RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 TRIM34Q9BYJ4 488 aa20.54■□□□□ 0.88
CDH6-205ENST00000514738 RB1CC1Q8TDY2 1594 aa20.53■□□□□ 0.88
CDH6-205ENST00000514738 IGSF3O75054 1194 aa20.53■□□□□ 0.88
CDH6-205ENST00000514738 BECN1Q14457 450 aa20.53■□□□□ 0.88
CDH6-205ENST00000514738 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.53■□□□□ 0.88
CDH6-205ENST00000514738 MRS2Q9HD23 443 aa20.53■□□□□ 0.88
CDH6-205ENST00000514738 CUX2O14529 1486 aa20.51■□□□□ 0.87
CDH6-205ENST00000514738 TRAK2O60296 914 aa20.51■□□□□ 0.87
CDH6-205ENST00000514738 FAM161AQ3B820 660 aa20.51■□□□□ 0.87
CDH6-205ENST00000514738 LOC102724159A0A0B4J2E5 919 aa20.51■□□□□ 0.87
CDH6-205ENST00000514738 MCM4P33991 863 aa20.51■□□□□ 0.87
CDH6-205ENST00000514738 PWP2Q15269 919 aaKnown RBP20.51■□□□□ 0.87
CDH6-205ENST00000514738 CCDC173Q0VFZ6 552 aa20.5■□□□□ 0.87
CDH6-205ENST00000514738 SASS6Q6UVJ0 657 aa20.5■□□□□ 0.87
CDH6-205ENST00000514738 EP400NLQ6ZTU2 488 aa20.5■□□□□ 0.87
CDH6-205ENST00000514738 EGFL6Q8IUX8 553 aa20.5■□□□□ 0.87
CDH6-205ENST00000514738 UBTFP17480 764 aaKnown RBP20.49■□□□□ 0.87
CDH6-205ENST00000514738 C8orf34Q49A92 452 aa20.49■□□□□ 0.87
CDH6-205ENST00000514738 ZNF592Q92610 1267 aa20.49■□□□□ 0.87
CDH6-205ENST00000514738 ANTXR1Q9H6X2 564 aa20.49■□□□□ 0.87
CDH6-205ENST00000514738 PPP1R9BQ96SB3 815 aa20.48■□□□□ 0.87
CDH6-205ENST00000514738 ZNF500O60304 480 aaPredicted RBP20.47■□□□□ 0.87
CDH6-205ENST00000514738 CAPN2P17655 700 aa20.47■□□□□ 0.87
CDH6-205ENST00000514738 NBPF1Q3BBV0 1214 aa20.46■□□□□ 0.87
CDH6-205ENST00000514738 RRP1P56182 461 aaKnown RBP20.46■□□□□ 0.87
CDH6-205ENST00000514738 TIGD1Q96MW7 591 aa20.46■□□□□ 0.87
CDH6-205ENST00000514738 TULP2O00295 520 aa20.45■□□□□ 0.86
CDH6-205ENST00000514738 XPCQ01831 940 aaPredicted RBP20.44■□□□□ 0.86
CDH6-205ENST00000514738 MLECQ14165 292 aa20.44■□□□□ 0.86
CDH6-205ENST00000514738 BANK1Q8NDB2 785 aa20.44■□□□□ 0.86
CDH6-205ENST00000514738 CSPP1Q1MSJ5 1256 aa20.44■□□□□ 0.86
CDH6-205ENST00000514738 TPRNQ4KMQ1 711 aa20.44■□□□□ 0.86
CDH6-205ENST00000514738 CLSTN1O94985 981 aa20.43■□□□□ 0.86
CDH6-205ENST00000514738 CCDC66A2RUB6 948 aa20.43■□□□□ 0.86
CDH6-205ENST00000514738 LMOD3Q0VAK6 560 aa20.42■□□□□ 0.86
CDH6-205ENST00000514738 ZNF710Q8N1W2 664 aa20.41■□□□□ 0.86
CDH6-205ENST00000514738 CFAP44Q96MT7 982 aa20.41■□□□□ 0.86
CDH6-205ENST00000514738 TSPYL1Q9H0U9 437 aa20.41■□□□□ 0.86
CDH6-205ENST00000514738 EFCC1Q9HA90 598 aa20.41■□□□□ 0.86
CDH6-205ENST00000514738 SPDYE4A6NLX3 237 aa20.4■□□□□ 0.86
CDH6-205ENST00000514738 TRHP20396 242 aaPredicted RBP20.4■□□□□ 0.86
CDH6-205ENST00000514738 GAS2L3Q86XJ1 694 aa20.4■□□□□ 0.86
CDH6-205ENST00000514738 KIF3AQ9Y496 699 aa20.39■□□□□ 0.85
CDH6-205ENST00000514738 PRKRIP1Q9H875 184 aaPredicted RBP20.38■□□□□ 0.85
CDH6-205ENST00000514738 CEP120Q8N960 986 aa20.38■□□□□ 0.85
CDH6-205ENST00000514738 PANK3Q9H999 370 aa20.38■□□□□ 0.85
CDH6-205ENST00000514738 NOL7Q9UMY1 257 aaKnown RBP20.38■□□□□ 0.85
CDH6-205ENST00000514738 CLIP1P30622 1438 aa20.36■□□□□ 0.85
CDH6-205ENST00000514738 HS1BP3Q53T59 392 aa20.36■□□□□ 0.85
CDH6-205ENST00000514738 IRF6O14896 467 aa20.35■□□□□ 0.85
CDH6-205ENST00000514738 VPS8Q8N3P4 1428 aa20.35■□□□□ 0.85
CDH6-205ENST00000514738 MYRIPQ8NFW9 859 aa20.35■□□□□ 0.85
CDH6-205ENST00000514738 RSF1Q96T23 1441 aaPredicted RBP20.34■□□□□ 0.85
CDH6-205ENST00000514738 CEP164Q9UPV0 1460 aa20.34■□□□□ 0.85
CDH6-205ENST00000514738 SIRT1Q96EB6 747 aa20.34■□□□□ 0.85
CDH6-205ENST00000514738 NBPF20Q3BBV1 942 aa20.33■□□□□ 0.85
CDH6-205ENST00000514738 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.32■□□□□ 0.84
CDH6-205ENST00000514738 SH3BP1Q9Y3L3 701 aa20.32■□□□□ 0.84
CDH6-205ENST00000514738 KTN1Q86UP2 1357 aaKnown RBP20.32■□□□□ 0.84
CDH6-205ENST00000514738 CT47A1Q5JQC4 288 aaPredicted RBP20.31■□□□□ 0.84
CDH6-205ENST00000514738 JARID2Q92833 1246 aaPredicted RBP20.31■□□□□ 0.84
CDH6-205ENST00000514738 ABCC9O60706 1549 aa20.31■□□□□ 0.84
CDH6-205ENST00000514738 RAB3GAP2Q9H2M9 1393 aa20.3■□□□□ 0.84
CDH6-205ENST00000514738 NASPP49321 788 aaPredicted RBP20.3■□□□□ 0.84
CDH6-205ENST00000514738 OS9Q13438 667 aaPredicted RBP20.3■□□□□ 0.84
CDH6-205ENST00000514738 GABPB1Q06547 395 aaPredicted RBP20.3■□□□□ 0.84
CDH6-205ENST00000514738 HSP90AB3PQ58FF7 597 aa20.29■□□□□ 0.84
CDH6-205ENST00000514738 MYCBPQ99417 103 aaPredicted RBP20.29■□□□□ 0.84
CDH6-205ENST00000514738 TSC1Q92574 1164 aa20.29■□□□□ 0.84
CDH6-205ENST00000514738 CALCOCO1Q9P1Z2 691 aa20.28■□□□□ 0.84
CDH6-205ENST00000514738 CEP83Q9Y592 693 aa20.28■□□□□ 0.84
CDH6-205ENST00000514738 USP19O94966 1318 aa20.28■□□□□ 0.84
CDH6-205ENST00000514738 TNNT3P45378 269 aaPredicted RBP20.27■□□□□ 0.83
CDH6-205ENST00000514738 DDX11L8A8MPP1 907 aa20.26■□□□□ 0.83
CDH6-205ENST00000514738 SEMA3FQ13275 785 aa20.26■□□□□ 0.83
CDH6-205ENST00000514738 FEZ2Q9UHY8 353 aaPredicted RBP20.26■□□□□ 0.83
CDH6-205ENST00000514738 CNTLNQ9NXG0 1405 aa20.26■□□□□ 0.83
CDH6-205ENST00000514738 SLFN14P0C7P3 912 aa20.26■□□□□ 0.83
CDH6-205ENST00000514738 BRPF1P55201 1214 aaPredicted RBP20.26■□□□□ 0.83
CDH6-205ENST00000514738 MPNDQ8N594 471 aa20.25■□□□□ 0.83
CDH6-205ENST00000514738 NINLQ9Y2I6 1382 aa20.25■□□□□ 0.83
CDH6-205ENST00000514738 PPP6R1Q9UPN7 881 aa20.25■□□□□ 0.83
CDH6-205ENST00000514738 SATB1Q01826 763 aa20.24■□□□□ 0.83
CDH6-205ENST00000514738 PDCL2Q8N4E4 241 aa20.24■□□□□ 0.83
CDH6-205ENST00000514738 SMC4Q9NTJ3 1288 aa20.24■□□□□ 0.83
CDH6-205ENST00000514738 GTF2A1P52655 376 aaPredicted RBP20.24■□□□□ 0.83
CDH6-205ENST00000514738 NCAPGQ9BPX3 1015 aa20.24■□□□□ 0.83
CDH6-205ENST00000514738 ZKSCAN5Q9Y2L8 839 aa20.24■□□□□ 0.83
CDH6-205ENST00000514738 GTF2F1P35269 517 aaKnown RBP eCLIP20.23■□□□□ 0.83
CDH6-205ENST00000514738 RCAN3Q9UKA8 241 aa20.23■□□□□ 0.83
CDH6-205ENST00000514738 ABCC8Q09428 1581 aa20.22■□□□□ 0.83
CDH6-205ENST00000514738 U2AF2P26368 475 aaKnown RBP eCLIP20.22■□□□□ 0.83
CDH6-205ENST00000514738 MCM5P33992 734 aa20.22■□□□□ 0.83
CDH6-205ENST00000514738 RRBP1Q9P2E9 1410 aaKnown RBP20.22■□□□□ 0.83
CDH6-205ENST00000514738 CCDC172P0C7W6 258 aa20.22■□□□□ 0.83
CDH6-205ENST00000514738 GOLGA3Q08378 1498 aa20.21■□□□□ 0.83
CDH6-205ENST00000514738 FEZ1Q99689 392 aa20.21■□□□□ 0.83
CDH6-205ENST00000514738 KDM2BQ8NHM5 1336 aa20.21■□□□□ 0.83
CDH6-205ENST00000514738 GOLIM4O00461 696 aa20.2■□□□□ 0.82
CDH6-205ENST00000514738 NOP2P46087 812 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms