RNA–Protein interactions for RNA: ENST00000493486.1

LCOR-208, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

TSL 3

Gene LCOR, Length 245 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-208ENST00000493486 ZNF454Q8N9F8 522 aa6.48□□□□□ -1.37
LCOR-208ENST00000493486 VPS9D1Q9Y2B5 631 aa6.48□□□□□ -1.37
LCOR-208ENST00000493486 CEP164Q9UPV0 1460 aa6.47□□□□□ -1.37
LCOR-208ENST00000493486 NKX1-1Q15270 411 aaPredicted RBP6.47□□□□□ -1.37
LCOR-208ENST00000493486 OXER1Q8TDS5 423 aa6.47□□□□□ -1.37
LCOR-208ENST00000493486 KCNH8Q96L42 1107 aa6.47□□□□□ -1.37
LCOR-208ENST00000493486 PPP1R15BQ5SWA1 713 aa6.44□□□□□ -1.38
LCOR-208ENST00000493486 CRISPLD2Q9H0B8 497 aa6.43□□□□□ -1.38
LCOR-208ENST00000493486 BCL2L12Q9HB09 334 aa6.43□□□□□ -1.38
LCOR-208ENST00000493486 NCKAP5LQ9HCH0 1330 aa6.42□□□□□ -1.38
LCOR-208ENST00000493486 ZNF608Q9ULD9 1512 aaPredicted RBP6.41□□□□□ -1.38
LCOR-208ENST00000493486 FOSBP53539 338 aa6.41□□□□□ -1.38
LCOR-208ENST00000493486 TOPBP1Q92547 1522 aa6.4□□□□□ -1.38
LCOR-208ENST00000493486 GOLGA8CPA6NN73 597 aa6.4□□□□□ -1.38
LCOR-208ENST00000493486 BHMG1C9JSJ3 638 aaPredicted RBP6.4□□□□□ -1.38
LCOR-208ENST00000493486 PTPREP23469 700 aa6.4□□□□□ -1.38
LCOR-208ENST00000493486 THSD4Q6ZMP0 1018 aa6.4□□□□□ -1.38
LCOR-208ENST00000493486 EVI5O60447 810 aa6.39□□□□□ -1.39
LCOR-208ENST00000493486 WNT2BQ93097 391 aa6.39□□□□□ -1.39
LCOR-208ENST00000493486 ZBED2Q9BTP6 218 aa6.39□□□□□ -1.39
LCOR-208ENST00000493486 SLC4A5Q9BY07 1137 aa6.39□□□□□ -1.39
LCOR-208ENST00000493486 ADAM33Q9BZ11 813 aa6.39□□□□□ -1.39
LCOR-208ENST00000493486 PDE4AP27815 886 aa6.38□□□□□ -1.39
LCOR-208ENST00000493486 MRPL50Q8N5N7 158 aaKnown RBP6.38□□□□□ -1.39
LCOR-208ENST00000493486 JPH4Q96JJ6 628 aa6.38□□□□□ -1.39
LCOR-208ENST00000493486 TARBP1Q13395 1621 aaKnown RBP6.38□□□□□ -1.39
LCOR-208ENST00000493486 DNMBPQ6XZF7 1577 aa6.37□□□□□ -1.39
LCOR-208ENST00000493486 ZDHHC16Q969W1 377 aa6.37□□□□□ -1.39
LCOR-208ENST00000493486 LARP6Q9BRS8 491 aaKnown RBP6.37□□□□□ -1.39
LCOR-208ENST00000493486 ANO8Q9HCE9 1232 aaPredicted RBP6.37□□□□□ -1.39
LCOR-208ENST00000493486 RYDENQ9NUL5 291 aaKnown RBP6.37□□□□□ -1.39
LCOR-208ENST00000493486 EIF4G3O43432 1585 aaKnown RBP6.35□□□□□ -1.39
LCOR-208ENST00000493486 CUX1P39880 1505 aa6.35□□□□□ -1.39
LCOR-208ENST00000493486 POLA1P09884 1462 aaPredicted RBP6.35□□□□□ -1.39
LCOR-208ENST00000493486 SUPT5HO00267 1087 aaKnown RBP6.35□□□□□ -1.39
LCOR-208ENST00000493486 MAP3K9P80192 1104 aa6.35□□□□□ -1.39
LCOR-208ENST00000493486 RAD54L2Q9Y4B4 1467 aa6.34□□□□□ -1.39
LCOR-208ENST00000493486 GTPBP6O43824 516 aaPredicted RBP6.34□□□□□ -1.39
LCOR-208ENST00000493486 PROX2Q3B8N5 592 aa6.34□□□□□ -1.39
LCOR-208ENST00000493486 DDX27Q96GQ7 796 aaKnown RBP6.34□□□□□ -1.39
LCOR-208ENST00000493486 NBPF3Q9H094 633 aa6.34□□□□□ -1.39
LCOR-208ENST00000493486 IFT140Q96RY7 1462 aa6.34□□□□□ -1.4
LCOR-208ENST00000493486 A0A0G2JS52 829 aa6.33□□□□□ -1.4
LCOR-208ENST00000493486 IFFO2Q5TF58 517 aa6.33□□□□□ -1.4
LCOR-208ENST00000493486 EMILIN3Q9NT22 766 aa6.33□□□□□ -1.4
LCOR-208ENST00000493486 AQRO60306 1485 aaKnown RBP eCLIP6.33□□□□□ -1.4
LCOR-208ENST00000493486 COL9A1P20849 921 aa6.32□□□□□ -1.4
LCOR-208ENST00000493486 IRX2Q9BZI1 471 aaPredicted RBP6.32□□□□□ -1.4
LCOR-208ENST00000493486 PCDHGA10Q9Y5H3 936 aa6.32□□□□□ -1.4
LCOR-208ENST00000493486 FGD5Q6ZNL6 1462 aa6.32□□□□□ -1.4
LCOR-208ENST00000493486 WDR97A6NE52 1622 aa6.32□□□□□ -1.4
LCOR-208ENST00000493486 BCAMP50895 628 aa6.31□□□□□ -1.4
LCOR-208ENST00000493486 CHD1O14646 1710 aa6.3□□□□□ -1.4
LCOR-208ENST00000493486 PPP1R3GB7ZBB8 358 aa6.3□□□□□ -1.4
LCOR-208ENST00000493486 RGS20O76081 388 aa6.3□□□□□ -1.4
LCOR-208ENST00000493486 MFSD10Q14728 455 aa6.3□□□□□ -1.4
LCOR-208ENST00000493486 ABCC8Q09428 1581 aa6.3□□□□□ -1.4
LCOR-208ENST00000493486 SYNJ1O43426 1573 aa6.29□□□□□ -1.4
LCOR-208ENST00000493486 CADPS2Q86UW7 1296 aa6.29□□□□□ -1.4
LCOR-208ENST00000493486 ANKK1Q8NFD2 765 aa6.29□□□□□ -1.4
LCOR-208ENST00000493486 RABGEF1Q9UJ41 708 aa6.29□□□□□ -1.4
LCOR-208ENST00000493486 TDRD9Q8NDG6 1382 aaKnown RBP6.29□□□□□ -1.4
LCOR-208ENST00000493486 SOGA1O94964 1423 aa6.27□□□□□ -1.41
LCOR-208ENST00000493486 TYW1BQ6NUM6 668 aa6.27□□□□□ -1.41
LCOR-208ENST00000493486 KIAA1468Q9P260 1216 aa6.27□□□□□ -1.41
LCOR-208ENST00000493486 RIMBP3CA6NJZ7 1639 aa6.27□□□□□ -1.41
LCOR-208ENST00000493486 RIMBP3BA6NNM3 1639 aa6.27□□□□□ -1.41
LCOR-208ENST00000493486 RIMBP3Q9UFD9 1639 aa6.27□□□□□ -1.41
LCOR-208ENST00000493486 ABCA5Q8WWZ7 1642 aa6.26□□□□□ -1.41
LCOR-208ENST00000493486 BIVM-ERCC5R4GMW8 1640 aa6.26□□□□□ -1.41
LCOR-208ENST00000493486 SEPT9Q9UHD8 586 aaPredicted RBP6.26□□□□□ -1.41
LCOR-208ENST00000493486 SOWAHBA6NEL2 793 aa6.25□□□□□ -1.41
LCOR-208ENST00000493486 PHF14O94880 888 aa6.25□□□□□ -1.41
LCOR-208ENST00000493486 FBXW7Q969H0 707 aa6.25□□□□□ -1.41
LCOR-208ENST00000493486 ZFRQ96KR1 1074 aaKnown RBP6.25□□□□□ -1.41
LCOR-208ENST00000493486 WBP1LQ9NX94 342 aa6.25□□□□□ -1.41
LCOR-208ENST00000493486 SNAPC4Q5SXM2 1469 aa6.25□□□□□ -1.41
LCOR-208ENST00000493486 PBRM1Q86U86 1689 aa6.25□□□□□ -1.41
LCOR-208ENST00000493486 TOP2BQ02880 1626 aa6.25□□□□□ -1.41
LCOR-208ENST00000493486 ITGBL1O95965 494 aaPredicted RBP6.24□□□□□ -1.41
LCOR-208ENST00000493486 RBM33Q96EV2 1170 aaKnown RBP6.24□□□□□ -1.41
LCOR-208ENST00000493486 ARHGEF11O15085 1522 aa6.24□□□□□ -1.41
LCOR-208ENST00000493486 DPYSL4O14531 572 aa6.23□□□□□ -1.41
LCOR-208ENST00000493486 C6orf132Q5T0Z8 1188 aa6.23□□□□□ -1.41
LCOR-208ENST00000493486 LAPTM4BQ86VI4 370 aa6.23□□□□□ -1.41
LCOR-208ENST00000493486 CLASP1Q7Z460 1538 aa6.23□□□□□ -1.41
LCOR-208ENST00000493486 ABCA10Q8WWZ4 1543 aa6.23□□□□□ -1.41
LCOR-208ENST00000493486 DDX12PQ92771 950 aa6.22□□□□□ -1.41
LCOR-208ENST00000493486 WRNQ14191 1432 aaPredicted RBP eCLIP6.21□□□□□ -1.42
LCOR-208ENST00000493486 GRIN2BQ13224 1484 aa6.21□□□□□ -1.42
LCOR-208ENST00000493486 GAPVD1Q14C86 1478 aa6.21□□□□□ -1.42
LCOR-208ENST00000493486 TRIM6-TRIM34B2RNG4 842 aa6.2□□□□□ -1.42
LCOR-208ENST00000493486 KCNC4Q03721 635 aa6.2□□□□□ -1.42
LCOR-208ENST00000493486 Q6ZNB5 142 aa6.2□□□□□ -1.42
LCOR-208ENST00000493486 EPAS1Q99814 870 aa6.2□□□□□ -1.42
LCOR-208ENST00000493486 HPS5Q9UPZ3 1129 aa6.2□□□□□ -1.42
LCOR-208ENST00000493486 ARAP1Q96P48 1450 aa6.2□□□□□ -1.42
LCOR-208ENST00000493486 MAGI1Q96QZ7 1491 aaPredicted RBP6.2□□□□□ -1.42
LCOR-208ENST00000493486 ERCC6L2Q5T890 1561 aa6.19□□□□□ -1.42
LCOR-208ENST00000493486 FAM98CQ17RN3 349 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms