RNA–Protein interactions for RNA: ENST00000518223.1

EXTL3-204, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 562 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-204ENST00000518223 AEBP2Q6ZN18 517 aaPredicted RBP19.96■□□□□ 0.79
EXTL3-204ENST00000518223 CHIC1Q5VXU3 224 aa18.99■□□□□ 0.63
EXTL3-204ENST00000518223 SENP3Q9H4L4 574 aaPredicted RBP16.91■□□□□ 0.3
EXTL3-204ENST00000518223 PHF23Q9BUL5 403 aaPredicted RBP16.76■□□□□ 0.27
EXTL3-204ENST00000518223 FOXD1Q16676 465 aa15.82■□□□□ 0.12
EXTL3-204ENST00000518223 PLPPR3Q6T4P5 718 aa15.2■□□□□ 0.02
EXTL3-204ENST00000518223 PPP6R1Q9UPN7 881 aa14.92□□□□□ -0.02
EXTL3-204ENST00000518223 ADRA2BP18089 450 aa14.91□□□□□ -0.02
EXTL3-204ENST00000518223 PIAS4Q8N2W9 510 aaPredicted RBP14.83□□□□□ -0.04
EXTL3-204ENST00000518223 MSH5O43196 834 aa14.67□□□□□ -0.06
EXTL3-204ENST00000518223 POTEDQ86YR6 584 aa14.21□□□□□ -0.13
EXTL3-204ENST00000518223 MAPK8IP2Q13387 824 aaPredicted RBP13.67□□□□□ -0.22
EXTL3-204ENST00000518223 SCAF1Q9H7N4 1312 aaKnown RBP13.47□□□□□ -0.25
EXTL3-204ENST00000518223 DMRT2Q9Y5R5 561 aa13.44□□□□□ -0.26
EXTL3-204ENST00000518223 PPP4R3CPQ6ZMV5 832 aa13.4□□□□□ -0.26
EXTL3-204ENST00000518223 CNKSR2Q8WXI2 1034 aa13.06□□□□□ -0.32
EXTL3-204ENST00000518223 DCAF8L1A6NGE4 600 aa13.03□□□□□ -0.32
EXTL3-204ENST00000518223 HOXD11P31277 338 aaPredicted RBP12.96□□□□□ -0.33
EXTL3-204ENST00000518223 RNF216Q9NWF9 866 aaPredicted RBP12.9□□□□□ -0.34
EXTL3-204ENST00000518223 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
EXTL3-204ENST00000518223 NPM3O75607 178 aaKnown RBP12.74□□□□□ -0.37
EXTL3-204ENST00000518223 KCNA4P22459 653 aa12.65□□□□□ -0.38
EXTL3-204ENST00000518223 CACNB1Q02641 598 aaPredicted RBP12.61□□□□□ -0.39
EXTL3-204ENST00000518223 RNF39Q9H2S5 420 aa12.56□□□□□ -0.4
EXTL3-204ENST00000518223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.43□□□□□ -0.42
EXTL3-204ENST00000518223 DNAJC5BQ9UF47 199 aa12.35□□□□□ -0.43
EXTL3-204ENST00000518223 C1QBPQ07021 282 aaKnown RBP12.34□□□□□ -0.43
EXTL3-204ENST00000518223 U3KPZ7 1027 aaPredicted RBP12.18□□□□□ -0.46
EXTL3-204ENST00000518223 SLC4A2P04920 1241 aa12.14□□□□□ -0.47
EXTL3-204ENST00000518223 SPINK5Q9NQ38 1064 aaPredicted RBP12.02□□□□□ -0.49
EXTL3-204ENST00000518223 CAPN15O75808 1086 aa11.98□□□□□ -0.49
EXTL3-204ENST00000518223 SLC4A1APQ9BWU0 796 aaKnown RBP11.93□□□□□ -0.5
EXTL3-204ENST00000518223 TRHP20396 242 aaPredicted RBP11.84□□□□□ -0.51
EXTL3-204ENST00000518223 DSG3P32926 999 aa11.82□□□□□ -0.52
EXTL3-204ENST00000518223 ABCB7O75027 752 aa11.77□□□□□ -0.53
EXTL3-204ENST00000518223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.76□□□□□ -0.53
EXTL3-204ENST00000518223 HNRNPUL2Q1KMD3 747 aaKnown RBP11.76□□□□□ -0.53
EXTL3-204ENST00000518223 MYCNP04198 464 aaPredicted RBP11.73□□□□□ -0.53
EXTL3-204ENST00000518223 SAMD1Q6SPF0 538 aaPredicted RBP11.73□□□□□ -0.53
EXTL3-204ENST00000518223 APLP2Q06481 763 aa11.72□□□□□ -0.53
EXTL3-204ENST00000518223 ZNF219Q9P2Y4 722 aaPredicted RBP11.69□□□□□ -0.54
EXTL3-204ENST00000518223 FOXD4L1Q9NU39 408 aa11.68□□□□□ -0.54
EXTL3-204ENST00000518223 ZBTB22O15209 634 aa11.64□□□□□ -0.55
EXTL3-204ENST00000518223 ATF5Q9Y2D1 282 aaPredicted RBP11.57□□□□□ -0.56
EXTL3-204ENST00000518223 POLA2Q14181 598 aa11.51□□□□□ -0.57
EXTL3-204ENST00000518223 NISCHQ9Y2I1 1504 aa11.31□□□□□ -0.6
EXTL3-204ENST00000518223 ATXN8OSP0DMR3 200 aa11.23□□□□□ -0.61
EXTL3-204ENST00000518223 RBM42Q9BTD8 480 aaKnown RBP11.21□□□□□ -0.61
EXTL3-204ENST00000518223 EHMT2Q96KQ7 1210 aa11.2□□□□□ -0.62
EXTL3-204ENST00000518223 CSRNP3Q8WYN3 585 aa11.18□□□□□ -0.62
EXTL3-204ENST00000518223 OSCARQ8IYS5 282 aa11.17□□□□□ -0.62
EXTL3-204ENST00000518223 ZBTB12Q9Y330 459 aaPredicted RBP11.16□□□□□ -0.62
EXTL3-204ENST00000518223 POTEHQ6S545 545 aa11.15□□□□□ -0.62
EXTL3-204ENST00000518223 FBLN2P98095 1184 aa11.01□□□□□ -0.65
EXTL3-204ENST00000518223 MKRN4PQ13434 485 aaPredicted RBP11□□□□□ -0.65
EXTL3-204ENST00000518223 CHRDL2Q6WN34 429 aa10.99□□□□□ -0.65
EXTL3-204ENST00000518223 AKT1S1Q96B36 256 aa10.99□□□□□ -0.65
EXTL3-204ENST00000518223 REM2Q8IYK8 340 aaPredicted RBP10.96□□□□□ -0.65
EXTL3-204ENST00000518223 PITPNM1O00562 1244 aa10.87□□□□□ -0.67
EXTL3-204ENST00000518223 SPDYE2BA6NHP3 402 aa10.85□□□□□ -0.67
EXTL3-204ENST00000518223 SPDYE6P0CI01 402 aa10.85□□□□□ -0.67
EXTL3-204ENST00000518223 SPDYE2Q495Y8 402 aa10.85□□□□□ -0.67
EXTL3-204ENST00000518223 ZNF692Q9BU19 519 aaPredicted RBP10.82□□□□□ -0.68
EXTL3-204ENST00000518223 PIP4P2Q8N4L2 257 aa10.78□□□□□ -0.68
EXTL3-204ENST00000518223 CLEC11AQ9Y240 323 aa10.75□□□□□ -0.69
EXTL3-204ENST00000518223 SSUH2Q9Y2M2 353 aa10.74□□□□□ -0.69
EXTL3-204ENST00000518223 FXR2P51116 673 aaKnown RBP eCLIP10.68□□□□□ -0.7
EXTL3-204ENST00000518223 PABPN1Q86U42 306 aaKnown RBP eCLIP10.68□□□□□ -0.7
EXTL3-204ENST00000518223 SPDYE1Q8NFV5 336 aaPredicted RBP10.67□□□□□ -0.7
EXTL3-204ENST00000518223 PRKAR2AP13861 404 aaKnown RBP10.58□□□□□ -0.72
EXTL3-204ENST00000518223 HAX1O00165 279 aa10.57□□□□□ -0.72
EXTL3-204ENST00000518223 CHADLQ6NUI6 762 aa10.55□□□□□ -0.72
EXTL3-204ENST00000518223 SPDYE4A6NLX3 237 aa10.52□□□□□ -0.73
EXTL3-204ENST00000518223 PRR29P0C7W0 189 aa10.52□□□□□ -0.73
EXTL3-204ENST00000518223 EVX2Q03828 476 aa10.49□□□□□ -0.73
EXTL3-204ENST00000518223 SP7Q8TDD2 431 aaPredicted RBP10.49□□□□□ -0.73
EXTL3-204ENST00000518223 C19orf67A6NJJ6 358 aa10.34□□□□□ -0.75
EXTL3-204ENST00000518223 FARP1Q9Y4F1 1045 aaPredicted RBP10.32□□□□□ -0.76
EXTL3-204ENST00000518223 CREBZFQ9NS37 354 aa10.3□□□□□ -0.76
EXTL3-204ENST00000518223 STAG3Q9UJ98 1225 aa10.3□□□□□ -0.76
EXTL3-204ENST00000518223 CD44P16070 742 aaKnown RBP10.25□□□□□ -0.77
EXTL3-204ENST00000518223 ABCC9O60706 1549 aa10.22□□□□□ -0.77
EXTL3-204ENST00000518223 GABBR2O75899 941 aa10.2□□□□□ -0.78
EXTL3-204ENST00000518223 PROM2Q8N271 834 aa10.19□□□□□ -0.78
EXTL3-204ENST00000518223 FKBP8Q14318 412 aa10.17□□□□□ -0.78
EXTL3-204ENST00000518223 ZRANB1Q9UGI0 708 aa10.14□□□□□ -0.79
EXTL3-204ENST00000518223 MNX1P50219 401 aaPredicted RBP10.11□□□□□ -0.79
EXTL3-204ENST00000518223 CCDC180Q9P1Z9 1646 aa10.08□□□□□ -0.8
EXTL3-204ENST00000518223 NPM1P06748 294 aaKnown RBP eCLIP10.05□□□□□ -0.8
EXTL3-204ENST00000518223 PHF12Q96QT6 1004 aa10.05□□□□□ -0.8
EXTL3-204ENST00000518223 MIER1Q8N108 512 aa10.04□□□□□ -0.8
EXTL3-204ENST00000518223 ZNF579Q8NAF0 562 aaKnown RBP10.04□□□□□ -0.8
EXTL3-204ENST00000518223 PAK3O75914 559 aaPredicted RBP10.02□□□□□ -0.81
EXTL3-204ENST00000518223 POTEIP0CG38 1075 aa10.01□□□□□ -0.81
EXTL3-204ENST00000518223 GALR2O43603 387 aaPredicted RBP10□□□□□ -0.81
EXTL3-204ENST00000518223 TSPYL2Q9H2G4 693 aaPredicted RBP9.99□□□□□ -0.81
EXTL3-204ENST00000518223 PLCD3Q8N3E9 789 aa9.98□□□□□ -0.81
EXTL3-204ENST00000518223 DCBLD2Q96PD2 775 aa9.95□□□□□ -0.82
EXTL3-204ENST00000518223 PLEKHG5O94827 1062 aa9.94□□□□□ -0.82
EXTL3-204ENST00000518223 RASEFQ8IZ41 740 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms