RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 CCDC141Q6ZP82 1450 aa10.29□□□□□ -0.76
PPARGC1A-204ENST00000506055 KDM5DQ9BY66 1539 aa10.29□□□□□ -0.76
PPARGC1A-204ENST00000506055 NBPF1Q3BBV0 1214 aa10.29□□□□□ -0.76
PPARGC1A-204ENST00000506055 FANCIQ9NVI1 1328 aa10.29□□□□□ -0.76
PPARGC1A-204ENST00000506055 CCDC144AA2RUR9 1427 aa10.29□□□□□ -0.76
PPARGC1A-204ENST00000506055 FAM135AQ9P2D6 1515 aa10.29□□□□□ -0.76
PPARGC1A-204ENST00000506055 ARHGEF5Q12774 1597 aa10.29□□□□□ -0.76
PPARGC1A-204ENST00000506055 SAMD9LQ8IVG5 1584 aa10.29□□□□□ -0.76
PPARGC1A-204ENST00000506055 SALL2Q9Y467 1007 aaPredicted RBP10.28□□□□□ -0.76
PPARGC1A-204ENST00000506055 MYBBP1AQ9BQG0 1328 aaKnown RBP10.27□□□□□ -0.76
PPARGC1A-204ENST00000506055 RALBP1Q15311 655 aa10.27□□□□□ -0.76
PPARGC1A-204ENST00000506055 CDC42BPBQ9Y5S2 1711 aa10.27□□□□□ -0.77
PPARGC1A-204ENST00000506055 CCDC136Q96JN2 1154 aa10.26□□□□□ -0.77
PPARGC1A-204ENST00000506055 ARHGAP5Q13017 1502 aa10.26□□□□□ -0.77
PPARGC1A-204ENST00000506055 SYCP2Q9BX26 1530 aa10.26□□□□□ -0.77
PPARGC1A-204ENST00000506055 ERICH6Q7L0X2 663 aa10.25□□□□□ -0.77
PPARGC1A-204ENST00000506055 PREX2Q70Z35 1606 aa10.25□□□□□ -0.77
PPARGC1A-204ENST00000506055 PRAG1Q86YV5 1406 aa10.25□□□□□ -0.77
PPARGC1A-204ENST00000506055 BRD4O60885 1362 aaPredicted RBP10.25□□□□□ -0.77
PPARGC1A-204ENST00000506055 PHF23Q9BUL5 403 aaPredicted RBP10.24□□□□□ -0.77
PPARGC1A-204ENST00000506055 CC2D1BQ5T0F9 858 aaKnown RBP10.23□□□□□ -0.77
PPARGC1A-204ENST00000506055 PLA2R1Q13018 1463 aa10.23□□□□□ -0.77
PPARGC1A-204ENST00000506055 RNF123Q5XPI4 1314 aa10.23□□□□□ -0.77
PPARGC1A-204ENST00000506055 TTC37Q6PGP7 1564 aa10.23□□□□□ -0.77
PPARGC1A-204ENST00000506055 LRPPRCP42704 1394 aaKnown RBP10.23□□□□□ -0.77
PPARGC1A-204ENST00000506055 KTN1Q86UP2 1357 aaKnown RBP10.23□□□□□ -0.77
PPARGC1A-204ENST00000506055 PLEKHH2Q8IVE3 1493 aa10.23□□□□□ -0.77
PPARGC1A-204ENST00000506055 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.23□□□□□ -0.77
PPARGC1A-204ENST00000506055 NLRP13Q86W25 1043 aa10.22□□□□□ -0.77
PPARGC1A-204ENST00000506055 PER1O15534 1290 aaPredicted RBP10.21□□□□□ -0.77
PPARGC1A-204ENST00000506055 TRPM1Q7Z4N2 1603 aa10.21□□□□□ -0.78
PPARGC1A-204ENST00000506055 A2MP01023 1474 aa10.21□□□□□ -0.78
PPARGC1A-204ENST00000506055 PANK3Q9H999 370 aa10.2□□□□□ -0.78
PPARGC1A-204ENST00000506055 DISP3Q9P2K9 1392 aa10.2□□□□□ -0.78
PPARGC1A-204ENST00000506055 TESK2Q96S53 571 aa10.2□□□□□ -0.78
PPARGC1A-204ENST00000506055 CHD1O14646 1710 aa10.2□□□□□ -0.78
PPARGC1A-204ENST00000506055 ERCC6L2Q5T890 1561 aa10.2□□□□□ -0.78
PPARGC1A-204ENST00000506055 PARD3Q8TEW0 1356 aa10.19□□□□□ -0.78
PPARGC1A-204ENST00000506055 E9PCH4 1651 aa10.18□□□□□ -0.78
PPARGC1A-204ENST00000506055 TMF1P82094 1093 aa10.18□□□□□ -0.78
PPARGC1A-204ENST00000506055 EFCAB2Q5VUJ9 269 aa10.18□□□□□ -0.78
PPARGC1A-204ENST00000506055 RCAN3Q9UKA8 241 aa10.18□□□□□ -0.78
PPARGC1A-204ENST00000506055 UNC13BO14795 1591 aa10.18□□□□□ -0.78
PPARGC1A-204ENST00000506055 GPRASP1Q5JY77 1395 aa10.18□□□□□ -0.78
PPARGC1A-204ENST00000506055 RRP1P56182 461 aaKnown RBP10.18□□□□□ -0.78
PPARGC1A-204ENST00000506055 CDCA7LQ96GN5 454 aa10.18□□□□□ -0.78
PPARGC1A-204ENST00000506055 MAST1Q9Y2H9 1570 aa10.17□□□□□ -0.78
PPARGC1A-204ENST00000506055 ABCC2Q92887 1545 aa10.17□□□□□ -0.78
PPARGC1A-204ENST00000506055 MYO5CQ9NQX4 1742 aa10.17□□□□□ -0.78
PPARGC1A-204ENST00000506055 EXOC6Q8TAG9 804 aa10.17□□□□□ -0.78
PPARGC1A-204ENST00000506055 ERBINQ96RT1 1412 aa10.17□□□□□ -0.78
PPARGC1A-204ENST00000506055 DUOX2Q9NRD8 1548 aa10.16□□□□□ -0.78
PPARGC1A-204ENST00000506055 POTEDQ86YR6 584 aa10.16□□□□□ -0.78
PPARGC1A-204ENST00000506055 AFAP1Q8N556 730 aa10.16□□□□□ -0.78
PPARGC1A-204ENST00000506055 IQGAP3Q86VI3 1631 aa10.16□□□□□ -0.78
PPARGC1A-204ENST00000506055 COL17A1Q9UMD9 1497 aaPredicted RBP10.16□□□□□ -0.78
PPARGC1A-204ENST00000506055 PLXNC1O60486 1568 aa10.15□□□□□ -0.78
PPARGC1A-204ENST00000506055 PLCH2O75038 1416 aa10.15□□□□□ -0.78
PPARGC1A-204ENST00000506055 PRDM15P57071 1507 aaPredicted RBP10.15□□□□□ -0.78
PPARGC1A-204ENST00000506055 WASHC2CQ9Y4E1 1318 aa10.15□□□□□ -0.79
PPARGC1A-204ENST00000506055 SHROOM2Q13796 1616 aa10.14□□□□□ -0.79
PPARGC1A-204ENST00000506055 TRAPPC8Q9Y2L5 1435 aa10.14□□□□□ -0.79
PPARGC1A-204ENST00000506055 PDE3BQ13370 1112 aa10.14□□□□□ -0.79
PPARGC1A-204ENST00000506055 SPAG9O60271 1321 aaKnown RBP10.14□□□□□ -0.79
PPARGC1A-204ENST00000506055 PLIN1O60240 522 aa10.13□□□□□ -0.79
PPARGC1A-204ENST00000506055 MYT1LQ9UL68 1186 aa10.13□□□□□ -0.79
PPARGC1A-204ENST00000506055 ATP10AO60312 1499 aa10.12□□□□□ -0.79
PPARGC1A-204ENST00000506055 NOP58Q9Y2X3 529 aaKnown RBP10.12□□□□□ -0.79
PPARGC1A-204ENST00000506055 KNSTRNQ9Y448 316 aa10.12□□□□□ -0.79
PPARGC1A-204ENST00000506055 EIF2AK4Q9P2K8 1649 aaKnown RBP10.12□□□□□ -0.79
PPARGC1A-204ENST00000506055 ADAMTS8Q9UP79 889 aa10.12□□□□□ -0.79
PPARGC1A-204ENST00000506055 PAK3O75914 559 aaPredicted RBP10.11□□□□□ -0.79
PPARGC1A-204ENST00000506055 ANP32AP39687 249 aaKnown RBP10.11□□□□□ -0.79
PPARGC1A-204ENST00000506055 LAMC1P11047 1609 aa10.11□□□□□ -0.79
PPARGC1A-204ENST00000506055 MAGI2Q86UL8 1455 aa10.11□□□□□ -0.79
PPARGC1A-204ENST00000506055 ZCCHC11Q5TAX3 1644 aaKnown RBP10.1□□□□□ -0.79
PPARGC1A-204ENST00000506055 ABCC1P33527 1531 aa10.09□□□□□ -0.79
PPARGC1A-204ENST00000506055 PPP2R1AP30153 589 aa10.08□□□□□ -0.8
PPARGC1A-204ENST00000506055 NBR1Q14596 966 aa10.08□□□□□ -0.8
PPARGC1A-204ENST00000506055 WDR43Q15061 677 aaKnown RBP eCLIP10.08□□□□□ -0.8
PPARGC1A-204ENST00000506055 IPO9Q96P70 1041 aaKnown RBP10.08□□□□□ -0.8
PPARGC1A-204ENST00000506055 KIF3BO15066 747 aa10.08□□□□□ -0.8
PPARGC1A-204ENST00000506055 BLMP54132 1417 aaPredicted RBP10.08□□□□□ -0.8
PPARGC1A-204ENST00000506055 CDCA8Q53HL2 280 aa10.07□□□□□ -0.8
PPARGC1A-204ENST00000506055 NPM2Q86SE8 214 aaKnown RBP10.07□□□□□ -0.8
PPARGC1A-204ENST00000506055 WDR7Q9Y4E6 1490 aa10.07□□□□□ -0.8
PPARGC1A-204ENST00000506055 AMER1Q5JTC6 1135 aaPredicted RBP10.06□□□□□ -0.8
PPARGC1A-204ENST00000506055 ZBTB47Q9UFB7 747 aaPredicted RBP10.06□□□□□ -0.8
PPARGC1A-204ENST00000506055 TCERG1O14776 1098 aaKnown RBP10.06□□□□□ -0.8
PPARGC1A-204ENST00000506055 CRBNQ96SW2 442 aa10.06□□□□□ -0.8
PPARGC1A-204ENST00000506055 MADDQ8WXG6 1647 aa10.05□□□□□ -0.8
PPARGC1A-204ENST00000506055 KANK1Q14678 1352 aa10.05□□□□□ -0.8
PPARGC1A-204ENST00000506055 RTEL1-TNFRSF6BF6WH68 1400 aa10.05□□□□□ -0.8
PPARGC1A-204ENST00000506055 UHRF1BP1LA0JNW5 1464 aa10.05□□□□□ -0.8
PPARGC1A-204ENST00000506055 RNF17Q9BXT8 1623 aaKnown RBP10.05□□□□□ -0.8
PPARGC1A-204ENST00000506055 C20orf194Q5TEA3 1177 aa10.05□□□□□ -0.8
PPARGC1A-204ENST00000506055 BCL11AQ9H165 835 aa10.05□□□□□ -0.8
PPARGC1A-204ENST00000506055 SCAF11Q99590 1463 aaKnown RBP10.05□□□□□ -0.8
PPARGC1A-204ENST00000506055 PDE4AP27815 886 aa10.04□□□□□ -0.8
PPARGC1A-204ENST00000506055 CFAP70Q5T0N1 1121 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms