RNA–Protein interactions for RNA: ENST00000511783.2

TUSC3-212, Transcript of tumor suppressor candidate 3, humanhuman

TSL 5

Gene TUSC3, Length 1,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-212ENST00000511783 PHF8Q9UPP1 1060 aa10.89□□□□□ -0.67
TUSC3-212ENST00000511783 URB2Q14146 1524 aaKnown RBP10.89□□□□□ -0.67
TUSC3-212ENST00000511783 PTPN5P54829 565 aa10.87□□□□□ -0.67
TUSC3-212ENST00000511783 TK2O00142 265 aa10.86□□□□□ -0.67
TUSC3-212ENST00000511783 HRO43593 1189 aa10.86□□□□□ -0.67
TUSC3-212ENST00000511783 TPRNQ4KMQ1 711 aa10.86□□□□□ -0.67
TUSC3-212ENST00000511783 PCDHGA4Q9Y5G9 962 aa10.85□□□□□ -0.67
TUSC3-212ENST00000511783 Q6ZNB5 142 aa10.84□□□□□ -0.67
TUSC3-212ENST00000511783 NLRP6P59044 892 aa10.83□□□□□ -0.68
TUSC3-212ENST00000511783 NBR1Q14596 966 aa10.83□□□□□ -0.68
TUSC3-212ENST00000511783 TOPBP1Q92547 1522 aa10.83□□□□□ -0.68
TUSC3-212ENST00000511783 DMRTA1Q5VZB9 504 aa10.82□□□□□ -0.68
TUSC3-212ENST00000511783 PSEN2P49810 448 aa10.81□□□□□ -0.68
TUSC3-212ENST00000511783 IFT140Q96RY7 1462 aa10.81□□□□□ -0.68
TUSC3-212ENST00000511783 A0A0G2JS52 829 aa10.8□□□□□ -0.68
TUSC3-212ENST00000511783 DNMBPQ6XZF7 1577 aa10.8□□□□□ -0.68
TUSC3-212ENST00000511783 C2orf72A6NCS6 295 aa10.79□□□□□ -0.68
TUSC3-212ENST00000511783 IFFO2Q5TF58 517 aa10.79□□□□□ -0.68
TUSC3-212ENST00000511783 PSDA5PKW4 1024 aaPredicted RBP10.78□□□□□ -0.68
TUSC3-212ENST00000511783 KCNV2Q8TDN2 545 aa10.78□□□□□ -0.68
TUSC3-212ENST00000511783 SOGA1O94964 1423 aa10.77□□□□□ -0.68
TUSC3-212ENST00000511783 SLC34A2O95436 690 aa10.75□□□□□ -0.69
TUSC3-212ENST00000511783 KIF3CO14782 793 aa10.74□□□□□ -0.69
TUSC3-212ENST00000511783 NCKAP5LQ9HCH0 1330 aa10.74□□□□□ -0.69
TUSC3-212ENST00000511783 POLA1P09884 1462 aaPredicted RBP10.73□□□□□ -0.69
TUSC3-212ENST00000511783 ZNF608Q9ULD9 1512 aaPredicted RBP10.73□□□□□ -0.69
TUSC3-212ENST00000511783 AQRO60306 1485 aaKnown RBP eCLIP10.72□□□□□ -0.69
TUSC3-212ENST00000511783 RAD54L2Q9Y4B4 1467 aa10.72□□□□□ -0.69
TUSC3-212ENST00000511783 FGD5Q6ZNL6 1462 aa10.71□□□□□ -0.69
TUSC3-212ENST00000511783 P3H3Q8IVL6 736 aa10.71□□□□□ -0.69
TUSC3-212ENST00000511783 TDRD9Q8NDG6 1382 aaKnown RBP10.71□□□□□ -0.69
TUSC3-212ENST00000511783 CUX1P39880 1505 aa10.7□□□□□ -0.7
TUSC3-212ENST00000511783 WDR70Q9NW82 654 aa10.7□□□□□ -0.7
TUSC3-212ENST00000511783 WRNQ14191 1432 aaPredicted RBP eCLIP10.68□□□□□ -0.7
TUSC3-212ENST00000511783 CHMP7Q8WUX9 453 aaPredicted RBP10.68□□□□□ -0.7
TUSC3-212ENST00000511783 TARBP1Q13395 1621 aaKnown RBP10.67□□□□□ -0.7
TUSC3-212ENST00000511783 KCNH8Q96L42 1107 aa10.67□□□□□ -0.7
TUSC3-212ENST00000511783 PPP4R3BQ5MIZ7 849 aa10.66□□□□□ -0.7
TUSC3-212ENST00000511783 CRISPLD2Q9H0B8 497 aa10.66□□□□□ -0.7
TUSC3-212ENST00000511783 EIF4G3O43432 1585 aaKnown RBP10.65□□□□□ -0.71
TUSC3-212ENST00000511783 MFSD10Q14728 455 aa10.64□□□□□ -0.71
TUSC3-212ENST00000511783 TMC2Q8TDI7 906 aa10.64□□□□□ -0.71
TUSC3-212ENST00000511783 KCNK17Q96T54 332 aa10.64□□□□□ -0.71
TUSC3-212ENST00000511783 THSD4Q6ZMP0 1018 aa10.63□□□□□ -0.71
TUSC3-212ENST00000511783 E2F4Q16254 413 aa10.62□□□□□ -0.71
TUSC3-212ENST00000511783 LARP6Q9BRS8 491 aaKnown RBP10.62□□□□□ -0.71
TUSC3-212ENST00000511783 GAPVD1Q14C86 1478 aa10.61□□□□□ -0.71
TUSC3-212ENST00000511783 GOLGA8CPA6NN73 597 aa10.61□□□□□ -0.71
TUSC3-212ENST00000511783 ARHGEF1Q92888 912 aaKnown RBP10.61□□□□□ -0.71
TUSC3-212ENST00000511783 VPS9D1Q9Y2B5 631 aa10.61□□□□□ -0.71
TUSC3-212ENST00000511783 GRIN2BQ13224 1484 aa10.61□□□□□ -0.71
TUSC3-212ENST00000511783 TOP2BQ02880 1626 aa10.6□□□□□ -0.71
TUSC3-212ENST00000511783 WDR97A6NE52 1622 aa10.59□□□□□ -0.71
TUSC3-212ENST00000511783 PDE4AP27815 886 aa10.59□□□□□ -0.71
TUSC3-212ENST00000511783 ABCA10Q8WWZ4 1543 aa10.58□□□□□ -0.72
TUSC3-212ENST00000511783 KDM4FA0A1W2PPD8 638 aa10.58□□□□□ -0.72
TUSC3-212ENST00000511783 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.58□□□□□ -0.72
TUSC3-212ENST00000511783 BIVM-ERCC5R4GMW8 1640 aa10.58□□□□□ -0.72
TUSC3-212ENST00000511783 SYNJ1O43426 1573 aa10.57□□□□□ -0.72
TUSC3-212ENST00000511783 SNAPC4Q5SXM2 1469 aa10.57□□□□□ -0.72
TUSC3-212ENST00000511783 WNT2BQ93097 391 aa10.57□□□□□ -0.72
TUSC3-212ENST00000511783 MAGI1Q96QZ7 1491 aaPredicted RBP10.55□□□□□ -0.72
TUSC3-212ENST00000511783 CAMK2BQ13554 666 aa10.55□□□□□ -0.72
TUSC3-212ENST00000511783 DDX27Q96GQ7 796 aaKnown RBP10.55□□□□□ -0.72
TUSC3-212ENST00000511783 SEMA3EO15041 775 aa10.54□□□□□ -0.72
TUSC3-212ENST00000511783 TRAF7Q6Q0C0 670 aa10.54□□□□□ -0.72
TUSC3-212ENST00000511783 CHD1O14646 1710 aa10.53□□□□□ -0.72
TUSC3-212ENST00000511783 SYNJ2O15056 1496 aa10.53□□□□□ -0.72
TUSC3-212ENST00000511783 CYB5RLQ6IPT4 315 aa10.52□□□□□ -0.73
TUSC3-212ENST00000511783 LMOD2Q6P5Q4 547 aa10.52□□□□□ -0.73
TUSC3-212ENST00000511783 PTCD2Q8WV60 388 aaKnown RBP10.52□□□□□ -0.73
TUSC3-212ENST00000511783 ARIH1Q9Y4X5 557 aaPredicted RBP10.52□□□□□ -0.73
TUSC3-212ENST00000511783 PBRM1Q86U86 1689 aa10.51□□□□□ -0.73
TUSC3-212ENST00000511783 TESPA1A2RU30 521 aaPredicted RBP10.51□□□□□ -0.73
TUSC3-212ENST00000511783 LAPTM4AQ15012 233 aa10.51□□□□□ -0.73
TUSC3-212ENST00000511783 GPHNQ9NQX3 736 aaPredicted RBP10.51□□□□□ -0.73
TUSC3-212ENST00000511783 MRPL50Q8N5N7 158 aaKnown RBP10.5□□□□□ -0.73
TUSC3-212ENST00000511783 KIF27Q86VH2 1401 aa10.5□□□□□ -0.73
TUSC3-212ENST00000511783 ABCA5Q8WWZ7 1642 aa10.49□□□□□ -0.73
TUSC3-212ENST00000511783 LCE2BO14633 110 aa10.49□□□□□ -0.73
TUSC3-212ENST00000511783 FHAD1B1AJZ9 1412 aa10.49□□□□□ -0.73
TUSC3-212ENST00000511783 BHMG1C9JSJ3 638 aaPredicted RBP10.47□□□□□ -0.73
TUSC3-212ENST00000511783 PPP1R15BQ5SWA1 713 aa10.47□□□□□ -0.73
TUSC3-212ENST00000511783 ERICH3Q5RHP9 1530 aa10.47□□□□□ -0.73
TUSC3-212ENST00000511783 GFRA3O60609 400 aa10.46□□□□□ -0.73
TUSC3-212ENST00000511783 DSG2Q14126 1118 aa10.46□□□□□ -0.73
TUSC3-212ENST00000511783 RIMBP3CA6NJZ7 1639 aa10.45□□□□□ -0.74
TUSC3-212ENST00000511783 RIMBP3BA6NNM3 1639 aa10.45□□□□□ -0.74
TUSC3-212ENST00000511783 RIMBP3Q9UFD9 1639 aa10.45□□□□□ -0.74
TUSC3-212ENST00000511783 ARHGEF11O15085 1522 aa10.45□□□□□ -0.74
TUSC3-212ENST00000511783 TBC1D12O60347 775 aa10.45□□□□□ -0.74
TUSC3-212ENST00000511783 SLC4A5Q9BY07 1137 aa10.45□□□□□ -0.74
TUSC3-212ENST00000511783 EMILIN3Q9NT22 766 aa10.45□□□□□ -0.74
TUSC3-212ENST00000511783 GRIN2AQ12879 1464 aa10.44□□□□□ -0.74
TUSC3-212ENST00000511783 IGF1RP08069 1367 aa10.44□□□□□ -0.74
TUSC3-212ENST00000511783 ITGBL1O95965 494 aaPredicted RBP10.44□□□□□ -0.74
TUSC3-212ENST00000511783 EEA1Q15075 1411 aa10.43□□□□□ -0.74
TUSC3-212ENST00000511783 JPH4Q96JJ6 628 aa10.42□□□□□ -0.74
TUSC3-212ENST00000511783 CARMIL1Q5VZK9 1371 aa10.41□□□□□ -0.74
TUSC3-212ENST00000511783 FOXK1P85037 733 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms