RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 ZDHHC16Q969W1 377 aa8.28□□□□□ -1.08
PRPF4-203ENST00000488937 JPH4Q96JJ6 628 aa8.28□□□□□ -1.08
PRPF4-203ENST00000488937 ADAM33Q9BZ11 813 aa8.28□□□□□ -1.08
PRPF4-203ENST00000488937 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.28□□□□□ -1.08
PRPF4-203ENST00000488937 GPHNQ9NQX3 736 aaPredicted RBP8.27□□□□□ -1.09
PRPF4-203ENST00000488937 PPP1R3GB7ZBB8 358 aa8.26□□□□□ -1.09
PRPF4-203ENST00000488937 PROX2Q3B8N5 592 aa8.26□□□□□ -1.09
PRPF4-203ENST00000488937 TRIM67Q6ZTA4 783 aa8.25□□□□□ -1.09
PRPF4-203ENST00000488937 DSG2Q14126 1118 aa8.24□□□□□ -1.09
PRPF4-203ENST00000488937 HPS5Q9UPZ3 1129 aa8.24□□□□□ -1.09
PRPF4-203ENST00000488937 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.23□□□□□ -1.09
PRPF4-203ENST00000488937 STK24Q9Y6E0 443 aa8.23□□□□□ -1.09
PRPF4-203ENST00000488937 TAOK2Q9UL54 1235 aa8.22□□□□□ -1.09
PRPF4-203ENST00000488937 NFX1Q12986 1120 aaKnown RBP8.21□□□□□ -1.1
PRPF4-203ENST00000488937 ANO8Q9HCE9 1232 aaPredicted RBP8.21□□□□□ -1.1
PRPF4-203ENST00000488937 LRCH3Q96II8 777 aa8.2□□□□□ -1.1
PRPF4-203ENST00000488937 IL21Q9HBE4 155 aa8.2□□□□□ -1.1
PRPF4-203ENST00000488937 KIAA1468Q9P260 1216 aa8.19□□□□□ -1.1
PRPF4-203ENST00000488937 FAM181BA6NEQ2 426 aa8.18□□□□□ -1.1
PRPF4-203ENST00000488937 ONECUT3O60422 494 aaPredicted RBP8.18□□□□□ -1.1
PRPF4-203ENST00000488937 PRR20EP86478 221 aa8.17□□□□□ -1.1
PRPF4-203ENST00000488937 PRR20CP86479 221 aa8.17□□□□□ -1.1
PRPF4-203ENST00000488937 PRR20DP86480 221 aa8.17□□□□□ -1.1
PRPF4-203ENST00000488937 PRR20BP86481 221 aa8.17□□□□□ -1.1
PRPF4-203ENST00000488937 PRR20AP86496 221 aa8.17□□□□□ -1.1
PRPF4-203ENST00000488937 FAM98CQ17RN3 349 aaKnown RBP8.17□□□□□ -1.1
PRPF4-203ENST00000488937 UPF1Q92900 1129 aaKnown RBP eCLIP8.17□□□□□ -1.1
PRPF4-203ENST00000488937 PPP1R37O75864 691 aa8.16□□□□□ -1.1
PRPF4-203ENST00000488937 COL9A1P20849 921 aa8.16□□□□□ -1.1
PRPF4-203ENST00000488937 MTRQ99707 1265 aa8.16□□□□□ -1.1
PRPF4-203ENST00000488937 GGCXP38435 758 aa8.15□□□□□ -1.1
PRPF4-203ENST00000488937 AAASQ9NRG9 546 aa8.15□□□□□ -1.1
PRPF4-203ENST00000488937 SEPT9Q9UHD8 586 aaPredicted RBP8.15□□□□□ -1.1
PRPF4-203ENST00000488937 PPP4CP60510 307 aa8.14□□□□□ -1.11
PRPF4-203ENST00000488937 TMUB1Q9BVT8 246 aa8.13□□□□□ -1.11
PRPF4-203ENST00000488937 FAM187AA6NFU0 413 aa8.12□□□□□ -1.11
PRPF4-203ENST00000488937 ST8SIA5O15466 376 aa8.12□□□□□ -1.11
PRPF4-203ENST00000488937 STK25O00506 426 aa8.1□□□□□ -1.11
PRPF4-203ENST00000488937 ZNF516Q92618 1163 aa8.09□□□□□ -1.11
PRPF4-203ENST00000488937 EVI5O60447 810 aa8.08□□□□□ -1.12
PRPF4-203ENST00000488937 SLC19A1P41440 591 aa8.08□□□□□ -1.12
PRPF4-203ENST00000488937 LCE2CQ5TA81 110 aa8.07□□□□□ -1.12
PRPF4-203ENST00000488937 ZNF598Q86UK7 904 aaKnown RBP8.06□□□□□ -1.12
PRPF4-203ENST00000488937 C11orf95C9JLR9 678 aaPredicted RBP8.05□□□□□ -1.12
PRPF4-203ENST00000488937 CRIPAKQ8N1N5 446 aa8.05□□□□□ -1.12
PRPF4-203ENST00000488937 NKX2-3Q8TAU0 364 aa8.05□□□□□ -1.12
PRPF4-203ENST00000488937 SPRYD7Q5W111 196 aa8.04□□□□□ -1.12
PRPF4-203ENST00000488937 PCDHGA10Q9Y5H3 936 aa8.04□□□□□ -1.12
PRPF4-203ENST00000488937 TRIM6-TRIM34B2RNG4 842 aa8.03□□□□□ -1.12
PRPF4-203ENST00000488937 FBXW7Q969H0 707 aa8.03□□□□□ -1.12
PRPF4-203ENST00000488937 EMID1Q96A84 441 aaPredicted RBP8.02□□□□□ -1.13
PRPF4-203ENST00000488937 GMPR2Q9P2T1 348 aaKnown RBP8.02□□□□□ -1.13
PRPF4-203ENST00000488937 GDF9O60383 454 aa8□□□□□ -1.13
PRPF4-203ENST00000488937 TERTO14746 1132 aaKnown RBP7.99□□□□□ -1.13
PRPF4-203ENST00000488937 DACH1Q9UI36 760 aa7.99□□□□□ -1.13
PRPF4-203ENST00000488937 TNFRSF10AO00220 468 aa7.97□□□□□ -1.13
PRPF4-203ENST00000488937 SLC24A1O60721 1099 aa7.97□□□□□ -1.13
PRPF4-203ENST00000488937 TYW1BQ6NUM6 668 aa7.97□□□□□ -1.13
PRPF4-203ENST00000488937 ZNF697Q5TEC3 545 aa7.96□□□□□ -1.14
PRPF4-203ENST00000488937 ZSCAN1Q8NBB4 408 aa7.96□□□□□ -1.14
PRPF4-203ENST00000488937 LORP23490 312 aaPredicted RBP7.95□□□□□ -1.14
PRPF4-203ENST00000488937 RNF223E7ERA6 249 aa7.94□□□□□ -1.14
PRPF4-203ENST00000488937 PPP1R15BQ5SWA1 713 aa7.94□□□□□ -1.14
PRPF4-203ENST00000488937 PHF14O94880 888 aa7.93□□□□□ -1.14
PRPF4-203ENST00000488937 SAMD7Q7Z3H4 446 aa7.93□□□□□ -1.14
PRPF4-203ENST00000488937 AVPP01185 164 aa7.92□□□□□ -1.14
PRPF4-203ENST00000488937 C6orf132Q5T0Z8 1188 aa7.92□□□□□ -1.14
PRPF4-203ENST00000488937 KRTAP4-8Q9BYQ9 185 aa7.92□□□□□ -1.14
PRPF4-203ENST00000488937 AXIN1O15169 862 aa7.91□□□□□ -1.14
PRPF4-203ENST00000488937 APLP1P51693 650 aa7.91□□□□□ -1.14
PRPF4-203ENST00000488937 CTC1Q2NKJ3 1217 aa7.9□□□□□ -1.14
PRPF4-203ENST00000488937 PACS2Q86VP3 889 aa7.9□□□□□ -1.14
PRPF4-203ENST00000488937 CRISPLD2Q9H0B8 497 aa7.9□□□□□ -1.14
PRPF4-203ENST00000488937 LIAT1Q6ZQX7 453 aa7.89□□□□□ -1.15
PRPF4-203ENST00000488937 ANKLE1Q8NAG6 615 aa7.89□□□□□ -1.15
PRPF4-203ENST00000488937 MAP3K9P80192 1104 aa7.88□□□□□ -1.15
PRPF4-203ENST00000488937 ZPR1O75312 459 aa7.87□□□□□ -1.15
PRPF4-203ENST00000488937 SMCPP49901 116 aaPredicted RBP7.87□□□□□ -1.15
PRPF4-203ENST00000488937 COPS2P61201 443 aa7.87□□□□□ -1.15
PRPF4-203ENST00000488937 XP32Q5T750 250 aa7.87□□□□□ -1.15
PRPF4-203ENST00000488937 LMOD2Q6P5Q4 547 aa7.87□□□□□ -1.15
PRPF4-203ENST00000488937 KCTD17Q8N5Z5 321 aa7.86□□□□□ -1.15
PRPF4-203ENST00000488937 ECM2O94769 699 aaPredicted RBP7.84□□□□□ -1.15
PRPF4-203ENST00000488937 TSKSQ9UJT2 592 aa7.84□□□□□ -1.15
PRPF4-203ENST00000488937 SLC16A10Q8TF71 515 aa7.83□□□□□ -1.16
PRPF4-203ENST00000488937 EPAS1Q99814 870 aa7.83□□□□□ -1.16
PRPF4-203ENST00000488937 SNRPBP14678 240 aaKnown RBP7.82□□□□□ -1.16
PRPF4-203ENST00000488937 KCNMA1Q12791 1236 aa7.82□□□□□ -1.16
PRPF4-203ENST00000488937 NECTIN2Q92692 538 aa7.82□□□□□ -1.16
PRPF4-203ENST00000488937 GMPRP36959 345 aa7.81□□□□□ -1.16
PRPF4-203ENST00000488937 PKD2L1Q9P0L9 805 aa7.81□□□□□ -1.16
PRPF4-203ENST00000488937 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.8□□□□□ -1.16
PRPF4-203ENST00000488937 TRIM47Q96LD4 638 aa7.8□□□□□ -1.16
PRPF4-203ENST00000488937 KRTAP9-2Q9BYQ4 174 aa7.78□□□□□ -1.16
PRPF4-203ENST00000488937 SENP2Q9HC62 589 aa7.78□□□□□ -1.16
PRPF4-203ENST00000488937 TOR4AQ9NXH8 423 aa7.78□□□□□ -1.16
PRPF4-203ENST00000488937 RNF40O75150 1001 aa7.77□□□□□ -1.17
PRPF4-203ENST00000488937 GSK3AP49840 483 aa7.77□□□□□ -1.17
PRPF4-203ENST00000488937 HDGFP51858 240 aaKnown RBP7.77□□□□□ -1.17
PRPF4-203ENST00000488937 SMAPO00193 183 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms