RNA–Protein interactions for RNA: ENST00000504331.1

OTUD4-204, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 591 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-204ENST00000504331 SMARCA4P51532 1647 aa9.84□□□□□ -0.83
OTUD4-204ENST00000504331 NESP48681 1621 aa9.83□□□□□ -0.84
OTUD4-204ENST00000504331 TRAF7Q6Q0C0 670 aa9.83□□□□□ -0.84
OTUD4-204ENST00000504331 NBPF3Q9H094 633 aa9.83□□□□□ -0.84
OTUD4-204ENST00000504331 UPF1Q92900 1129 aaKnown RBP eCLIP9.81□□□□□ -0.84
OTUD4-204ENST00000504331 LAPTM4AQ15012 233 aa9.8□□□□□ -0.84
OTUD4-204ENST00000504331 CADPSQ9ULU8 1353 aa9.79□□□□□ -0.84
OTUD4-204ENST00000504331 BCAMP50895 628 aa9.79□□□□□ -0.84
OTUD4-204ENST00000504331 ADAM33Q9BZ11 813 aa9.78□□□□□ -0.84
OTUD4-204ENST00000504331 ANKK1Q8NFD2 765 aa9.77□□□□□ -0.85
OTUD4-204ENST00000504331 GFRA3O60609 400 aa9.76□□□□□ -0.85
OTUD4-204ENST00000504331 MRC2Q9UBG0 1479 aa9.76□□□□□ -0.85
OTUD4-204ENST00000504331 JPH4Q96JJ6 628 aa9.75□□□□□ -0.85
OTUD4-204ENST00000504331 KCNC4Q03721 635 aa9.74□□□□□ -0.85
OTUD4-204ENST00000504331 WDR62O43379 1518 aa9.73□□□□□ -0.85
OTUD4-204ENST00000504331 KIF21AQ7Z4S6 1674 aa9.72□□□□□ -0.85
OTUD4-204ENST00000504331 SOWAHBA6NEL2 793 aa9.72□□□□□ -0.85
OTUD4-204ENST00000504331 RGL2O15211 777 aa9.72□□□□□ -0.85
OTUD4-204ENST00000504331 PROX2Q3B8N5 592 aa9.72□□□□□ -0.85
OTUD4-204ENST00000504331 ZDHHC16Q969W1 377 aa9.72□□□□□ -0.85
OTUD4-204ENST00000504331 ANO8Q9HCE9 1232 aaPredicted RBP9.72□□□□□ -0.85
OTUD4-204ENST00000504331 WBP1LQ9NX94 342 aa9.72□□□□□ -0.85
OTUD4-204ENST00000504331 RABGEF1Q9UJ41 708 aa9.72□□□□□ -0.85
OTUD4-204ENST00000504331 ECM2O94769 699 aaPredicted RBP9.7□□□□□ -0.86
OTUD4-204ENST00000504331 PPP1R3GB7ZBB8 358 aa9.69□□□□□ -0.86
OTUD4-204ENST00000504331 NYAP1Q6ZVC0 841 aa9.69□□□□□ -0.86
OTUD4-204ENST00000504331 CEP164Q9UPV0 1460 aa9.67□□□□□ -0.86
OTUD4-204ENST00000504331 NRG2O14511 850 aaPredicted RBP9.67□□□□□ -0.86
OTUD4-204ENST00000504331 COL9A1P20849 921 aa9.66□□□□□ -0.86
OTUD4-204ENST00000504331 ZNF775Q96BV0 537 aaPredicted RBP9.66□□□□□ -0.86
OTUD4-204ENST00000504331 ZFRQ96KR1 1074 aaKnown RBP9.66□□□□□ -0.86
OTUD4-204ENST00000504331 EVI5O60447 810 aa9.65□□□□□ -0.86
OTUD4-204ENST00000504331 LAPTM4BQ86VI4 370 aa9.65□□□□□ -0.86
OTUD4-204ENST00000504331 CRISPLD2Q9H0B8 497 aa9.65□□□□□ -0.86
OTUD4-204ENST00000504331 PPP1R15BQ5SWA1 713 aa9.63□□□□□ -0.87
OTUD4-204ENST00000504331 ZNF787Q6DD87 383 aa9.63□□□□□ -0.87
OTUD4-204ENST00000504331 SLC24A1O60721 1099 aa9.62□□□□□ -0.87
OTUD4-204ENST00000504331 PRKD2Q9BZL6 878 aa9.61□□□□□ -0.87
OTUD4-204ENST00000504331 FANCD2Q9BXW9 1451 aa9.6□□□□□ -0.87
OTUD4-204ENST00000504331 MROH2BQ7Z745 1585 aa9.6□□□□□ -0.87
OTUD4-204ENST00000504331 PKD2Q13563 968 aa9.6□□□□□ -0.87
OTUD4-204ENST00000504331 CFTRP13569 1480 aa9.59□□□□□ -0.87
OTUD4-204ENST00000504331 KIAA1468Q9P260 1216 aa9.59□□□□□ -0.87
OTUD4-204ENST00000504331 SEPT9Q9UHD8 586 aaPredicted RBP9.59□□□□□ -0.87
OTUD4-204ENST00000504331 PCDHGA10Q9Y5H3 936 aa9.59□□□□□ -0.87
OTUD4-204ENST00000504331 HPS5Q9UPZ3 1129 aa9.56□□□□□ -0.88
OTUD4-204ENST00000504331 NCKAP5LQ9HCH0 1330 aa9.56□□□□□ -0.88
OTUD4-204ENST00000504331 TSR3Q9UJK0 312 aaKnown RBP9.55□□□□□ -0.88
OTUD4-204ENST00000504331 ABCC8Q09428 1581 aa9.54□□□□□ -0.88
OTUD4-204ENST00000504331 RIMBP3CA6NJZ7 1639 aa9.54□□□□□ -0.88
OTUD4-204ENST00000504331 RIMBP3BA6NNM3 1639 aa9.54□□□□□ -0.88
OTUD4-204ENST00000504331 RIMBP3Q9UFD9 1639 aa9.54□□□□□ -0.88
OTUD4-204ENST00000504331 IFT140Q96RY7 1462 aa9.53□□□□□ -0.88
OTUD4-204ENST00000504331 TJAP1Q5JTD0 557 aa9.53□□□□□ -0.88
OTUD4-204ENST00000504331 V9GY48 417 aaPredicted RBP9.53□□□□□ -0.88
OTUD4-204ENST00000504331 FAM98CQ17RN3 349 aaKnown RBP9.52□□□□□ -0.89
OTUD4-204ENST00000504331 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.52□□□□□ -0.89
OTUD4-204ENST00000504331 ARHGEF11O15085 1522 aa9.51□□□□□ -0.89
OTUD4-204ENST00000504331 CYB5RLQ6IPT4 315 aa9.51□□□□□ -0.89
OTUD4-204ENST00000504331 ONECUT3O60422 494 aaPredicted RBP9.5□□□□□ -0.89
OTUD4-204ENST00000504331 PPP1R18Q6NYC8 613 aa9.5□□□□□ -0.89
OTUD4-204ENST00000504331 HS6ST3Q8IZP7 471 aa9.5□□□□□ -0.89
OTUD4-204ENST00000504331 LRCH3Q96II8 777 aa9.5□□□□□ -0.89
OTUD4-204ENST00000504331 RSF1Q96T23 1441 aaPredicted RBP9.49□□□□□ -0.89
OTUD4-204ENST00000504331 PDZRN3Q9UPQ7 1066 aa9.49□□□□□ -0.89
OTUD4-204ENST00000504331 TYW1BQ6NUM6 668 aa9.48□□□□□ -0.89
OTUD4-204ENST00000504331 FBXW7Q969H0 707 aa9.48□□□□□ -0.89
OTUD4-204ENST00000504331 URB2Q14146 1524 aaKnown RBP9.47□□□□□ -0.89
OTUD4-204ENST00000504331 TRIM6-TRIM34B2RNG4 842 aa9.47□□□□□ -0.89
OTUD4-204ENST00000504331 MAP3K9P80192 1104 aa9.47□□□□□ -0.89
OTUD4-204ENST00000504331 EMILIN3Q9NT22 766 aa9.46□□□□□ -0.9
OTUD4-204ENST00000504331 PHF14O94880 888 aa9.44□□□□□ -0.9
OTUD4-204ENST00000504331 NKX1-1Q15270 411 aaPredicted RBP9.44□□□□□ -0.9
OTUD4-204ENST00000504331 MTRQ99707 1265 aa9.44□□□□□ -0.9
OTUD4-204ENST00000504331 WIZO95785 1651 aa9.44□□□□□ -0.9
OTUD4-204ENST00000504331 PDE4AP27815 886 aa9.43□□□□□ -0.9
OTUD4-204ENST00000504331 C6orf132Q5T0Z8 1188 aa9.43□□□□□ -0.9
OTUD4-204ENST00000504331 PRDM2Q13029 1718 aa9.42□□□□□ -0.9
OTUD4-204ENST00000504331 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.42□□□□□ -0.9
OTUD4-204ENST00000504331 POTECB2RU33 542 aa9.41□□□□□ -0.9
OTUD4-204ENST00000504331 ZNF516Q92618 1163 aa9.41□□□□□ -0.9
OTUD4-204ENST00000504331 TOP2AP11388 1531 aaKnown RBP9.41□□□□□ -0.9
OTUD4-204ENST00000504331 LCE2AQ5TA79 106 aaPredicted RBP9.4□□□□□ -0.9
OTUD4-204ENST00000504331 TRIM67Q6ZTA4 783 aa9.4□□□□□ -0.9
OTUD4-204ENST00000504331 IL21Q9HBE4 155 aa9.4□□□□□ -0.9
OTUD4-204ENST00000504331 PPP4CP60510 307 aa9.39□□□□□ -0.91
OTUD4-204ENST00000504331 DDX27Q96GQ7 796 aaKnown RBP9.39□□□□□ -0.91
OTUD4-204ENST00000504331 LARP6Q9BRS8 491 aaKnown RBP9.39□□□□□ -0.91
OTUD4-204ENST00000504331 MFSD10Q14728 455 aa9.38□□□□□ -0.91
OTUD4-204ENST00000504331 TOPBP1Q92547 1522 aa9.37□□□□□ -0.91
OTUD4-204ENST00000504331 ZNF608Q9ULD9 1512 aaPredicted RBP9.37□□□□□ -0.91
OTUD4-204ENST00000504331 ARAP1Q96P48 1450 aa9.37□□□□□ -0.91
OTUD4-204ENST00000504331 TSKSQ9UJT2 592 aa9.37□□□□□ -0.91
OTUD4-204ENST00000504331 WDR97A6NE52 1622 aa9.37□□□□□ -0.91
OTUD4-204ENST00000504331 NKX2-3Q8TAU0 364 aa9.36□□□□□ -0.91
OTUD4-204ENST00000504331 MYT1Q01538 1121 aa9.35□□□□□ -0.91
OTUD4-204ENST00000504331 SAMD7Q7Z3H4 446 aa9.34□□□□□ -0.91
OTUD4-204ENST00000504331 DNMBPQ6XZF7 1577 aa9.33□□□□□ -0.92
OTUD4-204ENST00000504331 CHMP7Q8WUX9 453 aaPredicted RBP9.33□□□□□ -0.92
OTUD4-204ENST00000504331 EPAS1Q99814 870 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms