RNA–Protein interactions for RNA: ENST00000511822.1

CDH9-204, Transcript of cadherin 9, humanhuman

TSL 4

Gene CDH9, Length 532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-204ENST00000511822 LHX6Q9UPM6 363 aa12.36□□□□□ -0.43
CDH9-204ENST00000511822 OXER1Q8TDS5 423 aa12.35□□□□□ -0.43
CDH9-204ENST00000511822 TBC1D12O60347 775 aa12.34□□□□□ -0.43
CDH9-204ENST00000511822 DNMBPQ6XZF7 1577 aa12.34□□□□□ -0.43
CDH9-204ENST00000511822 PAXIP1Q6ZW49 1069 aaPredicted RBP12.33□□□□□ -0.44
CDH9-204ENST00000511822 UPF1Q92900 1129 aaKnown RBP eCLIP12.32□□□□□ -0.44
CDH9-204ENST00000511822 TARBP1Q13395 1621 aaKnown RBP12.31□□□□□ -0.44
CDH9-204ENST00000511822 SPNS2Q8IVW8 549 aa12.31□□□□□ -0.44
CDH9-204ENST00000511822 CFAP44Q96MT7 982 aa12.31□□□□□ -0.44
CDH9-204ENST00000511822 CHD1O14646 1710 aa12.31□□□□□ -0.44
CDH9-204ENST00000511822 CCDC88BA6NC98 1476 aa12.3□□□□□ -0.44
CDH9-204ENST00000511822 AQRO60306 1485 aaKnown RBP eCLIP12.29□□□□□ -0.44
CDH9-204ENST00000511822 CLASP1Q7Z460 1538 aa12.27□□□□□ -0.45
CDH9-204ENST00000511822 PSDA5PKW4 1024 aaPredicted RBP12.26□□□□□ -0.45
CDH9-204ENST00000511822 POLA1P09884 1462 aaPredicted RBP12.26□□□□□ -0.45
CDH9-204ENST00000511822 WDR97A6NE52 1622 aa12.24□□□□□ -0.45
CDH9-204ENST00000511822 EMILIN3Q9NT22 766 aa12.24□□□□□ -0.45
CDH9-204ENST00000511822 PBX2P40425 430 aa12.22□□□□□ -0.45
CDH9-204ENST00000511822 MMRN1Q13201 1228 aa12.22□□□□□ -0.45
CDH9-204ENST00000511822 POTEEQ6S8J3 1075 aa12.21□□□□□ -0.45
CDH9-204ENST00000511822 CAMK2BQ13554 666 aa12.2□□□□□ -0.46
CDH9-204ENST00000511822 SNAPC4Q5SXM2 1469 aa12.2□□□□□ -0.46
CDH9-204ENST00000511822 MAGI1Q96QZ7 1491 aaPredicted RBP12.2□□□□□ -0.46
CDH9-204ENST00000511822 SYNJ1O43426 1573 aa12.19□□□□□ -0.46
CDH9-204ENST00000511822 EVI5O60447 810 aa12.19□□□□□ -0.46
CDH9-204ENST00000511822 PPP4R3BQ5MIZ7 849 aa12.19□□□□□ -0.46
CDH9-204ENST00000511822 MAP3K9P80192 1104 aa12.18□□□□□ -0.46
CDH9-204ENST00000511822 ANO8Q9HCE9 1232 aaPredicted RBP12.18□□□□□ -0.46
CDH9-204ENST00000511822 LSM11P83369 360 aaKnown RBP eCLIP12.17□□□□□ -0.46
CDH9-204ENST00000511822 AXIN2Q9Y2T1 843 aa12.17□□□□□ -0.46
CDH9-204ENST00000511822 RAD54L2Q9Y4B4 1467 aa12.16□□□□□ -0.46
CDH9-204ENST00000511822 SOGA1O94964 1423 aa12.16□□□□□ -0.46
CDH9-204ENST00000511822 TDRD9Q8NDG6 1382 aaKnown RBP12.16□□□□□ -0.46
CDH9-204ENST00000511822 SYNJ2O15056 1496 aa12.14□□□□□ -0.47
CDH9-204ENST00000511822 ARHGAP33O14559 1287 aa12.14□□□□□ -0.47
CDH9-204ENST00000511822 ANKRD13DQ6ZTN6 518 aa12.14□□□□□ -0.47
CDH9-204ENST00000511822 GRIN2BQ13224 1484 aa12.14□□□□□ -0.47
CDH9-204ENST00000511822 FOSBP53539 338 aa12.13□□□□□ -0.47
CDH9-204ENST00000511822 ZNF454Q8N9F8 522 aa12.13□□□□□ -0.47
CDH9-204ENST00000511822 CHMP7Q8WUX9 453 aaPredicted RBP12.12□□□□□ -0.47
CDH9-204ENST00000511822 GAPVD1Q14C86 1478 aa12.12□□□□□ -0.47
CDH9-204ENST00000511822 FGD5Q6ZNL6 1462 aa12.11□□□□□ -0.47
CDH9-204ENST00000511822 JPH4Q96JJ6 628 aa12.11□□□□□ -0.47
CDH9-204ENST00000511822 DPYSL4O14531 572 aa12.1□□□□□ -0.47
CDH9-204ENST00000511822 PSEN2P49810 448 aa12.09□□□□□ -0.47
CDH9-204ENST00000511822 PTGER2P43116 358 aa12.07□□□□□ -0.48
CDH9-204ENST00000511822 DMRTA1Q5VZB9 504 aa12.07□□□□□ -0.48
CDH9-204ENST00000511822 TSHZ2Q9NRE2 1034 aa12.07□□□□□ -0.48
CDH9-204ENST00000511822 KCNK17Q96T54 332 aa12.06□□□□□ -0.48
CDH9-204ENST00000511822 BCL2L12Q9HB09 334 aa12.06□□□□□ -0.48
CDH9-204ENST00000511822 WDR70Q9NW82 654 aa12.06□□□□□ -0.48
CDH9-204ENST00000511822 CUX1P39880 1505 aa12.06□□□□□ -0.48
CDH9-204ENST00000511822 E2F4Q16254 413 aa12.05□□□□□ -0.48
CDH9-204ENST00000511822 MYT1LQ9UL68 1186 aa12.05□□□□□ -0.48
CDH9-204ENST00000511822 ADGRD1Q6QNK2 874 aa12.04□□□□□ -0.48
CDH9-204ENST00000511822 ZDHHC16Q969W1 377 aa12.04□□□□□ -0.48
CDH9-204ENST00000511822 RNF166Q96A37 237 aaPredicted RBP12.03□□□□□ -0.48
CDH9-204ENST00000511822 KCNH8Q96L42 1107 aa12.03□□□□□ -0.48
CDH9-204ENST00000511822 PCDHGA10Q9Y5H3 936 aa12.03□□□□□ -0.48
CDH9-204ENST00000511822 TK2O00142 265 aa12.02□□□□□ -0.49
CDH9-204ENST00000511822 ADAM33Q9BZ11 813 aa12.02□□□□□ -0.49
CDH9-204ENST00000511822 PHF14O94880 888 aa12□□□□□ -0.49
CDH9-204ENST00000511822 PTPREP23469 700 aa12□□□□□ -0.49
CDH9-204ENST00000511822 PDIA6Q15084 440 aa12□□□□□ -0.49
CDH9-204ENST00000511822 ARIH1Q9Y4X5 557 aaPredicted RBP12□□□□□ -0.49
CDH9-204ENST00000511822 ABCA10Q8WWZ4 1543 aa12□□□□□ -0.49
CDH9-204ENST00000511822 ABCA5Q8WWZ7 1642 aa12□□□□□ -0.49
CDH9-204ENST00000511822 NUP160Q12769 1436 aa11.99□□□□□ -0.49
CDH9-204ENST00000511822 PBRM1Q86U86 1689 aa11.99□□□□□ -0.49
CDH9-204ENST00000511822 GRIN2AQ12879 1464 aa11.97□□□□□ -0.49
CDH9-204ENST00000511822 PLCB2Q00722 1185 aa11.97□□□□□ -0.49
CDH9-204ENST00000511822 TYW1BQ6NUM6 668 aa11.97□□□□□ -0.49
CDH9-204ENST00000511822 FBXW7Q969H0 707 aa11.97□□□□□ -0.49
CDH9-204ENST00000511822 CEP170Q5SW79 1584 aa11.96□□□□□ -0.49
CDH9-204ENST00000511822 ERCC6L2Q5T890 1561 aa11.96□□□□□ -0.49
CDH9-204ENST00000511822 SPDYE16A6NNV3 312 aaPredicted RBP11.96□□□□□ -0.49
CDH9-204ENST00000511822 HRO43593 1189 aa11.96□□□□□ -0.49
CDH9-204ENST00000511822 SLC4A5Q9BY07 1137 aa11.95□□□□□ -0.5
CDH9-204ENST00000511822 SHROOM2Q13796 1616 aa11.94□□□□□ -0.5
CDH9-204ENST00000511822 DDX12PQ92771 950 aa11.94□□□□□ -0.5
CDH9-204ENST00000511822 EPAS1Q99814 870 aa11.94□□□□□ -0.5
CDH9-204ENST00000511822 VPS9D1Q9Y2B5 631 aa11.94□□□□□ -0.5
CDH9-204ENST00000511822 ADAMTS12P58397 1594 aa11.93□□□□□ -0.5
CDH9-204ENST00000511822 ZBED2Q9BTP6 218 aa11.92□□□□□ -0.5
CDH9-204ENST00000511822 PPP1R3GB7ZBB8 358 aa11.9□□□□□ -0.5
CDH9-204ENST00000511822 FHAD1B1AJZ9 1412 aa11.89□□□□□ -0.51
CDH9-204ENST00000511822 KIF13AQ9H1H9 1805 aa11.88□□□□□ -0.51
CDH9-204ENST00000511822 COL9A1P20849 921 aa11.88□□□□□ -0.51
CDH9-204ENST00000511822 NBR1Q14596 966 aa11.88□□□□□ -0.51
CDH9-204ENST00000511822 ABCC10Q5T3U5 1492 aa11.88□□□□□ -0.51
CDH9-204ENST00000511822 WRNQ14191 1432 aaPredicted RBP eCLIP11.86□□□□□ -0.51
CDH9-204ENST00000511822 C6orf132Q5T0Z8 1188 aa11.86□□□□□ -0.51
CDH9-204ENST00000511822 KCNV2Q8TDN2 545 aa11.86□□□□□ -0.51
CDH9-204ENST00000511822 RBM33Q96EV2 1170 aaKnown RBP11.86□□□□□ -0.51
CDH9-204ENST00000511822 MAPKBP1O60336 1514 aa11.86□□□□□ -0.51
CDH9-204ENST00000511822 BHMG1C9JSJ3 638 aaPredicted RBP11.85□□□□□ -0.51
CDH9-204ENST00000511822 EN1Q05925 392 aaPredicted RBP11.85□□□□□ -0.51
CDH9-204ENST00000511822 ARHGEF1Q92888 912 aaKnown RBP11.84□□□□□ -0.51
CDH9-204ENST00000511822 STAC3Q96MF2 364 aa11.84□□□□□ -0.51
CDH9-204ENST00000511822 ERICH3Q5RHP9 1530 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms