000520887 DDX12PQ92771 950 aa9.79□□□□□ -0.84
FAM49B-218ENST00000520887 EEA1Q15075 1411 aa9.79□□□□□ -0.84
FAM49B-218ENST00000520887 SYNJ2O15056 1496 aa9.79□□□□□ -0.84
FAM49B-218ENST00000520887 BHMG1C9JSJ3 638 aaPredicted RBP9.78□□□□□ -0.84
FAM49B-218ENST00000520887 PDIA6Q15084 440 aa9.78□□□□□ -0.84
FAM49B-218ENST00000520887 KCTD12Q96CX2 325 aaKnown RBP9.78□□□□□ -0.84
FAM49B-218ENST00000520887 CHD1O14646 1710 aa9.77□□□□□ -0.85
FAM49B-218ENST00000520887 ADAMTS12P58397 1594 aa9.77□□□□□ -0.85
FAM49B-218ENST00000520887 FHAD1B1AJZ9 1412 aa9.77□□□□□ -0.85
FAM49B-218ENST00000520887 COL9A1P20849 921 aa9.76□□□□□ -0.85
FAM49B-218ENST00000520887 C6orf132Q5T0Z8 1188 aa9.76□□□□□ -0.85
FAM49B-218ENST00000520887 ARIH1Q9Y4X5 557 aaPredicted RBP9.76□□□□□ -0.85
FAM49B-218ENST00000520887 MRPL50Q8N5N7 158 aaKnown RBP9.75□□□□□ -0.85
FAM49B-218ENST00000520887 RBM33Q96EV2 1170 aaKnown RBP9.75□□□□□ -0.85
FAM49B-218ENST00000520887 TSHZ2Q9NRE2 1034 aa9.75□□□□□ -0.85
FAM49B-218ENST00000520887 GOLGA8CPA6NN73 597 aa9.74□□□□□ -0.85
FAM49B-218ENST00000520887 NBPF3Q9H094 633 aa9.74□□□□□ -0.85
FAM49B-218ENST00000520887 PROX2Q3B8N5 592 aa9.73□□□□□ -0.85
FAM49B-218ENST00000520887 NBR1Q14596 966 aa9.72□□□□□ -0.85
FAM49B-218ENST00000520887 RABGEF1Q9UJ41 708 aa9.72□□□□□ -0.85
FAM49B-218ENST00000520887 GRIN2AQ12879 1464 aa9.72□□□□□ -0.85
FAM49B-218ENST00000520887 HAP1P54257 671 aaPredicted RBP9.7□□□□□ -0.86
FAM49B-218ENST00000520887 CARMIL1Q5VZK9 1371 aa9.7□□□□□ -0.86
FAM49B-218ENST00000520887 GRXCR2A6NFK2 248 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms