RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 IGF1RP08069 1367 aa8□□□□□ -1.13
EPCAM-206ENST00000490733 TMC2Q8TDI7 906 aa8□□□□□ -1.13
EPCAM-206ENST00000490733 GAPVD1Q14C86 1478 aa8□□□□□ -1.13
EPCAM-206ENST00000490733 LOC105371045A0A1W2PR82 267 aa7.99□□□□□ -1.13
EPCAM-206ENST00000490733 PRXQ9BXM0 1461 aa7.99□□□□□ -1.13
EPCAM-206ENST00000490733 RGS20O76081 388 aa7.98□□□□□ -1.13
EPCAM-206ENST00000490733 BBXQ8WY36 941 aaPredicted RBP7.98□□□□□ -1.13
EPCAM-206ENST00000490733 KIF21BO75037 1637 aa7.98□□□□□ -1.13
EPCAM-206ENST00000490733 ERICH3Q5RHP9 1530 aa7.98□□□□□ -1.13
EPCAM-206ENST00000490733 CUL7Q14999 1698 aa7.96□□□□□ -1.13
EPCAM-206ENST00000490733 RAPGEF2Q9Y4G8 1499 aa7.96□□□□□ -1.13
EPCAM-206ENST00000490733 RIMBP2O15034 1052 aa7.96□□□□□ -1.14
EPCAM-206ENST00000490733 GRIN2BQ13224 1484 aa7.95□□□□□ -1.14
EPCAM-206ENST00000490733 GPR153Q6NV75 609 aa7.95□□□□□ -1.14
EPCAM-206ENST00000490733 GPHNQ9NQX3 736 aaPredicted RBP7.95□□□□□ -1.14
EPCAM-206ENST00000490733 ADAMTS12P58397 1594 aa7.94□□□□□ -1.14
EPCAM-206ENST00000490733 ZSWIM6Q9HCJ5 1215 aa7.94□□□□□ -1.14
EPCAM-206ENST00000490733 CARMIL1Q5VZK9 1371 aa7.94□□□□□ -1.14
EPCAM-206ENST00000490733 FOXK1P85037 733 aa7.93□□□□□ -1.14
EPCAM-206ENST00000490733 DSG2Q14126 1118 aa7.93□□□□□ -1.14
EPCAM-206ENST00000490733 CRISPLD2Q9H0B8 497 aa7.93□□□□□ -1.14
EPCAM-206ENST00000490733 GOLGA3Q08378 1498 aa7.93□□□□□ -1.14
EPCAM-206ENST00000490733 SNAPC4Q5SXM2 1469 aa7.93□□□□□ -1.14
EPCAM-206ENST00000490733 ARSIQ5FYB1 569 aa7.92□□□□□ -1.14
EPCAM-206ENST00000490733 PLPP6Q8IY26 295 aa7.92□□□□□ -1.14
EPCAM-206ENST00000490733 KHSRPQ92945 711 aaKnown RBP eCLIP7.92□□□□□ -1.144e-6■■■■□ 22.9
EPCAM-206ENST00000490733 NCKAP5LQ9HCH0 1330 aa7.92□□□□□ -1.14
EPCAM-206ENST00000490733 FHAD1B1AJZ9 1412 aa7.91□□□□□ -1.14
EPCAM-206ENST00000490733 MAGI1Q96QZ7 1491 aaPredicted RBP7.91□□□□□ -1.14
EPCAM-206ENST00000490733 SLC34A2O95436 690 aa7.9□□□□□ -1.14
EPCAM-206ENST00000490733 CADPS2Q86UW7 1296 aa7.9□□□□□ -1.14
EPCAM-206ENST00000490733 SPRYD3Q8NCJ5 442 aa7.89□□□□□ -1.15
EPCAM-206ENST00000490733 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.89□□□□□ -1.15
EPCAM-206ENST00000490733 SYNJ2O15056 1496 aa7.88□□□□□ -1.15
EPCAM-206ENST00000490733 TNIKQ9UKE5 1360 aa7.88□□□□□ -1.15
EPCAM-206ENST00000490733 PDE4AP27815 886 aa7.88□□□□□ -1.15
EPCAM-206ENST00000490733 PCDHGA4Q9Y5G9 962 aa7.88□□□□□ -1.15
EPCAM-206ENST00000490733 CHD1O14646 1710 aa7.88□□□□□ -1.15
EPCAM-206ENST00000490733 CTTNBP2Q8WZ74 1663 aa7.88□□□□□ -1.15
EPCAM-206ENST00000490733 LSM11P83369 360 aaKnown RBP eCLIP7.87□□□□□ -1.15
EPCAM-206ENST00000490733 PPP1R15BQ5SWA1 713 aa7.87□□□□□ -1.15
EPCAM-206ENST00000490733 PAXIP1Q6ZW49 1069 aaPredicted RBP7.87□□□□□ -1.15
EPCAM-206ENST00000490733 GRIN2AQ12879 1464 aa7.87□□□□□ -1.15
EPCAM-206ENST00000490733 NUDT7P0C024 238 aa7.86□□□□□ -1.15
EPCAM-206ENST00000490733 UBTFP17480 764 aaKnown RBP7.86□□□□□ -1.15
EPCAM-206ENST00000490733 Q6ZNB5 142 aa7.86□□□□□ -1.15
EPCAM-206ENST00000490733 CFAP44Q96MT7 982 aa7.86□□□□□ -1.15
EPCAM-206ENST00000490733 LARP6Q9BRS8 491 aaKnown RBP7.86□□□□□ -1.15
EPCAM-206ENST00000490733 CEP170Q5SW79 1584 aa7.85□□□□□ -1.15
EPCAM-206ENST00000490733 PTCD2Q8WV60 388 aaKnown RBP7.85□□□□□ -1.15
EPCAM-206ENST00000490733 CEP162Q5TB80 1403 aa7.84□□□□□ -1.15
EPCAM-206ENST00000490733 ZNF316A6NFI3 1004 aaPredicted RBP7.83□□□□□ -1.16
EPCAM-206ENST00000490733 MFSD10Q14728 455 aa7.83□□□□□ -1.16
EPCAM-206ENST00000490733 DDX27Q96GQ7 796 aaKnown RBP7.83□□□□□ -1.16
EPCAM-206ENST00000490733 NUP160Q12769 1436 aa7.83□□□□□ -1.16
EPCAM-206ENST00000490733 CHMP7Q8WUX9 453 aaPredicted RBP7.82□□□□□ -1.16
EPCAM-206ENST00000490733 KDM4FA0A1W2PPD8 638 aa7.81□□□□□ -1.16
EPCAM-206ENST00000490733 OXER1Q8TDS5 423 aa7.81□□□□□ -1.16
EPCAM-206ENST00000490733 UPF1Q92900 1129 aaKnown RBP eCLIP7.81□□□□□ -1.16
EPCAM-206ENST00000490733 LHX6Q9UPM6 363 aa7.81□□□□□ -1.16
EPCAM-206ENST00000490733 IQGAP2Q13576 1575 aa7.8□□□□□ -1.16
EPCAM-206ENST00000490733 KIAA0586Q9BVV6 1533 aa7.8□□□□□ -1.16
EPCAM-206ENST00000490733 ARHGAP35Q9NRY4 1499 aa7.8□□□□□ -1.16
EPCAM-206ENST00000490733 CLIP1P30622 1438 aa7.79□□□□□ -1.16
EPCAM-206ENST00000490733 SAMD9Q5K651 1589 aa7.79□□□□□ -1.16
EPCAM-206ENST00000490733 TBC1D12O60347 775 aa7.78□□□□□ -1.16
EPCAM-206ENST00000490733 RANGAP1P46060 587 aaPredicted RBP7.78□□□□□ -1.16
EPCAM-206ENST00000490733 ARAP1Q96P48 1450 aa7.78□□□□□ -1.16
EPCAM-206ENST00000490733 CLASP1Q7Z460 1538 aa7.78□□□□□ -1.16
EPCAM-206ENST00000490733 UGGT2Q9NYU1 1516 aa7.78□□□□□ -1.16
EPCAM-206ENST00000490733 EMILIN3Q9NT22 766 aa7.77□□□□□ -1.17
EPCAM-206ENST00000490733 SHROOM2Q13796 1616 aa7.76□□□□□ -1.17
EPCAM-206ENST00000490733 EFCAB5A4FU69 1503 aa7.76□□□□□ -1.17
EPCAM-206ENST00000490733 DISP1Q96F81 1524 aa7.76□□□□□ -1.17
EPCAM-206ENST00000490733 KIAA0556O60303 1618 aa7.74□□□□□ -1.17
EPCAM-206ENST00000490733 ERCC6L2Q5T890 1561 aa7.73□□□□□ -1.17
EPCAM-206ENST00000490733 FHOD3Q2V2M9 1422 aa7.73□□□□□ -1.17
EPCAM-206ENST00000490733 CAMK2BQ13554 666 aa7.73□□□□□ -1.17
EPCAM-206ENST00000490733 POTEEQ6S8J3 1075 aa7.73□□□□□ -1.17
EPCAM-206ENST00000490733 JPH4Q96JJ6 628 aa7.73□□□□□ -1.17
EPCAM-206ENST00000490733 P3H3Q8IVL6 736 aa7.72□□□□□ -1.17
EPCAM-206ENST00000490733 VPS8Q8N3P4 1428 aa7.71□□□□□ -1.17
EPCAM-206ENST00000490733 PSDA5PKW4 1024 aaPredicted RBP7.71□□□□□ -1.18
EPCAM-206ENST00000490733 EVI5O60447 810 aa7.71□□□□□ -1.18
EPCAM-206ENST00000490733 PBX2P40425 430 aa7.71□□□□□ -1.18
EPCAM-206ENST00000490733 MAP3K9P80192 1104 aa7.71□□□□□ -1.18
EPCAM-206ENST00000490733 TSHZ2Q9NRE2 1034 aa7.71□□□□□ -1.18
EPCAM-206ENST00000490733 ANO8Q9HCE9 1232 aaPredicted RBP7.7□□□□□ -1.18
EPCAM-206ENST00000490733 AXIN2Q9Y2T1 843 aa7.7□□□□□ -1.18
EPCAM-206ENST00000490733 PRG4Q92954 1404 aaPredicted RBP7.69□□□□□ -1.18
EPCAM-206ENST00000490733 LRRIQ1Q96JM4 1722 aa7.69□□□□□ -1.18
EPCAM-206ENST00000490733 PCF11O94913 1555 aaKnown RBP7.69□□□□□ -1.18
EPCAM-206ENST00000490733 IFFO2Q5TF58 517 aa7.69□□□□□ -1.18
EPCAM-206ENST00000490733 DPYSL4O14531 572 aa7.68□□□□□ -1.18
EPCAM-206ENST00000490733 PPP4R3BQ5MIZ7 849 aa7.68□□□□□ -1.18
EPCAM-206ENST00000490733 A0A0G2JS52 829 aa7.67□□□□□ -1.18
EPCAM-206ENST00000490733 ZNF454Q8N9F8 522 aa7.67□□□□□ -1.18
EPCAM-206ENST00000490733 CARMIL2Q6F5E8 1435 aa7.67□□□□□ -1.18
EPCAM-206ENST00000490733 FOSBP53539 338 aa7.66□□□□□ -1.18
EPCAM-206ENST00000490733 WDR70Q9NW82 654 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms