RNA–Protein interactions for RNA: ENST00000510667.5

LINC01088-206, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 534 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-206ENST00000510667 CUX1P39880 1505 aa12.1□□□□□ -0.47
LINC01088-206ENST00000510667 NUDT7P0C024 238 aa12.09□□□□□ -0.47
LINC01088-206ENST00000510667 PTCD2Q8WV60 388 aaKnown RBP12.09□□□□□ -0.47
LINC01088-206ENST00000510667 UPF1Q92900 1129 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC01088-206ENST00000510667 WDR97A6NE52 1622 aa12.08□□□□□ -0.48
LINC01088-206ENST00000510667 FGD5Q6ZNL6 1462 aa12.08□□□□□ -0.48
LINC01088-206ENST00000510667 SOGA1O94964 1423 aa12.07□□□□□ -0.48
LINC01088-206ENST00000510667 HS3ST6Q96QI5 342 aa12.07□□□□□ -0.48
LINC01088-206ENST00000510667 OXER1Q8TDS5 423 aa12.06□□□□□ -0.48
LINC01088-206ENST00000510667 WRNQ14191 1432 aaPredicted RBP eCLIP12.05□□□□□ -0.48
LINC01088-206ENST00000510667 EMILIN3Q9NT22 766 aa12.05□□□□□ -0.48
LINC01088-206ENST00000510667 ERBB3P21860 1342 aa12.05□□□□□ -0.48
LINC01088-206ENST00000510667 RAD54L2Q9Y4B4 1467 aa12.03□□□□□ -0.48
LINC01088-206ENST00000510667 KDM4FA0A1W2PPD8 638 aa12.02□□□□□ -0.49
LINC01088-206ENST00000510667 VARS2Q5ST30 1063 aaKnown RBP12.02□□□□□ -0.49
LINC01088-206ENST00000510667 CDAN1Q8IWY9 1227 aa12.02□□□□□ -0.49
LINC01088-206ENST00000510667 MAGI1Q96QZ7 1491 aaPredicted RBP12.02□□□□□ -0.49
LINC01088-206ENST00000510667 SYNJ1O43426 1573 aa12.01□□□□□ -0.49
LINC01088-206ENST00000510667 SNAPC4Q5SXM2 1469 aa12.01□□□□□ -0.49
LINC01088-206ENST00000510667 ZNF316A6NFI3 1004 aaPredicted RBP12□□□□□ -0.49
LINC01088-206ENST00000510667 LHX6Q9UPM6 363 aa12□□□□□ -0.49
LINC01088-206ENST00000510667 TDRD9Q8NDG6 1382 aaKnown RBP12□□□□□ -0.49
LINC01088-206ENST00000510667 ABCA10Q8WWZ4 1543 aa12□□□□□ -0.49
LINC01088-206ENST00000510667 CAMK2BQ13554 666 aa11.99□□□□□ -0.49
LINC01088-206ENST00000510667 TBC1D12O60347 775 aa11.98□□□□□ -0.49
LINC01088-206ENST00000510667 TOP2BQ02880 1626 aa11.97□□□□□ -0.49
LINC01088-206ENST00000510667 SYNJ2O15056 1496 aa11.97□□□□□ -0.49
LINC01088-206ENST00000510667 GRIN2BQ13224 1484 aa11.95□□□□□ -0.5
LINC01088-206ENST00000510667 GAPVD1Q14C86 1478 aa11.95□□□□□ -0.5
LINC01088-206ENST00000510667 BIVM-ERCC5R4GMW8 1640 aa11.94□□□□□ -0.5
LINC01088-206ENST00000510667 MAP3K9P80192 1104 aa11.94□□□□□ -0.5
LINC01088-206ENST00000510667 WDR70Q9NW82 654 aa11.94□□□□□ -0.5
LINC01088-206ENST00000510667 HAP1P54257 671 aaPredicted RBP11.93□□□□□ -0.5
LINC01088-206ENST00000510667 CHMP7Q8WUX9 453 aaPredicted RBP11.93□□□□□ -0.5
LINC01088-206ENST00000510667 PCDH10Q9P2E7 1040 aa11.93□□□□□ -0.5
LINC01088-206ENST00000510667 DPYSL4O14531 572 aa11.92□□□□□ -0.5
LINC01088-206ENST00000510667 EVI5O60447 810 aa11.92□□□□□ -0.5
LINC01088-206ENST00000510667 E2F4Q16254 413 aa11.91□□□□□ -0.5
LINC01088-206ENST00000510667 KRTAP3-3Q9BYR6 98 aa11.9□□□□□ -0.5
LINC01088-206ENST00000510667 KRTAP3-2Q9BYR7 98 aa11.9□□□□□ -0.5
LINC01088-206ENST00000510667 PBRM1Q86U86 1689 aa11.89□□□□□ -0.51
LINC01088-206ENST00000510667 ABCA5Q8WWZ7 1642 aa11.89□□□□□ -0.51
LINC01088-206ENST00000510667 ZNF687Q8N1G0 1237 aa11.88□□□□□ -0.51
LINC01088-206ENST00000510667 ANO8Q9HCE9 1232 aaPredicted RBP11.87□□□□□ -0.51
LINC01088-206ENST00000510667 POTEEQ6S8J3 1075 aa11.85□□□□□ -0.51
LINC01088-206ENST00000510667 ERCC6L2Q5T890 1561 aa11.84□□□□□ -0.51
LINC01088-206ENST00000510667 ERICH3Q5RHP9 1530 aa11.83□□□□□ -0.52
LINC01088-206ENST00000510667 FHAD1B1AJZ9 1412 aa11.83□□□□□ -0.52
LINC01088-206ENST00000510667 KIF13AQ9H1H9 1805 aa11.83□□□□□ -0.52
LINC01088-206ENST00000510667 SHROOM2Q13796 1616 aa11.82□□□□□ -0.52
LINC01088-206ENST00000510667 PSDA5PKW4 1024 aaPredicted RBP11.82□□□□□ -0.52
LINC01088-206ENST00000510667 ZNF454Q8N9F8 522 aa11.82□□□□□ -0.52
LINC01088-206ENST00000510667 AXIN2Q9Y2T1 843 aa11.82□□□□□ -0.52
LINC01088-206ENST00000510667 NUP160Q12769 1436 aa11.82□□□□□ -0.52
LINC01088-206ENST00000510667 KIF27Q86VH2 1401 aa11.82□□□□□ -0.52
LINC01088-206ENST00000510667 FOSBP53539 338 aa11.81□□□□□ -0.52
LINC01088-206ENST00000510667 PPP4R3BQ5MIZ7 849 aa11.81□□□□□ -0.52
LINC01088-206ENST00000510667 KCNV2Q8TDN2 545 aa11.81□□□□□ -0.52
LINC01088-206ENST00000510667 KDM2AQ9Y2K7 1162 aa11.81□□□□□ -0.52
LINC01088-206ENST00000510667 GRIN2AQ12879 1464 aa11.81□□□□□ -0.52
LINC01088-206ENST00000510667 ADAMTS12P58397 1594 aa11.8□□□□□ -0.52
LINC01088-206ENST00000510667 CEP170Q5SW79 1584 aa11.8□□□□□ -0.52
LINC01088-206ENST00000510667 PDIA6Q15084 440 aa11.79□□□□□ -0.52
LINC01088-206ENST00000510667 ARIH1Q9Y4X5 557 aaPredicted RBP11.79□□□□□ -0.52
LINC01088-206ENST00000510667 JPH4Q96JJ6 628 aa11.78□□□□□ -0.52
LINC01088-206ENST00000510667 PCDHGA10Q9Y5H3 936 aa11.76□□□□□ -0.53
LINC01088-206ENST00000510667 IGF1RP08069 1367 aa11.76□□□□□ -0.53
LINC01088-206ENST00000510667 PSEN2P49810 448 aa11.75□□□□□ -0.53
LINC01088-206ENST00000510667 DDX12PQ92771 950 aa11.75□□□□□ -0.53
LINC01088-206ENST00000510667 PBX2P40425 430 aa11.74□□□□□ -0.53
LINC01088-206ENST00000510667 ADAM33Q9BZ11 813 aa11.74□□□□□ -0.53
LINC01088-206ENST00000510667 SPDYE16A6NNV3 312 aaPredicted RBP11.73□□□□□ -0.53
LINC01088-206ENST00000510667 LSM11P83369 360 aaKnown RBP eCLIP11.73□□□□□ -0.534e-6■■■■■ 28.9
LINC01088-206ENST00000510667 SPNS2Q8IVW8 549 aa11.73□□□□□ -0.53
LINC01088-206ENST00000510667 ARHGAP33O14559 1287 aa11.72□□□□□ -0.53
LINC01088-206ENST00000510667 DMRTA1Q5VZB9 504 aa11.72□□□□□ -0.53
LINC01088-206ENST00000510667 ZDHHC16Q969W1 377 aa11.72□□□□□ -0.53
LINC01088-206ENST00000510667 KCNK17Q96T54 332 aa11.72□□□□□ -0.53
LINC01088-206ENST00000510667 PHF14O94880 888 aa11.71□□□□□ -0.53
LINC01088-206ENST00000510667 PTGER2P43116 358 aa11.71□□□□□ -0.53
LINC01088-206ENST00000510667 ANKRD13DQ6ZTN6 518 aa11.71□□□□□ -0.53
LINC01088-206ENST00000510667 ARHGEF1Q92888 912 aaKnown RBP11.71□□□□□ -0.53
LINC01088-206ENST00000510667 BCL2L12Q9HB09 334 aa11.71□□□□□ -0.53
LINC01088-206ENST00000510667 ABCC10Q5T3U5 1492 aa11.7□□□□□ -0.54
LINC01088-206ENST00000510667 MAPKBP1O60336 1514 aa11.7□□□□□ -0.54
LINC01088-206ENST00000510667 CARMIL1Q5VZK9 1371 aa11.68□□□□□ -0.54
LINC01088-206ENST00000510667 TYW1BQ6NUM6 668 aa11.68□□□□□ -0.54
LINC01088-206ENST00000510667 P3H3Q8IVL6 736 aa11.68□□□□□ -0.54
LINC01088-206ENST00000510667 VSIG10Q8N0Z9 540 aa11.67□□□□□ -0.54
LINC01088-206ENST00000510667 DIP2BQ9P265 1576 aa11.67□□□□□ -0.54
LINC01088-206ENST00000510667 CUL7Q14999 1698 aa11.66□□□□□ -0.54
LINC01088-206ENST00000510667 GRXCR2A6NFK2 248 aa11.66□□□□□ -0.54
LINC01088-206ENST00000510667 PRIM1P49642 420 aaKnown RBP11.66□□□□□ -0.54
LINC01088-206ENST00000510667 NBR1Q14596 966 aa11.66□□□□□ -0.54
LINC01088-206ENST00000510667 RBM33Q96EV2 1170 aaKnown RBP11.66□□□□□ -0.54
LINC01088-206ENST00000510667 PRG4Q92954 1404 aaPredicted RBP11.66□□□□□ -0.54
LINC01088-206ENST00000510667 PTPREP23469 700 aa11.65□□□□□ -0.54
LINC01088-206ENST00000510667 FBXW7Q969H0 707 aa11.65□□□□□ -0.54
LINC01088-206ENST00000510667 EPAS1Q99814 870 aa11.65□□□□□ -0.54
LINC01088-206ENST00000510667 KIAA0586Q9BVV6 1533 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms