RNA–Protein interactions for RNA: ENST00000518223.1

EXTL3-204, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 562 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-204ENST00000518223 ZNF454Q8N9F8 522 aa8.46□□□□□ -1.06
EXTL3-204ENST00000518223 KCNK17Q96T54 332 aa8.46□□□□□ -1.06
EXTL3-204ENST00000518223 PSDA5PKW4 1024 aaPredicted RBP8.45□□□□□ -1.06
EXTL3-204ENST00000518223 ADGRD1Q6QNK2 874 aa8.44□□□□□ -1.06
EXTL3-204ENST00000518223 CCDC88BA6NC98 1476 aa8.44□□□□□ -1.06
EXTL3-204ENST00000518223 EMILIN3Q9NT22 766 aa8.43□□□□□ -1.06
EXTL3-204ENST00000518223 EVI5O60447 810 aa8.42□□□□□ -1.06
EXTL3-204ENST00000518223 PTGER2P43116 358 aa8.42□□□□□ -1.06
EXTL3-204ENST00000518223 MFSD10Q14728 455 aa8.42□□□□□ -1.06
EXTL3-204ENST00000518223 URB2Q14146 1524 aaKnown RBP8.41□□□□□ -1.06
EXTL3-204ENST00000518223 MAP3K9P80192 1104 aa8.41□□□□□ -1.06
EXTL3-204ENST00000518223 AMER1Q5JTC6 1135 aaPredicted RBP8.4□□□□□ -1.06
EXTL3-204ENST00000518223 BBXQ8WY36 941 aaPredicted RBP8.4□□□□□ -1.06
EXTL3-204ENST00000518223 FOSBP53539 338 aa8.38□□□□□ -1.07
EXTL3-204ENST00000518223 IFT140Q96RY7 1462 aa8.38□□□□□ -1.07
EXTL3-204ENST00000518223 ABCC8Q09428 1581 aa8.37□□□□□ -1.07
EXTL3-204ENST00000518223 KCNH8Q96L42 1107 aa8.36□□□□□ -1.07
EXTL3-204ENST00000518223 CFAP44Q96MT7 982 aa8.36□□□□□ -1.07
EXTL3-204ENST00000518223 ADAM33Q9BZ11 813 aa8.36□□□□□ -1.07
EXTL3-204ENST00000518223 TOPBP1Q92547 1522 aa8.35□□□□□ -1.07
EXTL3-204ENST00000518223 SUPT5HO00267 1087 aaKnown RBP8.35□□□□□ -1.07
EXTL3-204ENST00000518223 HRO43593 1189 aa8.35□□□□□ -1.07
EXTL3-204ENST00000518223 TK2O00142 265 aa8.34□□□□□ -1.07
EXTL3-204ENST00000518223 DPYSL4O14531 572 aa8.34□□□□□ -1.07
EXTL3-204ENST00000518223 PAXIP1Q6ZW49 1069 aaPredicted RBP8.34□□□□□ -1.07
EXTL3-204ENST00000518223 SPRYD3Q8NCJ5 442 aa8.34□□□□□ -1.07
EXTL3-204ENST00000518223 KCTD12Q96CX2 325 aaKnown RBP8.34□□□□□ -1.07
EXTL3-204ENST00000518223 JPH4Q96JJ6 628 aa8.34□□□□□ -1.07
EXTL3-204ENST00000518223 BCL2L12Q9HB09 334 aa8.34□□□□□ -1.07
EXTL3-204ENST00000518223 ANO8Q9HCE9 1232 aaPredicted RBP8.34□□□□□ -1.07
EXTL3-204ENST00000518223 PRDM2Q13029 1718 aa8.33□□□□□ -1.08
EXTL3-204ENST00000518223 ZDHHC16Q969W1 377 aa8.33□□□□□ -1.08
EXTL3-204ENST00000518223 STAC3Q96MF2 364 aa8.33□□□□□ -1.08
EXTL3-204ENST00000518223 VPS9D1Q9Y2B5 631 aa8.33□□□□□ -1.08
EXTL3-204ENST00000518223 ZNF608Q9ULD9 1512 aaPredicted RBP8.33□□□□□ -1.08
EXTL3-204ENST00000518223 PTPREP23469 700 aa8.32□□□□□ -1.08
EXTL3-204ENST00000518223 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.32□□□□□ -1.08
EXTL3-204ENST00000518223 PCDHGA10Q9Y5H3 936 aa8.31□□□□□ -1.08
EXTL3-204ENST00000518223 CYB5RLQ6IPT4 315 aa8.3□□□□□ -1.08
EXTL3-204ENST00000518223 AQRO60306 1485 aaKnown RBP eCLIP8.3□□□□□ -1.08
EXTL3-204ENST00000518223 DNMBPQ6XZF7 1577 aa8.3□□□□□ -1.08
EXTL3-204ENST00000518223 SOGA1O94964 1423 aa8.29□□□□□ -1.08
EXTL3-204ENST00000518223 CAMK2BQ13554 666 aa8.29□□□□□ -1.08
EXTL3-204ENST00000518223 ZBED2Q9BTP6 218 aa8.29□□□□□ -1.08
EXTL3-204ENST00000518223 TDRD9Q8NDG6 1382 aaKnown RBP8.28□□□□□ -1.08
EXTL3-204ENST00000518223 COL9A1P20849 921 aa8.28□□□□□ -1.08
EXTL3-204ENST00000518223 CHMP7Q8WUX9 453 aaPredicted RBP8.28□□□□□ -1.08
EXTL3-204ENST00000518223 DDX12PQ92771 950 aa8.28□□□□□ -1.08
EXTL3-204ENST00000518223 HCSTQ9UBK5 93 aa8.28□□□□□ -1.08
EXTL3-204ENST00000518223 PTPN5P54829 565 aa8.27□□□□□ -1.09
EXTL3-204ENST00000518223 PROX2Q3B8N5 592 aa8.27□□□□□ -1.09
EXTL3-204ENST00000518223 RBM33Q96EV2 1170 aaKnown RBP8.27□□□□□ -1.09
EXTL3-204ENST00000518223 EIF4G3O43432 1585 aaKnown RBP8.26□□□□□ -1.09
EXTL3-204ENST00000518223 POLA1P09884 1462 aaPredicted RBP8.26□□□□□ -1.09
EXTL3-204ENST00000518223 RAD54L2Q9Y4B4 1467 aa8.26□□□□□ -1.09
EXTL3-204ENST00000518223 TYW1BQ6NUM6 668 aa8.25□□□□□ -1.09
EXTL3-204ENST00000518223 PLA2G2EQ9NZK7 142 aa8.25□□□□□ -1.09
EXTL3-204ENST00000518223 PHF14O94880 888 aa8.24□□□□□ -1.09
EXTL3-204ENST00000518223 GOLGA8CPA6NN73 597 aa8.23□□□□□ -1.09
EXTL3-204ENST00000518223 BHMG1C9JSJ3 638 aaPredicted RBP8.23□□□□□ -1.09
EXTL3-204ENST00000518223 MRPL50Q8N5N7 158 aaKnown RBP8.23□□□□□ -1.09
EXTL3-204ENST00000518223 SLC4A5Q9BY07 1137 aa8.23□□□□□ -1.09
EXTL3-204ENST00000518223 ARHGEF11O15085 1522 aa8.23□□□□□ -1.09
EXTL3-204ENST00000518223 RIMBP3CA6NJZ7 1639 aa8.22□□□□□ -1.09
EXTL3-204ENST00000518223 RIMBP3BA6NNM3 1639 aa8.22□□□□□ -1.09
EXTL3-204ENST00000518223 RIMBP3Q9UFD9 1639 aa8.22□□□□□ -1.09
EXTL3-204ENST00000518223 FGD5Q6ZNL6 1462 aa8.22□□□□□ -1.09
EXTL3-204ENST00000518223 PPP1R3GB7ZBB8 358 aa8.22□□□□□ -1.09
EXTL3-204ENST00000518223 WNT2BQ93097 391 aa8.21□□□□□ -1.1
EXTL3-204ENST00000518223 TARBP1Q13395 1621 aaKnown RBP8.21□□□□□ -1.1
EXTL3-204ENST00000518223 NBR1Q14596 966 aa8.2□□□□□ -1.1
EXTL3-204ENST00000518223 FBXW7Q969H0 707 aa8.2□□□□□ -1.1
EXTL3-204ENST00000518223 SNAPC4Q5SXM2 1469 aa8.19□□□□□ -1.1
EXTL3-204ENST00000518223 E2F4Q16254 413 aa8.19□□□□□ -1.1
EXTL3-204ENST00000518223 C6orf132Q5T0Z8 1188 aa8.19□□□□□ -1.1
EXTL3-204ENST00000518223 THSD4Q6ZMP0 1018 aa8.19□□□□□ -1.1
EXTL3-204ENST00000518223 WDR70Q9NW82 654 aa8.19□□□□□ -1.1
EXTL3-204ENST00000518223 GRIN2BQ13224 1484 aa8.19□□□□□ -1.1
EXTL3-204ENST00000518223 TSR1Q2NL82 804 aaKnown RBP8.18□□□□□ -1.1
EXTL3-204ENST00000518223 EPAS1Q99814 870 aa8.18□□□□□ -1.1
EXTL3-204ENST00000518223 NBPF3Q9H094 633 aa8.18□□□□□ -1.1
EXTL3-204ENST00000518223 KIAA1468Q9P260 1216 aa8.18□□□□□ -1.1
EXTL3-204ENST00000518223 SEPT9Q9UHD8 586 aaPredicted RBP8.18□□□□□ -1.1
EXTL3-204ENST00000518223 CUX1P39880 1505 aa8.18□□□□□ -1.1
EXTL3-204ENST00000518223 CHD1O14646 1710 aa8.17□□□□□ -1.1
EXTL3-204ENST00000518223 MAP3K7O43318 606 aa8.17□□□□□ -1.1
EXTL3-204ENST00000518223 MAGI1Q96QZ7 1491 aaPredicted RBP8.17□□□□□ -1.1
EXTL3-204ENST00000518223 GRXCR2A6NFK2 248 aa8.16□□□□□ -1.1
EXTL3-204ENST00000518223 PRIM1P49642 420 aaKnown RBP8.16□□□□□ -1.1
EXTL3-204ENST00000518223 GAPVD1Q14C86 1478 aa8.16□□□□□ -1.1
EXTL3-204ENST00000518223 PDIA6Q15084 440 aa8.16□□□□□ -1.1
EXTL3-204ENST00000518223 TSHZ2Q9NRE2 1034 aa8.16□□□□□ -1.1
EXTL3-204ENST00000518223 RABGEF1Q9UJ41 708 aa8.16□□□□□ -1.1
EXTL3-204ENST00000518223 SYNJ1O43426 1573 aa8.15□□□□□ -1.1
EXTL3-204ENST00000518223 WRNQ14191 1432 aaPredicted RBP eCLIP8.15□□□□□ -1.1
EXTL3-204ENST00000518223 BCAMP50895 628 aa8.15□□□□□ -1.1
EXTL3-204ENST00000518223 WDR97A6NE52 1622 aa8.14□□□□□ -1.11
EXTL3-204ENST00000518223 SYNJ2O15056 1496 aa8.14□□□□□ -1.11
EXTL3-204ENST00000518223 ARAP1Q96P48 1450 aa8.13□□□□□ -1.11
EXTL3-204ENST00000518223 EN1Q05925 392 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms